Experiment set9IT044 for Methanococcus maripaludis S2

Compare to:

H2 McCas with 10 mM polysulfide

200 most detrimental genes:

  gene name fitness t score description  
MMP_RS00675 +1.1 1.4 nitroreductase family protein compare
MMP_RS08615 +1.1 1.7 flagellar protein G compare
MMP_RS01570 +0.9 1.8 hypothetical protein compare
MMP_RS06325 +0.8 1.6 hypothetical protein compare
MMP_RS02720 +0.7 2.4 molybdate ABC transporter substrate-binding protein compare
MMP_RS07765 +0.7 3.9 sodium:alanine symporter family protein compare
MMP_RS02045 +0.7 1.4 tRNA-Met compare
MMP_RS07840 +0.7 1.6 ribonuclease III compare
MMP_RS04015 +0.7 2.4 hypothetical protein compare
MMP_RS08090 +0.7 2.7 hypothetical protein compare
MMP_RS03215 +0.6 4.3 MBL fold metallo-hydrolase compare
MMP_RS00290 +0.6 3.8 hypothetical protein compare
MMP_RS07850 +0.6 1.8 prephenate dehydratase compare
MMP_RS08580 +0.6 2.2 flagellin compare
MMP_RS00655 +0.6 2.0 hypothetical protein compare
MMP_RS07560 +0.6 2.0 prefoldin subunit alpha compare
MMP_RS06910 +0.6 2.7 RlmF-related methyltransferase compare
MMP_RS07155 +0.6 3.3 MFS transporter compare
MMP_RS01435 +0.6 2.8 DMT family transporter compare
MMP_RS06335 +0.6 1.7 HAD family hydrolase compare
MMP_RS04205 +0.6 2.8 carboxymuconolactone decarboxylase family protein compare
MMP_RS03490 +0.6 1.2 DUF2115 domain-containing protein compare
MMP_RS07345 +0.5 2.3 glycine synthesis protein GlyXL (from data) compare
MMP_RS05965 +0.5 1.5 carboxymuconolactone decarboxylase family protein compare
MMP_RS04835 +0.5 1.8 chemotaxis protein CheC compare
MMP_RS08275 +0.5 2.7 hypothetical protein compare
MMP_RS00185 +0.5 3.9 potassium channel protein compare
MMP_RS00975 +0.5 3.0 HD domain-containing protein compare
MMP_RS08640 +0.5 3.3 TIM barrel protein compare
MMP_RS03305 +0.5 2.9 winged helix-turn-helix domain-containing protein compare
MMP_RS02745 +0.5 1.6 hypothetical protein compare
MMP_RS08670 +0.5 2.8 metallophosphoesterase compare
MMP_RS08310 +0.5 1.2 TMEM165/GDT1 family protein compare
MMP_RS07985 +0.5 3.5 nitroreductase family protein compare
MMP_RS07960 +0.5 2.5 sugar phosphate isomerase/epimerase compare
MMP_RS08370 +0.5 0.4 cation:proton antiporter subunit C compare
MMP_RS08245 +0.5 2.9 DUF4013 domain-containing protein compare
MMP_RS08850 +0.5 4.0 hypothetical protein compare
MMP_RS07900 +0.5 1.0 YeeE/YedE family protein compare
MMP_RS06500 +0.5 3.0 ATP-binding protein compare
MMP_RS03465 +0.5 0.7 adenine phosphoribosyltransferase compare
MMP_RS01630 +0.5 3.3 N-glycosylase/DNA lyase compare
MMP_RS06710 +0.5 2.2 selenium-binding protein compare
MMP_RS08280 +0.5 1.7 proteasome assembly chaperone family protein compare
MMP_RS07925 +0.5 1.5 haloacid dehalogenase compare
MMP_RS08260 +0.5 2.5 DUF99 family protein compare
MMP_RS06520 +0.5 2.8 DUF1786 domain-containing protein compare
MMP_RS03890 +0.5 2.5 DUF2540 domain-containing protein compare
MMP_RS05365 +0.5 0.8 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH compare
MMP_RS01320 +0.5 1.9 hypothetical protein compare
