Experiment set9IT043 for Methanococcus maripaludis S2

Compare to:

H2 McCas with 10 mM polysulfide

200 most important genes:

  gene name fitness t score description  
MMP_RS08720 -5.8 -2.3 4Fe-4S binding protein compare
MMP_RS05920 -5.7 -1.1 50S ribosomal protein L37e compare
MMP_RS05550 -5.6 -1.1 cation:proton antiporter compare
MMP_RS07755 -5.6 -1.6 DUF555 domain-containing protein compare
MMP_RS07390 -5.3 -4.3 cell division protein FtsZ compare
MMP_RS01020 -5.2 -1.5 3 4-dihydroxy-2-butanone-4-phosphate synthase compare
MMP_RS08790 -4.5 -3.0 translation initiation factor IF-2 subunit alpha compare
MMP_RS01005 -4.4 -1.6 riboflavin synthase compare
MMP_RS02240 -4.1 -5.4 methanogenesis marker 7 protein compare
MMP_RS01175 -4.1 -5.4 triphosphoribosyl-dephospho-CoA synthase compare
MMP_RS08715 -4.0 -2.8 formylmethanofuran dehydrogenase subunit B compare
MMP_RS03640 -3.8 -5.4 archaeal proteasome endopeptidase complex subunit beta compare
MMP_RS02145 -3.8 -12.6 winged helix-turn-helix transcriptional regulator compare
MMP_RS01385 -3.8 -1.1 imidazole glycerol phosphate synthase subunit HisH compare
MMP_RS04775 -3.7 -5.1 adenosylhomocysteinase compare
MMP_RS02010 -3.7 -12.8 PHP domain-containing protein compare
MMP_RS08440 -3.6 -5.4 cell division protein SepF compare
MMP_RS03315 -3.6 -1.7 ferrous iron transport protein A compare
MMP_RS04890 -3.6 -1.7 adenylyltransferase/cytidyltransferase family protein compare
MMP_RS01885 -3.5 -13.4 Gfo/Idh/MocA family oxidoreductase compare
MMP_RS01875 -3.5 -12.5 N-acetyltransferase compare
MMP_RS03025 -3.5 -7.2 molybdenum cofactor guanylyltransferase compare
MMP_RS07075 -3.5 -7.1 phosphomannomutase/phosphoglucomutase compare
MMP_RS03600 -3.5 -3.6 triose-phosphate isomerase compare
MMP_RS01380 -3.5 -6.7 PHP domain-containing protein compare
MMP_RS03435 -3.5 -2.9 ketol-acid reductoisomerase compare
MMP_RS05250 -3.5 -3.3 NFYB/HAP3 family transcription factor subunit compare
MMP_RS08650 -3.4 -5.4 glutamine--fructose-6-phosphate transaminase (isomerizing) compare
MMP_RS03035 -3.4 -5.3 4-hydroxy-tetrahydrodipicolinate synthase compare
MMP_RS07635 -3.4 -8.6 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMP_RS00110 -3.4 -5.0 hypothetical protein compare
MMP_RS04090 -3.4 -5.9 hypothetical protein compare
MMP_RS03700 -3.4 -13.0 sodium:proton antiporter compare
MMP_RS01880 -3.3 -9.0 DegT/DnrJ/EryC1/StrS family aminotransferase compare
MMP_RS03475 -3.2 -1.1 hypothetical protein compare
MMP_RS00300 -3.2 -1.3 6 7-dimethyl-8-ribityllumazine synthase compare
MMP_RS06355 -3.2 -3.5 molybdenum cofactor biosynthesis protein MoaE compare
MMP_RS01905 -3.2 -17.8 glycosyltransferase compare
MMP_RS01900 -3.2 -16.7 hypothetical protein compare
MMP_RS03110 -3.2 -9.4 glycosyltransferase family 2 protein compare
MMP_RS04685 -3.1 -4.6 DUF126 domain-containing protein compare
MMP_RS06625 -3.1 -3.8 DNA primase compare
MMP_RS01960 -3.1 -1.7 hypothetical protein compare
MMP_RS06350 -3.1 -8.8 HesA/MoeB/ThiF family protein compare
MMP_RS02900 -3.1 -1.1 imidazoleglycerol-phosphate dehydratase HisB compare
MMP_RS08745 -3.1 -8.2 CDP-2 3-bis-(O-geranylgeranyl)-sn-glycerol synthase compare
MMP_RS06295 -3.1 -8.2 methanogenesis marker 14 protein compare
MMP_RS01890 -3.1 -5.6 nucleotide sugar dehydrogenase compare
