Experiment set9IT047 for Klebsiella michiganensis M5al

Compare to:

RCH2_defined_Glucose_noNitrogen in Eppendorf tube with sand

200 most important genes:

  gene name fitness t score description  
BWI76_RS26085 -5.7 -3.9 3-dehydroquinate synthase compare
BWI76_RS09645 -5.0 -2.0 thioredoxin-disulfide reductase compare
BWI76_RS04465 -4.8 -5.4 carbamoyl-phosphate synthase small subunit compare
BWI76_RS00400 -4.7 -3.2 glutamine synthetase compare
BWI76_RS23920 -4.4 -5.4 D-3-phosphoglycerate dehydrogenase compare
BWI76_RS20895 -4.1 -5.3 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS04160 -3.9 -5.0 phosphoserine phosphatase compare
BWI76_RS11965 -3.9 -3.0 orotidine-5'-phosphate decarboxylase compare
BWI76_RS00390 -3.9 -7.6 two-component system sensor histidine kinase NtrB compare
BWI76_RS09910 -3.8 -14.5 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS20965 -3.8 -5.5 phosphoribosylformylglycinamidine cyclo-ligase compare
BWI76_RS07070 -3.7 -5.9 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS20435 -3.7 -2.0 chorismate synthase compare
BWI76_RS05200 -3.7 -4.4 bifunctional uridylyltransferase/uridylyl-removing protein compare
BWI76_RS04470 -3.7 -9.4 carbamoyl phosphate synthase large subunit compare
BWI76_RS27385 -3.6 -5.8 orotate phosphoribosyltransferase compare
BWI76_RS01615 -3.6 -11.5 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS09755 -3.6 -7.7 phosphoserine transaminase compare
BWI76_RS09760 -3.3 -3.3 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS04645 -3.3 -5.0 3-dehydroquinase compare
BWI76_RS23230 -3.3 -3.9 exodeoxyribonuclease V subunit beta compare
BWI76_RS21475 -3.2 -5.8 bifunctional chorismate mutase/prephenate dehydrogenase compare
BWI76_RS23240 -3.2 -4.8 exonuclease V subunit gamma compare
BWI76_RS02995 -3.2 -8.5 aspartate carbamoyltransferase compare
BWI76_RS21265 -3.1 -13.0 phosphoribosylformylglycinamidine synthase compare
BWI76_RS09660 -3.0 -2.1 DNA translocase FtsK compare
BWI76_RS22805 -3.0 -8.2 GTP diphosphokinase compare
BWI76_RS10990 -2.9 -3.4 dihydroorotase compare
BWI76_RS01610 -2.9 -9.6 phosphoribosylamine--glycine ligase compare
BWI76_RS00385 -2.9 -7.8 nitrogen assimilation regulatory protein compare
BWI76_RS20650 -2.9 -3.4 phosphoenolpyruvate--protein phosphotransferase compare
BWI76_RS20355 -2.9 -2.9 colicin V production protein compare
BWI76_RS25320 -2.8 -6.7 glutamate synthase compare
BWI76_RS23365 -2.8 -5.6 LysR family transcriptional regulator compare
BWI76_RS22690 -2.8 -4.5 adenylyl-sulfate kinase compare
BWI76_RS22755 -2.8 -7.4 phosphoadenosine phosphosulfate reductase compare
BWI76_RS08180 -2.7 -9.4 asparagine synthase B compare
BWI76_RS23360 -2.7 -3.3 diaminopimelate decarboxylase compare
BWI76_RS20350 -2.6 -5.3 amidophosphoribosyltransferase compare
BWI76_RS05835 -2.5 -2.7 gamma-glutamyl-phosphate reductase compare
BWI76_RS05015 -2.5 -2.9 transcriptional regulator compare
BWI76_RS04510 -2.4 -2.7 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) compare
BWI76_RS25335 -2.4 -5.2 stringent starvation protein A compare
BWI76_RS12470 -2.4 -2.7 thiosulfate sulfurtransferase PspE compare
BWI76_RS06595 -2.4 -2.7 hypothetical protein compare
BWI76_RS17250 -2.3 -5.2 bifunctional acetaldehyde-CoA/alcohol dehydrogenase compare