MMP_RS08325 +0.4 2.7 hypothetical protein compare
MMP_RS00345 +0.4 2.2 DUF2666 domain-containing protein compare
MMP_RS07910 +0.4 2.7 NAD(P)H-hydrate dehydratase compare
MMP_RS02675 +0.4 1.5 hypothetical protein compare
MMP_RS08390 +0.4 1.2 DUF5400 domain-containing protein compare
MMP_RS03520 +0.4 0.6 YwbE family protein compare
MMP_RS08845 +0.4 2.7 archaellum operon transcriptional activator EarA family protein compare
MMP_RS03910 +0.4 1.3 hypothetical protein compare
MMP_RS05720 +0.4 1.2 signal recognition particle subunit SRP19/SEC65 family protein compare
MMP_RS06305 +0.4 2.1 transporter substrate-binding domain-containing protein compare
MMP_RS07890 +0.4 0.9 OB-fold nucleic acid binding domain-containing protein compare
MMP_RS01965 +0.4 1.3 DUF1616 domain-containing protein compare
MMP_RS01785 +0.4 2.7 hypothetical protein compare
MMP_RS08835 +0.4 2.4 H(2)-dependent methylenetetrahydromethanopterin dehydrogenase-related protein compare
MMP_RS08700 +0.4 2.1 hypothetical protein compare
MMP_RS08130 +0.4 2.7 IGHMBP2 family helicase compare
MMP_RS08160 +0.4 1.8 EamA family transporter compare
MMP_RS07085 +0.4 2.3 ribonuclease HII compare
MMP_RS04100 +0.4 1.1 hypothetical protein compare
MMP_RS00400 +0.4 1.3 tributyrin esterase compare
MMP_RS06150 +0.4 3.0 hypothetical protein compare
MMP_RS00155 +0.4 2.3 heavy metal-binding domain-containing protein compare
MMP_RS08455 +0.4 1.6 multiprotein bridging factor aMBF1 compare
MMP_RS07895 +0.4 1.1 cytochrome c compare
MMP_RS08315 +0.4 1.4 S-methyl-5-thioribose-1-phosphate isomerase compare
MMP_RS00990 +0.4 0.8 hypothetical protein compare
MMP_RS07550 +0.4 2.3 L-serine ammonia-lyase iron-sulfur-dependent subunit alpha compare
MMP_RS01055 +0.4 1.8 hypothetical protein compare
MMP_RS06320 +0.4 1.5 hypothetical protein compare
MMP_RS06720 +0.4 2.0 response regulator transcription factor compare
MMP_RS07915 +0.4 1.5 DUF4870 domain-containing protein compare
MMP_RS08265 +0.4 1.7 rubrerythrin compare
MMP_RS07100 +0.4 2.2 hypothetical protein compare
MMP_RS06745 +0.4 1.4 DUF2119 domain-containing protein compare
MMP_RS08480 +0.3 2.0 molybdate ABC transporter substrate-binding protein compare
MMP_RS01675 +0.3 0.7 hypothetical protein compare
MMP_RS08085 +0.3 2.2 hypothetical protein compare
MMP_RS08610 +0.3 2.1 flagellar protein F compare
MMP_RS08250 +0.3 2.0 pyruvate kinase compare
MMP_RS02385 +0.3 2.0 ATP-binding protein compare
MMP_RS06190 +0.3 2.3 tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO compare
MMP_RS08555 +0.3 0.8 hypothetical protein compare
MMP_RS00705 +0.3 0.6 hypothetical protein compare
MMP_RS08620 +0.3 1.8 flagellar accessory protein FlaH compare
MMP_RS01190 +0.3 2.1 cadmium-translocating P-type ATPase compare
MMP_RS01120 +0.3 1.8 permease compare
MMP_RS06225 +0.3 1.5 DNA double-strand break repair nuclease NurA compare
MMP_RS06145 +0.3 3.0 hypothetical protein compare
MMP_RS08775 +0.3 1.6 methanogenesis marker 9 domain-containing protein compare
MMP_RS09065 +0.3 2.2 hypothetical protein compare
