Experiment set9IT044 for Methanococcus maripaludis S2

Compare to:

H2 McCas with 10 mM polysulfide

200 most important genes:

  gene name fitness t score description  
MMP_RS01020 -5.4 -1.4 3 4-dihydroxy-2-butanone-4-phosphate synthase compare
MMP_RS02900 -5.4 -1.0 imidazoleglycerol-phosphate dehydratase HisB compare
MMP_RS07005 -5.3 -1.0 4Fe-4S binding protein compare
MMP_RS04720 -5.1 -4.8 DedA family protein compare
MMP_RS03600 -5.0 -3.3 triose-phosphate isomerase compare
MMP_RS03035 -4.9 -6.1 4-hydroxy-tetrahydrodipicolinate synthase compare
MMP_RS02145 -4.8 -13.0 winged helix-turn-helix transcriptional regulator compare
MMP_RS03315 -4.4 -1.8 ferrous iron transport protein A compare
MMP_RS05920 -4.4 -1.1 50S ribosomal protein L37e compare
MMP_RS01880 -4.4 -11.6 DegT/DnrJ/EryC1/StrS family aminotransferase compare
MMP_RS06630 -4.4 -1.6 UPF0058 family protein compare
MMP_RS04890 -4.3 -1.5 adenylyltransferase/cytidyltransferase family protein compare
MMP_RS03475 -4.1 -1.0 hypothetical protein compare
MMP_RS03700 -4.1 -12.7 sodium:proton antiporter compare
MMP_RS06120 -4.1 -3.6 UPF0147 family protein compare
MMP_RS01385 -4.0 -1.0 imidazole glycerol phosphate synthase subunit HisH compare
MMP_RS01905 -3.9 -19.0 glycosyltransferase compare
MMP_RS07390 -3.9 -4.4 cell division protein FtsZ compare
MMP_RS08790 -3.8 -3.1 translation initiation factor IF-2 subunit alpha compare
MMP_RS03110 -3.8 -8.1 glycosyltransferase family 2 protein compare
MMP_RS06670 -3.7 -9.8 glucose-6-phosphate isomerase compare
MMP_RS04685 -3.7 -5.6 DUF126 domain-containing protein compare
MMP_RS07380 -3.7 -3.4 transcription elongation factor Spt5 compare
MMP_RS08650 -3.7 -5.3 glutamine--fructose-6-phosphate transaminase (isomerizing) compare
MMP_RS01885 -3.7 -11.4 Gfo/Idh/MocA family oxidoreductase compare
MMP_RS05250 -3.7 -3.1 NFYB/HAP3 family transcription factor subunit compare
MMP_RS08745 -3.7 -9.6 CDP-2 3-bis-(O-geranylgeranyl)-sn-glycerol synthase compare
MMP_RS01925 -3.6 -14.8 DUF1616 domain-containing protein compare
MMP_RS08635 -3.6 -3.2 UbiA family prenyltransferase compare
MMP_RS01875 -3.6 -19.5 N-acetyltransferase compare
MMP_RS07755 -3.6 -1.9 DUF555 domain-containing protein compare
MMP_RS07075 -3.5 -8.0 phosphomannomutase/phosphoglucomutase compare
MMP_RS01380 -3.5 -5.2 PHP domain-containing protein compare
MMP_RS05845 -3.5 -3.1 tRNA-intron lyase compare
MMP_RS08720 -3.5 -2.3 4Fe-4S binding protein compare
MMP_RS06895 -3.5 -2.3 selenocysteine-specific translation elongation factor compare
MMP_RS00300 -3.4 -1.2 6 7-dimethyl-8-ribityllumazine synthase compare
MMP_RS01175 -3.4 -5.8 triphosphoribosyl-dephospho-CoA synthase compare
MMP_RS02010 -3.4 -14.5 PHP domain-containing protein compare
MMP_RS06110 -3.4 -4.6 ATP-dependent protease LonB compare
MMP_RS09020 -3.4 -2.8 hypothetical protein compare
MMP_RS03015 -3.4 -13.2 GTP 3' 8-cyclase MoaA compare
MMP_RS08440 -3.3 -5.7 cell division protein SepF compare
MMP_RS01900 -3.3 -19.0 hypothetical protein compare
MMP_RS06350 -3.3 -9.9 HesA/MoeB/ThiF family protein compare
MMP_RS07635 -3.3 -11.8 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMP_RS01265 -3.2 -4.4 hypothetical protein compare
MMP_RS01225 -3.2 -7.1 DUF5379 domain-containing protein compare