MMP_RS05515 -3.1 -10.4 cyclic pyranopterin monophosphate synthase MoaC compare
MMP_RS03015 -3.1 -10.7 GTP 3' 8-cyclase MoaA compare
MMP_RS05930 -3.0 -3.4 3-isopropylmalate dehydratase large subunit compare
MMP_RS04720 -3.0 -4.1 DedA family protein compare
MMP_RS00515 -3.0 -2.1 DUF655 domain-containing protein compare
MMP_RS06895 -3.0 -2.1 selenocysteine-specific translation elongation factor compare
MMP_RS09020 -3.0 -3.0 hypothetical protein compare
MMP_RS02195 -3.0 -5.9 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase compare
MMP_RS07005 -3.0 -1.0 4Fe-4S binding protein compare
MMP_RS06900 -3.0 -3.5 coenzyme F420-reducing hydrogenase FrhD protein compare
MMP_RS01610 -3.0 -4.1 hypothetical protein compare
MMP_RS06925 -3.0 -3.9 ribonuclease VapC4 compare
MMP_RS01925 -2.9 -13.0 DUF1616 domain-containing protein compare
MMP_RS07605 -2.9 -6.3 diadenylate cyclase compare
MMP_RS05555 -2.9 -2.2 DUF4040 domain-containing protein compare
MMP_RS01955 -2.9 -3.9 hypothetical protein compare
MMP_RS03400 -2.9 -4.9 archease compare
MMP_RS07380 -2.8 -2.5 transcription elongation factor Spt5 compare
MMP_RS07750 -2.8 -9.0 DUF357 domain-containing protein compare
MMP_RS00305 -2.8 -2.6 phosphoribosyl-ATP diphosphatase compare
MMP_RS06975 -2.8 -3.4 sulfide-dependent adenosine diphosphate thiazole synthase compare
MMP_RS07730 -2.8 -3.1 pyruvate synthase subunit beta compare
MMP_RS08300 -2.8 -2.1 metal-sulfur cluster assembly factor compare
MMP_RS01895 -2.8 -18.1 flippase compare
MMP_RS07600 -2.7 -3.2 Ni-sirohydrochlorin a c-diamide synthase compare
MMP_RS08435 -2.7 -4.1 Era-like GTP-binding protein compare
MMP_RS02800 -2.7 -7.3 nucleotidyltransferase domain-containing protein compare
MMP_RS05640 -2.7 -9.3 UTP--glucose-1-phosphate uridylyltransferase GalU compare
MMP_RS00040 -2.7 -5.4 TIGR03576 family pyridoxal phosphate-dependent enzyme compare
MMP_RS06980 -2.6 -12.6 tRNA 2-thiocytidine biosynthesis TtcA family protein compare
MMP_RS06285 -2.6 -2.4 precorrin-6Y C5 15-methyltransferase (decarboxylating) subunit CbiT compare
MMP_RS00810 -2.6 -11.9 topoisomerase DNA-binding C4 zinc finger domain-containing protein compare
MMP_RS00895 -2.6 -5.8 hypothetical protein compare
MMP_RS01325 -2.6 -3.0 dihydroneopterin aldolase family protein compare
MMP_RS01795 -2.6 -2.7 methanogenesis marker 6 protein compare
MMP_RS06340 -2.5 -8.9 phosphoadenosine phosphosulfate reductase family protein compare
MMP_RS01265 -2.5 -4.8 hypothetical protein compare
MMP_RS06230 -2.5 -4.4 helix-turn-helix domain-containing protein compare
MMP_RS06270 -2.5 -7.5 TIGR00300 family protein compare
MMP_RS08635 -2.5 -2.5 UbiA family prenyltransferase compare
MMP_RS00900 -2.5 -3.1 50S ribosomal protein L39e compare
MMP_RS08595 -2.5 -1.8 flagellar protein C compare
MMP_RS08820 -2.5 -7.8 hypothetical protein compare
MMP_RS03095 -2.5 -9.1 diphthine synthase compare
MMP_RS07580 -2.5 -3.8 DUF356 domain-containing protein compare
MMP_RS01225 -2.4 -7.4 DUF5379 domain-containing protein compare
MMP_RS06670 -2.4 -7.1 glucose-6-phosphate isomerase compare
MMP_RS04585 -2.4 -12.3 AIR synthase related protein compare
MMP_RS06400 -2.4 -2.0 4Fe-4S binding protein compare
MMP_RS01725 -2.4 -5.7 class I SAM-dependent methyltransferase family protein compare