BWI76_RS07065 -2.3 -7.4 5-(carboxyamino)imidazole ribonucleotide synthase compare
BWI76_RS01800 -2.3 -4.0 glucose-6-phosphate isomerase compare
BWI76_RS18925 -2.2 -6.9 histidinol dehydrogenase compare
BWI76_RS18940 -2.2 -3.6 imidazole glycerol phosphate synthase subunit HisH compare
BWI76_RS00975 -2.1 -8.2 dihydroxy-acid dehydratase compare
BWI76_RS27390 -2.1 -3.3 ribonuclease PH compare
BWI76_RS06800 -2.1 -1.6 DUF2496 domain-containing protein compare
BWI76_RS00990 -2.1 -9.9 ketol-acid reductoisomerase compare
BWI76_RS25115 -2.1 -7.7 argininosuccinate synthase compare
BWI76_RS04515 -2.0 -2.0 Co2+/Mg2+ efflux protein ApaG compare
BWI76_RS25315 -2.0 -8.9 glutamate synthase large subunit compare
BWI76_RS00835 -2.0 -9.6 phosphoenolpyruvate carboxylase compare
BWI76_RS22760 -1.9 -6.7 sulfite reductase subunit beta compare
BWI76_RS04255 -1.9 -7.0 threonine synthase compare
BWI76_RS18820 -1.9 -4.1 nitrogenase molybdenum-iron protein subunit beta compare
BWI76_RS21140 -1.9 -3.4 molecular chaperone HscA compare
BWI76_RS08385 -1.9 -2.0 citrate (Si)-synthase compare
BWI76_RS22765 -1.8 -6.5 sulfite reductase subunit alpha compare
BWI76_RS24900 -1.8 -1.7 DeoR family transcriptional regulator compare
BWI76_RS01350 -1.8 -1.4 NAD(P)H-flavin reductase compare
BWI76_RS26570 -1.8 -2.9 anion permease compare
BWI76_RS23220 -1.7 -5.1 amino-acid N-acetyltransferase compare
BWI76_RS26075 -1.7 -3.3 DNA adenine methylase compare
BWI76_RS00855 -1.7 -5.3 argininosuccinate lyase compare
BWI76_RS14770 -1.7 -2.0 PTS IIA 2 domain protein compare
BWI76_RS18950 -1.7 -3.2 imidazole glycerol phosphate synthase cyclase subunit compare
BWI76_RS00850 -1.7 -6.3 acetylglutamate kinase compare
BWI76_RS05840 -1.6 -4.9 glutamate 5-kinase compare
BWI76_RS18920 -1.6 -4.2 ATP phosphoribosyltransferase compare
BWI76_RS18935 -1.6 -4.0 bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase compare
BWI76_RS15835 -1.6 -1.4 hypothetical protein compare
BWI76_RS23480 -1.5 -7.5 EAL domain-containing protein compare
BWI76_RS23760 -1.5 -2.0 tRNA-Gly compare
BWI76_RS25065 -1.5 -3.4 polyribonucleotide nucleotidyltransferase compare
BWI76_RS01200 -1.5 -1.6 diaminopimelate epimerase compare
BWI76_RS18870 -1.5 -1.4 protein NifZ compare
BWI76_RS18930 -1.4 -4.5 histidinol-phosphate transaminase compare
BWI76_RS06530 -1.4 -5.8 ATP-dependent Clp protease ATP-binding subunit ClpX compare
BWI76_RS07475 -1.4 -1.2 DNA-binding transcriptional regulator RamA compare
BWI76_RS04245 -1.4 -8.3 bifunctional aspartate kinase/homoserine dehydrogenase I compare
BWI76_RS03010 -1.4 -5.8 ornithine carbamoyltransferase compare
BWI76_RS02530 -1.4 -2.1 tRNA dimethylallyltransferase compare
BWI76_RS18835 -1.3 -6.4 nitrogenase iron-molybdenum cofactor biosynthesis protein NifE compare
BWI76_RS11840 -1.3 -3.8 tryptophan synthase subunit alpha compare
BWI76_RS04530 -1.3 -1.7 peptidylprolyl isomerase SurA compare
BWI76_RS16235 -1.3 -5.2 membrane protein compare
BWI76_RS18850 -1.3 -5.8 iron-sulfur cluster assembly scaffold protein NifU compare
BWI76_RS18840 -1.3 -5.8 nitrogenase iron-molybdenum cofactor biosynthesis protein NifN compare
BWI76_RS00440 -1.2 -1.5 CopG family transcriptional regulator compare
BWI76_RS15825 -1.2 -1.2 hypothetical protein compare
BWI76_RS00845 -1.2 -5.5 N-acetyl-gamma-glutamyl-phosphate reductase compare
