Experiment set9IT045 for Methanococcus maripaludis S2

Compare to:

H2 McCas with 10 mM polysulfide

200 most detrimental genes:

  gene name fitness t score description  
MMP_RS02605 +1.7 2.4 MotA/TolQ/ExbB proton channel family protein compare
MMP_RS03340 +1.1 1.3 ABC transporter ATP-binding protein compare
MMP_RS08310 +1.0 2.8 TMEM165/GDT1 family protein compare
MMP_RS00675 +0.9 1.1 nitroreductase family protein compare
MMP_RS03215 +0.9 5.2 MBL fold metallo-hydrolase compare
MMP_RS07815 +0.8 1.4 DUF2120 domain-containing protein compare
MMP_RS07345 +0.8 3.3 glycine synthesis protein GlyXL (from data) compare
MMP_RS03450 +0.8 2.4 glycine synthesis protein GlyXS (from data) compare
MMP_RS08265 +0.8 4.2 rubrerythrin compare
MMP_RS08555 +0.7 2.2 hypothetical protein compare
MMP_RS06710 +0.7 3.4 selenium-binding protein compare
MMP_RS07900 +0.7 2.0 YeeE/YedE family protein compare
MMP_RS08235 +0.7 3.8 hypothetical protein compare
MMP_RS07765 +0.7 4.1 sodium:alanine symporter family protein compare
MMP_RS02720 +0.6 1.7 molybdate ABC transporter substrate-binding protein compare
MMP_RS01570 +0.6 1.2 hypothetical protein compare
MMP_RS07840 +0.6 1.4 ribonuclease III compare
MMP_RS02170 +0.6 3.1 CBS domain-containing protein compare
MMP_RS07770 +0.6 2.3 alanine racemase compare
MMP_RS05975 +0.6 1.1 hypothetical protein compare
MMP_RS02470 +0.6 0.8 helix-turn-helix transcriptional regulator compare
MMP_RS01630 +0.6 3.3 N-glycosylase/DNA lyase compare
MMP_RS06325 +0.6 1.1 hypothetical protein compare
MMP_RS02045 +0.6 1.1 tRNA-Met compare
MMP_RS08770 +0.6 3.0 hypothetical protein compare
MMP_RS03065 +0.6 1.7 AzlC family ABC transporter permease compare
MMP_RS08700 +0.6 3.5 hypothetical protein compare
MMP_RS08275 +0.5 3.0 hypothetical protein compare
MMP_RS04790 +0.5 3.6 4-hydroxy-tetrahydrodipicolinate reductase compare
MMP_RS03910 +0.5 1.2 hypothetical protein compare
MMP_RS06520 +0.5 1.8 DUF1786 domain-containing protein compare
MMP_RS06005 +0.5 1.5 heavy-metal-associated domain-containing protein compare
MMP_RS08260 +0.5 2.7 DUF99 family protein compare
MMP_RS07775 +0.5 2.7 alanine dehydrogenase compare
MMP_RS06910 +0.5 3.0 RlmF-related methyltransferase compare
MMP_RS08430 +0.5 1.4 HAD family hydrolase compare
MMP_RS08665 +0.5 3.5 hypothetical protein compare
MMP_RS05850 +0.5 1.0 Ldh family oxidoreductase compare
MMP_RS01055 +0.5 2.0 hypothetical protein compare
MMP_RS08085 +0.5 2.6 hypothetical protein compare
MMP_RS06965 +0.5 2.1 TIGR04014 family B12-binding domain/radical SAM domain-containing protein compare
MMP_RS01635 +0.4 1.9 thiamine pyrophosphate-dependent enzyme compare
MMP_RS08400 +0.4 1.3 MJ0307 family thioredoxin compare
MMP_RS08470 +0.4 2.4 ATP-binding cassette domain-containing protein compare
MMP_RS06015 +0.4 2.8 flavodoxin family protein compare
MMP_RS08640 +0.4 2.5 TIM barrel protein compare
MMP_RS02320 +0.4 2.5 glutamate-cysteine ligase family protein compare
MMP_RS00290 +0.4 2.4 hypothetical protein compare
MMP_RS00400 +0.4 1.5 tributyrin esterase compare
MMP_RS00185 +0.4 3.1 potassium channel protein compare