MMP_RS06120 -2.4 -3.6 UPF0147 family protein compare
MMP_RS02875 -2.4 -13.7 chorismate pyruvate-lyase family protein compare
MMP_RS06395 -2.3 -3.6 ThiF family adenylyltransferase compare
MMP_RS03205 -2.3 -2.7 peptidyl-tRNA hydrolase Pth2 compare
MMP_RS05265 -2.3 -3.4 2-isopropylmalate synthase compare
MMP_RS06475 -2.3 -4.8 FAD-dependent oxidoreductase compare
MMP_RS00695 -2.3 -1.3 biotin--[acetyl-CoA-carboxylase] ligase compare
MMP_RS07555 -2.3 -0.9 monovalent cation/H+ antiporter subunit E compare
MMP_RS02345 -2.3 -4.5 GTP-dependent dephospho-CoA kinase family protein compare
MMP_RS01910 -2.2 -12.3 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
MMP_RS03580 -2.2 -4.6 signal recognition particle-docking protein FtsY compare
MMP_RS04500 -2.2 -14.0 adenosylmethionine--8-amino-7-oxononanoate transaminase compare
MMP_RS05815 -2.2 -1.8 NOL1/NOP2/sun family putative RNA methylase compare
MMP_RS06730 -2.1 -2.2 phosphopantothenate/pantothenate synthetase compare
MMP_RS01830 -2.1 -2.6 tRNA-Val compare
MMP_RS05345 -2.1 -7.8 hypothetical protein compare
MMP_RS06315 -2.1 -1.5 cobalt-precorrin-7 (C(5))-methyltransferase compare
MMP_RS03445 -2.1 -1.4 methanogenesis marker 17 protein compare
MMP_RS03960 -2.1 -1.6 hypothetical protein compare
MMP_RS06725 -2.1 -12.0 hypothetical protein compare
MMP_RS08460 -2.1 -3.0 proteasome-activating nucleotidase compare
MMP_RS02135 -2.1 -5.2 DUF5612 domain-containing protein compare
MMP_RS01800 -2.1 -4.4 TIGR00303 family protein compare
MMP_RS00735 -2.1 -4.1 5 10-methenyltetrahydromethanopterin hydrogenase compare
MMP_RS00985 -2.1 -6.6 CDC48 family AAA ATPase compare
MMP_RS06885 -2.1 -3.3 50S ribosome-binding GTPase compare
MMP_RS05580 -2.0 -15.3 glycosyltransferase compare
MMP_RS01915 -2.0 -14.2 DUF354 domain-containing protein compare
MMP_RS04710 -2.0 -2.2 hypothetical protein compare
MMP_RS01220 -2.0 -7.0 hypothetical protein compare
MMP_RS00050 -2.0 -7.1 AarF/UbiB family protein compare
MMP_RS07845 -2.0 -3.2 LL-diaminopimelate aminotransferase compare
MMP_RS04955 -1.9 -5.5 DNA topoisomerase I compare
MMP_RS07875 -1.9 -5.1 hypothetical protein compare
MMP_RS08605 -1.9 -6.8 flagellar protein E compare
MMP_RS01500 -1.9 -2.8 CBS domain-containing protein compare
MMP_RS04780 -1.9 -3.8 ribonuclease P compare
MMP_RS02355 -1.9 -4.0 30S ribosomal protein S27ae compare
MMP_RS03140 -1.9 -10.3 hypothetical protein compare
MMP_RS06105 -1.9 -7.1 hydrogenase maturation peptidase HycI compare
MMP_RS01840 -1.9 -9.4 TIGR00289 family protein compare
MMP_RS06370 -1.9 -5.2 biotin synthase BioB compare
MMP_RS05425 -1.8 -5.3 monovalent cation/H+ antiporter complex subunit F compare
MMP_RS03145 -1.8 -5.9 fibrillarin-like rRNA/tRNA 2'-O-methyltransferase compare
MMP_RS00750 -1.8 -2.9 fumarate hydratase compare
MMP_RS02280 -1.8 -1.0 DUF211 domain-containing protein compare
MMP_RS01365 -1.8 -2.3 archaeal proteasome endopeptidase complex subunit alpha compare
MMP_RS08600 -1.8 -2.5 flagellar protein D compare
MMP_RS07545 -1.7 -1.2 HTH domain-containing protein compare
MMP_RS07710 -1.7 -8.0 cell division protein FtsZ compare
MMP_RS05500 -1.7 -6.9 2-isopropylmalate synthase compare
MMP_RS06110 -1.7 -3.9 ATP-dependent protease LonB compare