BWI76_RS05450 -1.2 -1.6 ribonuclease HI compare
BWI76_RS04250 -1.2 -4.8 homoserine kinase compare
BWI76_RS13820 -1.2 -2.1 hypothetical protein compare
BWI76_RS19685 -1.2 -5.2 lysine transporter compare
BWI76_RS21580 -1.2 -1.3 SsrA-binding protein compare
BWI76_RS19840 -1.2 -1.2 hypothetical protein compare
BWI76_RS06765 -1.2 -1.7 transcriptional regulator compare
BWI76_RS27430 -1.1 -1.2 (p)ppGpp synthetase compare
BWI76_RS09530 -1.1 -1.2 hypothetical protein compare
BWI76_RS24025 -1.1 -5.4 agmatinase compare
BWI76_RS18860 -1.1 -4.0 homocitrate synthase compare
BWI76_RS16485 -1.1 -1.8 ribonuclease T compare
BWI76_RS18240 -1.1 -1.9 L-arabinose ABC transporter permease AraH compare
BWI76_RS20440 -1.1 -1.5 50S ribosomal protein L3 N(5)-glutamine methyltransferase compare
BWI76_RS18815 -1.1 -1.6 nitrogenase molybdenum-iron protein alpha chain compare
BWI76_RS04305 -1.1 -1.1 molecular chaperone DnaJ compare
BWI76_RS01185 -1.0 -1.8 adenylate cyclase compare
BWI76_RS00980 -1.0 -5.3 PLP-dependent threonine dehydratase compare
BWI76_RS15115 -1.0 -4.5 MFS transporter compare
BWI76_RS16660 -1.0 -2.3 SfnB family sulfur acquisition oxidoreductase compare
BWI76_RS02990 -1.0 -2.0 aspartate carbamoyltransferase regulatory subunit compare
BWI76_RS18895 -1.0 -4.0 nitrogenase cofactor biosynthesis protein NifB compare
BWI76_RS25505 -1.0 -5.3 RNase E specificity factor CsrD compare
BWI76_RS15290 -1.0 -1.3 transcriptional regulator compare
BWI76_RS09735 -1.0 -4.5 formate acetyltransferase compare
BWI76_RS00785 -1.0 -3.5 cystathionine gamma-synthase compare
BWI76_RS08655 -1.0 -2.5 molybdenum ABC transporter ATP-binding protein compare
BWI76_RS11860 -1.0 -3.1 anthranilate synthase component I compare
BWI76_RS23265 -1.0 -2.0 hypothetical protein compare
BWI76_RS18805 -1.0 -5.1 pyruvate:ferredoxin (flavodoxin) oxidoreductase compare
BWI76_RS12985 -0.9 -1.7 transcriptional regulator compare
BWI76_RS06525 -0.9 -2.6 ATP-dependent Clp protease proteolytic subunit compare
BWI76_RS18890 -0.9 -5.0 nif-specific transcriptional activator NifA compare
BWI76_RS13595 -0.9 -3.8 transcriptional regulator compare
BWI76_RS18885 -0.9 -1.5 nitrogen fixation regulatory protein compare
BWI76_RS26055 -0.9 -4.4 siroheme synthase compare
BWI76_RS20785 -0.9 -1.1 ethanolamine utilization protein EutJ compare
BWI76_RS25060 -0.9 -2.7 lipoprotein NlpI compare
BWI76_RS18875 -0.9 -4.4 nitrogen fixation protein NifM compare
BWI76_RS15150 -0.9 -1.3 outer membrane efflux protein compare
BWI76_RS09315 -0.9 -1.2 hypothetical protein compare
BWI76_RS20970 -0.9 -1.3 phosphoribosylglycinamide formyltransferase compare
BWI76_RS00345 -0.9 -1.1 protein disulfide oxidoreductase DsbA compare
BWI76_RS11130 -0.9 -4.3 PTS glucose transporter subunit IIBC compare
BWI76_RS08535 -0.9 -1.6 translocation protein TolB compare
BWI76_RS22640 -0.9 -1.7 hypothetical protein compare
BWI76_RS23875 -0.9 -2.4 glycine cleavage system protein H compare
BWI76_RS01630 -0.9 -1.0 16S ribosomal RNA compare
BWI76_RS25645 -0.9 -3.2 shikimate dehydrogenase compare
BWI76_RS08040 -0.9 -2.0 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH compare
BWI76_RS04240 -0.8 -1.4 thr operon leader peptide compare
BWI76_RS06535 -0.8 -1.9 endopeptidase La compare
BWI76_RS11850 -0.8 -4.6 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase compare