MMP_RS05365 +0.4 1.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH compare
MMP_RS08370 +0.4 0.3 cation:proton antiporter subunit C compare
MMP_RS07905 +0.4 1.7 DUF3343 domain-containing protein compare
MMP_RS08280 +0.4 1.5 proteasome assembly chaperone family protein compare
MMP_RS07715 +0.4 2.7 YfcE family phosphodiesterase compare
MMP_RS04035 +0.4 1.3 hypothetical protein compare
MMP_RS00345 +0.4 2.4 DUF2666 domain-containing protein compare
MMP_RS01250 +0.4 1.8 tRNA (guanine(26)-N(2))-dimethyltransferase compare
MMP_RS06860 +0.4 0.8 4Fe-4S binding protein compare
MMP_RS08130 +0.4 2.5 IGHMBP2 family helicase compare
MMP_RS08480 +0.4 2.6 molybdate ABC transporter substrate-binding protein compare
MMP_RS01865 +0.4 0.8 GPR1/FUN34/YaaH family transporter compare
MMP_RS01675 +0.4 0.8 hypothetical protein compare
MMP_RS06045 +0.4 2.5 DNA polymerase compare
MMP_RS00540 +0.4 2.0 PLP-dependent aminotransferase family protein compare
MMP_RS00565 +0.4 1.7 CBS domain-containing protein compare
MMP_RS09060 +0.4 2.8 hypothetical protein compare
MMP_RS07985 +0.4 2.7 nitroreductase family protein compare
MMP_RS07925 +0.4 1.2 haloacid dehalogenase compare
MMP_RS03800 +0.4 0.9 hypothetical protein compare
MMP_RS07915 +0.4 1.5 DUF4870 domain-containing protein compare
MMP_RS05965 +0.4 1.2 carboxymuconolactone decarboxylase family protein compare
MMP_RS02300 +0.4 1.3 NAD(P)H-dependent oxidoreductase compare
MMP_RS00435 +0.4 2.6 CPBP family intramembrane metalloprotease compare
MMP_RS01260 +0.4 1.0 HDIG domain-containing protein compare
MMP_RS04190 +0.4 2.9 hypothetical protein compare
MMP_RS00655 +0.4 1.0 hypothetical protein compare
MMP_RS01475 +0.4 1.8 phosphosulfolactate synthase compare
MMP_RS01090 +0.4 2.6 ABC transporter substrate-binding protein compare
MMP_RS09065 +0.4 2.6 hypothetical protein compare
MMP_RS02895 +0.4 2.7 DHH family phosphoesterase compare
MMP_RS02375 +0.4 2.3 hypothetical protein compare
MMP_RS01490 +0.4 2.1 tetratricopeptide repeat protein compare
MMP_RS08215 +0.4 0.7 DUF483 domain-containing protein compare
MMP_RS07115 +0.4 1.9 MBL fold metallo-hydrolase compare
MMP_RS07590 +0.4 2.2 hypothetical protein compare
MMP_RS07150 +0.4 1.7 MTH895/ArsE family thioredoxin-like protein compare
MMP_RS07835 +0.4 1.2 TldD/PmbA family protein compare
MMP_RS01320 +0.4 1.3 hypothetical protein compare
MMP_RS01855 +0.4 2.2 2-hydroxyacyl-CoA dehydratase family protein compare
MMP_RS08835 +0.4 1.8 H(2)-dependent methylenetetrahydromethanopterin dehydrogenase-related protein compare
MMP_RS04030 +0.4 2.0 hypothetical protein compare
MMP_RS06480 +0.4 1.5 ABC transporter substrate-binding protein compare
MMP_RS07095 +0.4 1.0 PspC domain-containing protein compare
MMP_RS00285 +0.4 1.6 TIGR04013 family B12-binding domain/radical SAM domain-containing protein compare
MMP_RS07960 +0.4 2.0 sugar phosphate isomerase/epimerase compare
MMP_RS00990 +0.4 0.9 hypothetical protein compare
MMP_RS08485 +0.4 1.8 tungstate ABC transporter substrate-binding protein WtpA compare
MMP_RS03305 +0.4 1.6 winged helix-turn-helix domain-containing protein compare