MMP_RS02930 -1.7 -3.7 class I SAM-dependent methyltransferase compare
MMP_RS08350 -1.7 -1.1 hypothetical protein compare
MMP_RS08100 -1.7 -5.6 8-amino-7-oxononanoate synthase compare
MMP_RS06630 -1.7 -1.1 UPF0058 family protein compare
MMP_RS07330 -1.7 -13.0 membrane protein compare
MMP_RS05635 -1.7 -7.5 NAD-dependent epimerase/dehydratase family protein compare
MMP_RS00315 -1.7 -5.3 Nif3-like dinuclear metal center hexameric protein compare
MMP_RS06865 -1.6 -1.6 HypC/HybG/HupF family hydrogenase formation chaperone compare
MMP_RS07955 -1.6 -4.8 FumA C-terminus/TtdB family hydratase beta subunit compare
MMP_RS07355 -1.6 -1.2 transcription factor S compare
MMP_RS07575 -1.6 -2.8 RNA ligase partner protein compare
MMP_RS01975 -1.6 -12.5 hypothetical protein compare
MMP_RS07630 -1.6 -1.7 ATP-binding cassette domain-containing protein compare
MMP_RS08330 -1.6 -5.6 NADH-quinone oxidoreductase subunit H compare
MMP_RS04850 -1.6 -10.4 UPF0254 family protein compare
MMP_RS07435 -1.6 -2.7 GMP synthase subunit A compare
MMP_RS07385 -1.6 -1.4 protein translocase SEC61 complex subunit gamma compare
MMP_RS01045 -1.6 -9.1 diphthamide biosynthesis enzyme Dph2 compare
MMP_RS07695 -1.5 -4.2 DUF3236 domain-containing protein compare
MMP_RS03155 -1.5 -6.6 precorrin-6A reductase compare
MMP_RS00720 -1.5 -8.4 metal-dependent hydrolase compare
MMP_RS06130 -1.5 -4.2 peptidylprolyl isomerase compare
MMP_RS05845 -1.5 -1.2 tRNA-intron lyase compare
MMP_RS07420 -1.5 -4.0 metalloregulator ArsR/SmtB family transcription factor compare
MMP_RS08105 -1.5 -6.2 6-carboxyhexanoate--CoA ligase compare
MMP_RS01575 -1.5 -4.9 aldolase compare
MMP_RS02245 -1.5 -3.8 hypothetical protein compare
MMP_RS06035 -1.4 -8.0 glycosyltransferase family 2 protein compare
MMP_RS05445 -1.4 -7.6 CoB--CoM heterodisulfide reductase subunit B compare
MMP_RS06020 -1.4 -4.0 archaeoflavoprotein AfpA compare
MMP_RS08165 -1.4 -1.2 phosphoglycerate dehydrogenase compare
MMP_RS07735 -1.4 -1.1 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha compare
MMP_RS05525 -1.4 -5.3 calcium/sodium antiporter compare
MMP_RS01720 -1.4 -0.9 replication factor C large subunit compare
MMP_RS07540 -1.4 -2.9 CBS domain-containing protein compare
MMP_RS06310 -1.4 -4.0 NAD(P)/FAD-dependent oxidoreductase compare
MMP_RS07820 -1.4 -4.1 UPF0104 family protein compare
MMP_RS00115 -1.4 -9.1 radical SAM protein compare
MMP_RS01240 -1.4 -1.4 7-cyano-7-deazaguanine synthase QueC compare
MMP_RS07615 -1.4 -7.0 energy-coupling factor ABC transporter permease compare
MMP_RS05925 -1.4 -3.2 small nuclear ribonucleoprotein compare
MMP_RS01920 -1.4 -9.6 glycosyltransferase family 2 protein compare
MMP_RS07525 -1.4 -5.1 4Fe-4S binding protein compare
MMP_RS05540 -1.4 -2.9 hypothetical protein compare
MMP_RS08155 -1.4 -6.8 hypothetical protein compare
MMP_RS01970 -1.3 -9.0 TIGR04279 domain-containing protein compare
MMP_RS08785 -1.3 -1.3 RNA-protein complex protein Nop10 compare
MMP_RS01545 -1.3 -1.4 CBS domain-containing protein compare
MMP_RS00685 -1.3 -3.4 2-phospho-L-lactate guanylyltransferase compare
MMP_RS00725 -1.3 -4.7 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdC compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis S2 in stress experiments

For stress potassium (poly)sulfide across organisms