BWI76_RS27915 -0.8 -1.0 YceK/YidQ family lipoprotein compare
BWI76_RS15660 -0.8 -0.8 hypothetical protein compare
BWI76_RS04675 -0.8 -3.7 3-isopropylmalate dehydrogenase compare
BWI76_RS20995 -0.8 -2.8 RNA degradosome polyphosphate kinase compare
BWI76_RS11440 -0.8 -1.0 hypothetical protein compare
BWI76_RS21465 -0.8 -1.7 bifunctional chorismate mutase/prephenate dehydratase compare
BWI76_RS06770 -0.8 -4.5 Hha toxicity attenuator compare
BWI76_RS07465 -0.8 -1.8 TetR family transcriptional regulator compare
BWI76_RS01115 -0.8 -1.9 dTDP-4-amino-4,6-dideoxygalactose transaminase compare
BWI76_RS11285 -0.8 -1.1 transcriptional regulator compare
BWI76_RS14000 -0.8 -2.3 glutamine amidotransferase compare
BWI76_RS11855 -0.8 -2.4 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase compare
BWI76_RS02855 -0.8 -1.4 cytochrome B562 compare
BWI76_RS04670 -0.8 -4.1 3-isopropylmalate dehydratase large subunit compare
BWI76_RS01655 -0.8 -3.7 homoserine O-succinyltransferase compare
BWI76_RS02545 -0.8 -3.8 protease modulator HflK compare
BWI76_RS24075 -0.8 -2.6 glutathione synthase compare
BWI76_RS09655 -0.7 -2.5 leucine-responsive regulatory protein compare
BWI76_RS18710 -0.7 -5.3 GGDEF-domain containing protein compare
BWI76_RS23485 -0.7 -4.4 hypothetical protein compare
BWI76_RS25915 -0.7 -2.2 protein SlyX compare
BWI76_RS14300 -0.7 -2.6 hypothetical protein compare
BWI76_RS01795 -0.7 -1.4 hypothetical protein compare
BWI76_RS21480 -0.7 -3.1 phospho-2-dehydro-3-deoxyheptonate aldolase compare
BWI76_RS16805 -0.7 -1.4 basic amino acid ABC transporter substrate-binding protein compare
BWI76_RS00180 -0.7 -1.5 F0F1 ATP synthase subunit epsilon compare
BWI76_RS10245 -0.7 -1.8 aspartate aminotransferase compare
BWI76_RS18415 -0.7 -1.6 very short patch repair endonuclease compare
BWI76_RS09730 -0.7 -0.9 pyruvate formate lyase 1-activating protein compare
BWI76_RS10060 -0.7 -1.0 acylphosphatase compare
BWI76_RS09740 -0.7 -4.3 formate transporter FocA compare
BWI76_RS04665 -0.7 -5.4 3-isopropylmalate dehydratase small subunit compare
BWI76_RS18900 -0.7 -3.2 protein NifQ compare
BWI76_RS09470 -0.7 -1.0 putrescine ABC transporter permease compare
BWI76_RS15830 -0.7 -2.4 hypothetical protein compare
BWI76_RS01070 -0.7 -2.7 thiol reductase thioredoxin compare
BWI76_RS17980 -0.7 -2.2 RNA chaperone ProQ compare
BWI76_RS24285 -0.7 -3.8 cystathionine beta-lyase compare
BWI76_RS24585 -0.7 -1.8 glycerol dehydrogenase compare
BWI76_RS15685 -0.7 -1.5 hypothetical protein compare
BWI76_RS26065 -0.7 -1.8 phosphoglycolate phosphatase compare
BWI76_RS06605 -0.7 -2.8 ammonium transporter compare
BWI76_RS01595 -0.7 -1.5 zinc resistance protein compare
BWI76_RS18715 -0.7 -3.1 hypothetical protein compare
BWI76_RS10485 -0.7 -1.7 (hypo)xanthine hydroxylase reductase compare
BWI76_RS21350 -0.7 -1.5 anti-RNA polymerase sigma factor SigE compare
BWI76_RS22475 -0.7 -1.1 heme ABC transporter ATP-binding protein compare
BWI76_RS01380 -0.7 -1.6 YigZ family protein compare
BWI76_RS21090 -0.7 -1.1 cytoskeletal protein RodZ compare
BWI76_RS18590 -0.7 -1.6 DNA-binding response regulator compare


Specific Phenotypes

For 4 genes in this experiment

For nitrogen source sand in Klebsiella michiganensis M5al

For nitrogen source sand across organisms