MMP_RS08670 +0.4 1.7 metallophosphoesterase compare
MMP_RS08285 +0.4 2.2 serine/threonine protein kinase compare
MMP_RS01785 +0.3 2.1 hypothetical protein compare
MMP_RS01485 +0.3 2.1 right-handed parallel beta-helix repeat-containing protein compare
MMP_RS04830 +0.3 2.4 chemotaxis protein CheC compare
MMP_RS07805 +0.3 1.4 ABC transporter permease compare
MMP_RS08750 +0.3 1.0 hypothetical protein compare
MMP_RS02590 +0.3 2.2 low molecular weight phosphatase family protein compare
MMP_RS07125 +0.3 1.3 coenzyme F420-reducing hydrogenase FrhD protein compare
MMP_RS02510 +0.3 2.0 site-specific integrase compare
MMP_RS09030 +0.3 1.3 hypothetical protein compare
MMP_RS06540 +0.3 1.0 3-methyl-2-oxobutanoate dehydrogenase subunit VorB compare
MMP_RS00385 +0.3 2.0 P-II family nitrogen regulator compare
MMP_RS08160 +0.3 1.3 EamA family transporter compare
MMP_RS06335 +0.3 1.3 HAD family hydrolase compare
MMP_RS07120 +0.3 2.3 coenzyme F420 hydrogenase subunit alpha compare
MMP_RS00545 +0.3 1.1 XRE family transcriptional regulator compare
MMP_RS08415 +0.3 0.8 radical SAM protein compare
MMP_RS01680 +0.3 2.4 phenylacetate--CoA ligase compare
MMP_RS06590 +0.3 0.7 GNAT family N-acetyltransferase compare
MMP_RS06905 +0.3 0.7 hypothetical protein compare
MMP_RS08325 +0.3 1.7 hypothetical protein compare
MMP_RS06140 +0.3 1.3 radical SAM protein compare
MMP_RS08390 +0.3 1.5 DUF5400 domain-containing protein compare
MMP_RS06150 +0.3 2.1 hypothetical protein compare
MMP_RS02295 +0.3 2.0 TatD family hydrolase compare
MMP_RS05980 +0.3 1.7 ferritin compare
MMP_RS06080 +0.3 2.1 radical SAM protein compare
MMP_RS02595 +0.3 0.5 putative zinc-binding protein compare
MMP_RS00625 +0.3 2.2 hypothetical protein compare
MMP_RS02200 +0.3 2.2 methyl-accepting chemotaxis protein compare
MMP_RS08080 +0.3 1.5 YchF/TatD family DNA exonuclease compare
MMP_RS00665 +0.3 1.3 hypothetical protein compare
MMP_RS01060 +0.3 2.2 calcium/sodium antiporter compare
MMP_RS08755 +0.3 2.1 sodium:solute symporter family protein compare
MMP_RS07530 +0.3 2.2 4Fe-4S binding protein compare
MMP_RS07100 +0.3 2.1 hypothetical protein compare
MMP_RS07130 +0.3 1.6 coenzyme F420 hydrogenase subunit gamma compare
MMP_RS07550 +0.3 2.1 L-serine ammonia-lyase iron-sulfur-dependent subunit alpha compare
MMP_RS06735 +0.3 1.5 class I SAM-dependent rRNA methyltransferase compare
MMP_RS07155 +0.3 1.8 MFS transporter compare
MMP_RS07650 +0.3 2.0 TldD/PmbA family protein compare
MMP_RS07680 +0.3 1.3 DUF366 family protein compare
MMP_RS05985 +0.3 0.7 hypothetical protein compare
MMP_RS01165 +0.3 1.0 DUF434 domain-containing protein compare
MMP_RS08380 +0.3 1.0 phosphatase PAP2 family protein compare
MMP_RS03535 +0.3 0.8 helix-turn-helix transcriptional regulator compare
MMP_RS04805 +0.3 2.1 chemotaxis response regulator protein-glutamate methylesterase compare
MMP_RS08475 +0.3 1.4 ABC transporter permease compare
MMP_RS02965 +0.3 0.7 carboxymuconolactone decarboxylase family protein compare
MMP_RS00800 +0.3 1.9 Coenzyme F420 hydrogenase/dehydrogenase beta subunit C-terminal domain compare
MMP_RS06250 +0.3 1.6 hypothetical protein compare