MMP_RS08715 -3.2 -2.9 formylmethanofuran dehydrogenase subunit B compare
MMP_RS06400 -3.2 -1.9 4Fe-4S binding protein compare
MMP_RS08210 -3.1 -3.1 phosphatidylglycerophosphatase A compare
MMP_RS07605 -3.1 -6.1 diadenylate cyclase compare
MMP_RS00040 -3.1 -7.1 TIGR03576 family pyridoxal phosphate-dependent enzyme compare
MMP_RS00900 -3.1 -3.1 50S ribosomal protein L39e compare
MMP_RS05515 -3.1 -9.2 cyclic pyranopterin monophosphate synthase MoaC compare
MMP_RS00895 -3.0 -5.2 hypothetical protein compare
MMP_RS01725 -3.0 -7.2 class I SAM-dependent methyltransferase family protein compare
MMP_RS08460 -3.0 -3.9 proteasome-activating nucleotidase compare
MMP_RS02800 -3.0 -8.0 nucleotidyltransferase domain-containing protein compare
MMP_RS08435 -3.0 -2.7 Era-like GTP-binding protein compare
MMP_RS06355 -3.0 -2.6 molybdenum cofactor biosynthesis protein MoaE compare
MMP_RS04780 -3.0 -4.5 ribonuclease P compare
MMP_RS02240 -3.0 -3.8 methanogenesis marker 7 protein compare
MMP_RS03960 -2.9 -1.6 hypothetical protein compare
MMP_RS01895 -2.9 -19.3 flippase compare
MMP_RS00515 -2.9 -1.6 DUF655 domain-containing protein compare
MMP_RS00110 -2.9 -3.4 hypothetical protein compare
MMP_RS03640 -2.9 -6.4 archaeal proteasome endopeptidase complex subunit beta compare
MMP_RS08820 -2.9 -7.1 hypothetical protein compare
MMP_RS01005 -2.8 -1.8 riboflavin synthase compare
MMP_RS00305 -2.8 -2.5 phosphoribosyl-ATP diphosphatase compare
MMP_RS06625 -2.8 -3.1 DNA primase compare
MMP_RS01890 -2.8 -6.9 nucleotide sugar dehydrogenase compare
MMP_RS06270 -2.8 -7.5 TIGR00300 family protein compare
MMP_RS05550 -2.8 -1.1 cation:proton antiporter compare
MMP_RS04090 -2.8 -4.0 hypothetical protein compare
MMP_RS05640 -2.8 -7.6 UTP--glucose-1-phosphate uridylyltransferase GalU compare
MMP_RS07750 -2.7 -4.4 DUF357 domain-containing protein compare
MMP_RS02195 -2.7 -4.6 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase compare
MMP_RS06340 -2.7 -10.4 phosphoadenosine phosphosulfate reductase family protein compare
MMP_RS00810 -2.7 -10.4 topoisomerase DNA-binding C4 zinc finger domain-containing protein compare
MMP_RS04775 -2.7 -4.5 adenosylhomocysteinase compare
MMP_RS08300 -2.7 -1.8 metal-sulfur cluster assembly factor compare
MMP_RS06980 -2.7 -11.5 tRNA 2-thiocytidine biosynthesis TtcA family protein compare
MMP_RS00520 -2.7 -2.2 RNA polymerase Rpb4 family protein compare
MMP_RS06975 -2.6 -3.3 sulfide-dependent adenosine diphosphate thiazole synthase compare
MMP_RS03400 -2.6 -3.2 archease compare
MMP_RS03095 -2.6 -8.1 diphthine synthase compare
MMP_RS06475 -2.6 -8.0 FAD-dependent oxidoreductase compare
MMP_RS00735 -2.5 -5.2 5 10-methenyltetrahydromethanopterin hydrogenase compare
MMP_RS04710 -2.5 -2.5 hypothetical protein compare
MMP_RS06885 -2.5 -3.9 50S ribosome-binding GTPase compare
MMP_RS02875 -2.5 -11.7 chorismate pyruvate-lyase family protein compare
MMP_RS05425 -2.5 -6.8 monovalent cation/H+ antiporter complex subunit F compare
MMP_RS01955 -2.5 -4.6 hypothetical protein compare
MMP_RS03435 -2.4 -2.2 ketol-acid reductoisomerase compare
MMP_RS01500 -2.4 -3.7 CBS domain-containing protein compare
MMP_RS03025 -2.4 -6.1 molybdenum cofactor guanylyltransferase compare
MMP_RS01800 -2.4 -4.8 TIGR00303 family protein compare