MMP_RS06080 +0.3 2.1 radical SAM protein compare
MMP_RS08490 +0.3 2.8 hypothetical protein compare
MMP_RS05985 +0.3 0.8 hypothetical protein compare
MMP_RS09060 +0.3 2.3 hypothetical protein compare
MMP_RS08980 +0.3 1.2 hypothetical protein compare
MMP_RS06715 +0.3 2.3 cache domain-containing protein compare
MMP_RS06575 +0.3 1.5 fluoride efflux transporter CrcB compare
MMP_RS08080 +0.3 1.8 YchF/TatD family DNA exonuclease compare
MMP_RS06045 +0.3 1.9 DNA polymerase compare
MMP_RS03550 +0.3 0.6 DUF2124 domain-containing protein compare
MMP_RS06735 +0.3 1.1 class I SAM-dependent rRNA methyltransferase compare
MMP_RS05975 +0.3 0.6 hypothetical protein compare
MMP_RS02175 +0.3 0.3 DUF1611 domain-containing protein compare
MMP_RS06015 +0.3 1.5 flavodoxin family protein compare
MMP_RS03990 +0.3 1.5 recombinase family protein compare
MMP_RS08725 +0.3 0.3 Ni/Fe hydrogenase subunit alpha compare
MMP_RS08665 +0.3 2.3 hypothetical protein compare
MMP_RS03220 +0.3 1.0 RNA 2' 3'-cyclic phosphodiesterase compare
MMP_RS06065 +0.3 2.5 iron ABC transporter substrate-binding protein compare
MMP_RS06250 +0.3 2.3 hypothetical protein compare
MMP_RS01145 +0.3 1.8 ABC transporter ATP-binding protein compare
MMP_RS04995 +0.3 1.7 hypothetical protein compare
MMP_RS07145 +0.3 1.4 AmmeMemoRadiSam system protein B compare
MMP_RS04190 +0.3 1.3 hypothetical protein compare
MMP_RS01150 +0.3 1.4 aldo/keto reductase compare
MMP_RS07805 +0.3 1.7 ABC transporter permease compare
MMP_RS07855 +0.3 1.6 class I SAM-dependent methyltransferase compare
MMP_RS01685 +0.3 1.1 indolepyruvate oxidoreductase subunit beta compare
MMP_RS05660 +0.3 1.9 phosphate ABC transporter substrate-binding protein compare
MMP_RS06760 +0.3 0.8 hypothetical protein compare
MMP_RS06115 +0.3 2.2 class II aldolase/adducin family protein compare
MMP_RS03870 +0.3 1.2 purine NTPase compare
MMP_RS05695 +0.3 1.3 phospholipase D-like domain-containing protein compare
MMP_RS02375 +0.3 2.1 hypothetical protein compare
MMP_RS01135 +0.3 2.0 molybdate ABC transporter substrate-binding protein compare
MMP_RS03090 +0.3 1.4 cation:proton antiporter compare
MMP_RS03320 +0.3 0.8 metal-dependent transcriptional regulator compare
MMP_RS02200 +0.3 1.8 methyl-accepting chemotaxis protein compare
MMP_RS08755 +0.3 1.9 sodium:solute symporter family protein compare
MMP_RS04060 +0.3 1.2 hypothetical protein compare
MMP_RS08625 +0.3 1.8 type II/IV secretion system ATPase subunit compare
MMP_RS08235 +0.3 1.6 hypothetical protein compare
MMP_RS01620 +0.3 1.0 hypothetical protein compare
MMP_RS04145 +0.3 0.5 hypothetical protein compare
MMP_RS00665 +0.3 0.9 hypothetical protein compare
MMP_RS02985 +0.3 0.6 hypothetical protein compare
MMP_RS02295 +0.3 1.6 TatD family hydrolase compare
MMP_RS08750 +0.3 1.1 hypothetical protein compare
MMP_RS04635 +0.3 1.6 GNAT family N-acetyltransferase compare
MMP_RS07095 +0.3 1.1 PspC domain-containing protein compare
MMP_RS07775 +0.3 0.9 alanine dehydrogenase compare
MMP_RS02510 +0.3 1.8 site-specific integrase compare