MMP_RS07890 +0.3 0.8 OB-fold nucleic acid binding domain-containing protein compare
MMP_RS02020 +0.3 1.2 gamma-glutamylcyclotransferase compare
MMP_RS03235 +0.3 1.1 tRNA pseudouridine(13) synthase TruD compare
MMP_RS03090 +0.3 1.5 cation:proton antiporter compare
MMP_RS07895 +0.3 0.9 cytochrome c compare
MMP_RS06875 +0.3 1.1 FAD-dependent oxidoreductase compare
MMP_RS06165 +0.3 1.5 ABC transporter permease compare
MMP_RS02680 +0.3 1.3 ABC transporter permease compare
MMP_RS06305 +0.3 1.2 transporter substrate-binding domain-containing protein compare
MMP_RS08245 +0.3 1.8 DUF4013 domain-containing protein compare
MMP_RS06145 +0.3 2.4 hypothetical protein compare
MMP_RS08490 +0.3 2.2 hypothetical protein compare
MMP_RS05715 +0.3 1.3 hypothetical protein compare
MMP_RS04985 +0.3 1.4 DUF2180 family protein compare
MMP_RS01135 +0.3 2.1 molybdate ABC transporter substrate-binding protein compare
MMP_RS02810 +0.3 1.5 hypothetical protein compare
MMP_RS04055 +0.3 0.5 hypothetical protein compare
MMP_RS00975 +0.3 1.7 HD domain-containing protein compare
MMP_RS04205 +0.3 1.5 carboxymuconolactone decarboxylase family protein compare
MMP_RS00085 +0.3 1.5 DNA cytosine methyltransferase compare
MMP_RS01190 +0.3 1.3 cadmium-translocating P-type ATPase compare
MMP_RS08395 +0.3 1.1 DsrE family protein compare
MMP_RS08290 +0.3 1.2 DNA-binding protein Alba compare
MMP_RS00295 +0.3 0.6 gamma carbonic anhydrase family protein compare
MMP_RS03320 +0.3 0.8 metal-dependent transcriptional regulator compare
MMP_RS06440 +0.3 1.2 CBS domain-containing protein compare
MMP_RS03750 +0.3 1.3 ACT domain-containing protein compare
MMP_RS01965 +0.3 0.9 DUF1616 domain-containing protein compare
MMP_RS06515 +0.2 0.6 UPF0489 family protein compare
MMP_RS03890 +0.2 1.1 DUF2540 domain-containing protein compare
MMP_RS00950 +0.2 1.4 site-2 protease family protein compare
MMP_RS06990 +0.2 0.9 CatB-related O-acetyltransferase compare
MMP_RS06570 +0.2 0.7 DUF190 domain-containing protein compare
MMP_RS01605 +0.2 1.4 hypothetical protein compare
MMP_RS03150 +0.2 1.5 phosphoglycerate mutase compare
MMP_RS00945 +0.2 0.4 PadR family transcriptional regulator compare
MMP_RS01065 +0.2 1.6 alpha/beta hydrolase compare
MMP_RS06490 +0.2 0.9 hypothetical protein compare
MMP_RS08760 +0.2 0.8 hypothetical protein compare
MMP_RS02110 +0.2 0.6 hypothetical protein compare
MMP_RS05490 +0.2 1.1 IMPACT family protein compare
MMP_RS04100 +0.2 0.9 hypothetical protein compare
MMP_RS04145 +0.2 0.5 hypothetical protein compare
MMP_RS08500 +0.2 0.7 pyridoxal 5'-phosphate synthase glutaminase subunit PdxT compare
MMP_RS04795 +0.2 1.4 tRNA (pseudouridine(54)-N(1))-methyltransferase TrmY compare
MMP_RS05780 +0.2 1.4 multidrug resistance efflux transporter family protein compare
MMP_RS05660 +0.2 1.2 phosphate ABC transporter substrate-binding protein compare
MMP_RS00770 +0.2 1.0 hypothetical protein compare
MMP_RS04610 +0.2 1.0 Dabb family protein compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis S2 in stress experiments

For stress potassium (poly)sulfide across organisms