MMP_RS05815 -2.4 -2.5 NOL1/NOP2/sun family putative RNA methylase compare
MMP_RS04585 -2.4 -11.1 AIR synthase related protein compare
MMP_RS07710 -2.4 -8.4 cell division protein FtsZ compare
MMP_RS07580 -2.3 -4.3 DUF356 domain-containing protein compare
MMP_RS01755 -2.3 -1.9 DUF2097 domain-containing protein compare
MMP_RS06900 -2.3 -3.6 coenzyme F420-reducing hydrogenase FrhD protein compare
MMP_RS06725 -2.3 -12.3 hypothetical protein compare
MMP_RS05555 -2.3 -1.9 DUF4040 domain-containing protein compare
MMP_RS06940 -2.3 -4.1 polyprenyl diphosphate synthase compare
MMP_RS07600 -2.3 -3.1 Ni-sirohydrochlorin a c-diamide synthase compare
MMP_RS02345 -2.3 -4.3 GTP-dependent dephospho-CoA kinase family protein compare
MMP_RS00315 -2.3 -7.3 Nif3-like dinuclear metal center hexameric protein compare
MMP_RS06230 -2.3 -2.4 helix-turn-helix domain-containing protein compare
MMP_RS01325 -2.3 -2.3 dihydroneopterin aldolase family protein compare
MMP_RS07200 -2.3 -7.3 [5-(aminomethyl)furan-3-yl]methyl phosphate kinase compare
MMP_RS01830 -2.2 -2.5 tRNA-Val compare
MMP_RS06295 -2.2 -5.7 methanogenesis marker 14 protein compare
MMP_RS00695 -2.2 -1.1 biotin--[acetyl-CoA-carboxylase] ligase compare
MMP_RS01910 -2.2 -10.0 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
MMP_RS01610 -2.2 -3.8 hypothetical protein compare
MMP_RS01915 -2.2 -14.5 DUF354 domain-containing protein compare
MMP_RS03580 -2.2 -3.9 signal recognition particle-docking protein FtsY compare
MMP_RS01240 -2.2 -2.6 7-cyano-7-deazaguanine synthase QueC compare
MMP_RS07540 -2.2 -3.9 CBS domain-containing protein compare
MMP_RS01365 -2.1 -2.6 archaeal proteasome endopeptidase complex subunit alpha compare
MMP_RS06395 -2.1 -4.3 ThiF family adenylyltransferase compare
MMP_RS05500 -2.1 -9.8 2-isopropylmalate synthase compare
MMP_RS06370 -2.1 -5.1 biotin synthase BioB compare
MMP_RS01700 -2.1 -1.2 dihydroxy-acid dehydratase compare
MMP_RS01220 -2.1 -7.7 hypothetical protein compare
MMP_RS06925 -2.1 -3.3 ribonuclease VapC4 compare
MMP_RS04500 -2.1 -14.2 adenosylmethionine--8-amino-7-oxononanoate transaminase compare
MMP_RS05930 -2.1 -3.2 3-isopropylmalate dehydratase large subunit compare
MMP_RS07625 -2.1 -5.0 cobalt ECF transporter T component CbiQ compare
MMP_RS06285 -2.1 -2.4 precorrin-6Y C5 15-methyltransferase (decarboxylating) subunit CbiT compare
MMP_RS05525 -2.1 -7.1 calcium/sodium antiporter compare
MMP_RS07875 -2.0 -8.8 hypothetical protein compare
MMP_RS02135 -2.0 -4.9 DUF5612 domain-containing protein compare
MMP_RS03445 -2.0 -1.3 methanogenesis marker 17 protein compare
MMP_RS04955 -2.0 -6.5 DNA topoisomerase I compare
MMP_RS01840 -2.0 -6.8 TIGR00289 family protein compare
MMP_RS07730 -2.0 -2.5 pyruvate synthase subunit beta compare
MMP_RS07695 -2.0 -7.9 DUF3236 domain-containing protein compare
MMP_RS03140 -2.0 -12.0 hypothetical protein compare
MMP_RS06020 -2.0 -5.8 archaeoflavoprotein AfpA compare
MMP_RS05345 -2.0 -8.6 hypothetical protein compare
MMP_RS01795 -2.0 -2.0 methanogenesis marker 6 protein compare
MMP_RS07420 -1.9 -5.4 metalloregulator ArsR/SmtB family transcription factor compare
MMP_RS06105 -1.9 -7.5 hydrogenase maturation peptidase HycI compare
MMP_RS01975 -1.9 -13.7 hypothetical protein compare
MMP_RS04850 -1.9 -12.7 UPF0254 family protein compare