MMP_RS05995 +0.3 1.6 FprA family A-type flavoprotein compare
MMP_RS09030 +0.3 1.0 hypothetical protein compare
MMP_RS06000 +0.3 1.0 divalent-cation tolerance protein CutA compare
MMP_RS02540 +0.3 1.2 DUF2283 domain-containing protein compare
MMP_RS03235 +0.2 0.8 tRNA pseudouridine(13) synthase TruD compare
MMP_RS00335 +0.2 1.3 5-amino-6-(D-ribitylamino)uracil--L-tyrosine 4-hydroxyphenyl transferase CofH compare
MMP_RS05155 +0.2 1.1 hypothetical protein compare
MMP_RS02895 +0.2 1.3 DHH family phosphoesterase compare
MMP_RS07590 +0.2 1.5 hypothetical protein compare
MMP_RS01095 +0.2 1.3 iron ABC transporter permease compare
MMP_RS08475 +0.2 1.2 ABC transporter permease compare
MMP_RS00435 +0.2 1.5 CPBP family intramembrane metalloprotease compare
MMP_RS06585 +0.2 0.5 DMT family protein compare
MMP_RS04985 +0.2 1.0 DUF2180 family protein compare
MMP_RS06920 +0.2 1.4 AAA family ATPase compare
MMP_RS01060 +0.2 1.4 calcium/sodium antiporter compare
MMP_RS05665 +0.2 0.9 phosphate ABC transporter permease subunit PstC compare
MMP_RS06485 +0.2 0.3 zinc ribbon domain-containing protein compare
MMP_RS06570 +0.2 0.6 DUF190 domain-containing protein compare
MMP_RS00950 +0.2 1.3 site-2 protease family protein compare
MMP_RS03780 +0.2 1.1 4Fe-4S binding protein compare
MMP_RS06990 +0.2 0.8 CatB-related O-acetyltransferase compare
MMP_RS00390 +0.2 1.2 ammonium transporter compare
MMP_RS05900 +0.2 1.1 tetratricopeptide repeat protein compare
MMP_RS01115 +0.2 1.1 molybdopterin molybdotransferase MoeA compare
MMP_RS02315 +0.2 1.3 RimK family alpha-L-glutamate ligase compare
MMP_RS07905 +0.2 0.9 DUF3343 domain-containing protein compare
MMP_RS05715 +0.2 1.2 hypothetical protein compare
MMP_RS08990 +0.2 1.1 hypothetical protein compare
MMP_RS00770 +0.2 0.9 hypothetical protein compare
MMP_RS02020 +0.2 0.7 gamma-glutamylcyclotransferase compare
MMP_RS01180 +0.2 0.6 XTP/dITP diphosphatase compare
MMP_RS06050 +0.2 1.5 ZIP family metal transporter compare
MMP_RS02995 +0.2 0.6 acyl-CoA thioesterase compare
MMP_RS03950 +0.2 1.1 HNH endonuclease compare
MMP_RS07835 +0.2 0.8 TldD/PmbA family protein compare
MMP_RS05435 +0.2 1.3 5'/3'-nucleotidase SurE compare
MMP_RS05270 +0.2 1.6 PEGA domain-containing protein compare
MMP_RS06965 +0.2 0.9 TIGR04014 family B12-binding domain/radical SAM domain-containing protein compare
MMP_RS06560 +0.2 1.0 hypothetical protein compare
MMP_RS04825 +0.2 1.3 protein-glutamate O-methyltransferase CheR compare
MMP_RS01065 +0.2 1.4 alpha/beta hydrolase compare
MMP_RS05960 +0.2 1.5 CoB--CoM heterodisulfide reductase subunit B compare
MMP_RS05675 +0.2 0.7 phosphate ABC transporter ATP-binding protein PstB compare
MMP_RS00395 +0.2 0.4 MGMT family protein compare
MMP_RS03965 +0.2 0.5 hypothetical protein compare
MMP_RS08470 +0.2 1.0 ATP-binding cassette domain-containing protein compare
MMP_RS07800 +0.2 1.1 ATP-binding cassette domain-containing protein compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis S2 in stress experiments

For stress potassium (poly)sulfide across organisms