MMP_RS07845 -1.9 -2.6 LL-diaminopimelate aminotransferase compare
MMP_RS06310 -1.9 -4.8 NAD(P)/FAD-dependent oxidoreductase compare
MMP_RS03145 -1.9 -8.6 fibrillarin-like rRNA/tRNA 2'-O-methyltransferase compare
MMP_RS08155 -1.9 -8.5 hypothetical protein compare
MMP_RS01545 -1.8 -1.6 CBS domain-containing protein compare
MMP_RS02280 -1.8 -0.9 DUF211 domain-containing protein compare
MMP_RS00320 -1.8 -2.4 class I SAM-dependent methyltransferase compare
MMP_RS06130 -1.8 -5.6 peptidylprolyl isomerase compare
MMP_RS07955 -1.8 -5.0 FumA C-terminus/TtdB family hydratase beta subunit compare
MMP_RS07525 -1.8 -6.2 4Fe-4S binding protein compare
MMP_RS00050 -1.8 -7.7 AarF/UbiB family protein compare
MMP_RS07385 -1.8 -1.5 protein translocase SEC61 complex subunit gamma compare
MMP_RS01575 -1.8 -4.6 aldolase compare
MMP_RS01940 -1.7 -5.1 MoxR family ATPase compare
MMP_RS00720 -1.7 -8.5 metal-dependent hydrolase compare
MMP_RS01720 -1.7 -1.3 replication factor C large subunit compare
MMP_RS08095 -1.7 -6.5 dethiobiotin synthase compare
MMP_RS03300 -1.7 -0.9 TOBE domain-containing protein compare
MMP_RS07700 -1.7 -8.2 DUF1188 domain-containing protein compare
MMP_RS00685 -1.7 -2.7 2-phospho-L-lactate guanylyltransferase compare
MMP_RS00985 -1.7 -5.5 CDC48 family AAA ATPase compare
MMP_RS03155 -1.6 -5.5 precorrin-6A reductase compare
MMP_RS06215 -1.6 -2.8 30S ribosomal protein S6e compare
MMP_RS05925 -1.6 -5.0 small nuclear ribonucleoprotein compare
MMP_RS00730 -1.6 -5.8 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdB compare
MMP_RS06730 -1.6 -1.2 phosphopantothenate/pantothenate synthetase compare
MMP_RS07820 -1.6 -6.1 UPF0104 family protein compare
MMP_RS08330 -1.6 -5.0 NADH-quinone oxidoreductase subunit H compare
MMP_RS08195 -1.6 -8.0 hypothetical protein compare
MMP_RS01960 -1.5 -0.8 hypothetical protein compare
MMP_RS01335 -1.5 -2.3 prefoldin subunit beta compare
MMP_RS08105 -1.5 -6.2 6-carboxyhexanoate--CoA ligase compare
MMP_RS08595 -1.5 -1.5 flagellar protein C compare
MMP_RS02245 -1.5 -2.7 hypothetical protein compare
MMP_RS07545 -1.5 -1.1 HTH domain-containing protein compare
MMP_RS01920 -1.5 -9.8 glycosyltransferase family 2 protein compare
MMP_RS01970 -1.5 -8.7 TIGR04279 domain-containing protein compare
MMP_RS04605 -1.5 -4.3 cobalt ECF transporter T component CbiQ compare
MMP_RS02355 -1.4 -2.2 30S ribosomal protein S27ae compare
MMP_RS05540 -1.4 -2.6 hypothetical protein compare
MMP_RS07630 -1.4 -1.5 ATP-binding cassette domain-containing protein compare
MMP_RS07735 -1.4 -1.0 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha compare
MMP_RS01665 -1.4 -3.2 DUF2111 domain-containing protein compare
MMP_RS07575 -1.4 -2.3 RNA ligase partner protein compare
MMP_RS01045 -1.4 -6.9 diphthamide biosynthesis enzyme Dph2 compare
MMP_RS08660 -1.4 -7.1 DHH family phosphoesterase compare
MMP_RS07615 -1.4 -6.3 energy-coupling factor ABC transporter permease compare
MMP_RS07645 -1.4 -5.1 aldehyde dehydrogenase family protein compare
MMP_RS04875 -1.4 -4.5 energy-converting hydrogenase B subunit P compare
MMP_RS00725 -1.3 -3.2 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdC compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis S2 in stress experiments

For stress potassium (poly)sulfide across organisms