Experiment set9IT043 for Bacteroides thetaiotaomicron VPI-5482

Compare to:

BHIS with Trimethoprim 0.00625 mM

200 most important genes:

  gene name fitness t score description  
BT1607 -4.2 -2.9 methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase (NCBI ptt file) compare
BT4330 -3.7 -7.1 xanthosine permease (NCBI ptt file) compare
BT3554 -3.7 -2.5 conserved hypothetical protein (NCBI ptt file) compare
BT4386 -3.6 -1.2 hypoxanthine-guanine phosphoribosyltransferase (NCBI ptt file) compare
BT0737 -3.6 -5.4 formate--tetrahydrofolate ligase (NCBI ptt file) compare
BT1193 -3.5 -2.4 conserved hypothetical protein (NCBI ptt file) compare
BT1071 -3.3 -2.2 hypothetical protein (NCBI ptt file) compare
BT2843 -3.2 -3.7 integrase (NCBI ptt file) compare
BT4610 -3.1 -2.5 RecA (NCBI ptt file) compare
BT1729 -3.0 -10.1 peptide chain release factor 3 (RF-3) (NCBI ptt file) compare
BT3074 -2.9 -6.2 conserved hypothetical protein (NCBI ptt file) compare
BT0735 -2.9 -4.6 aspartate decarboxylase AsdA (NCBI ptt file) compare
BT3694 -2.8 -1.3 glycosyltransferase (NCBI ptt file) compare
BT3980 -2.8 -1.4 hypothetical protein (NCBI ptt file) compare
BT2546 -2.8 -3.9 transcriptional regulator (NCBI ptt file) compare
BT4003 -2.7 -2.6 stationary-phase survival protein SurE (NCBI ptt file) compare
BT0180 -2.7 -8.6 5-methyltetrahydrofolate-homocysteine methyltransferase (NCBI ptt file) compare
BT4562 -2.6 -1.3 hypothetical protein (NCBI ptt file) compare
BT2157 -2.6 -3.6 3-keto-alpha-glucoside 1,2-lyase; 3-ketoglucose dehydratase (from data) compare
BT0848 -2.5 -2.3 hypothetical protein (NCBI ptt file) compare
BT4737 -2.4 -3.7 pyruvate formate-lyase activating enzyme (NCBI ptt file) compare
BT1117 -2.4 -2.1 conserved hypothetical protein, with a cAMP-binding domain (NCBI ptt file) compare
BT1881 -2.3 -2.6 purine nucleoside phosphorylase I (NCBI ptt file) compare
BT0887 -2.3 -2.3 conserved hypothetical protein (NCBI ptt file) compare
BT4678 -2.3 -7.6 L-serine dehydratase (NCBI ptt file) compare
BT2302 -2.2 -0.9 conserved protein found in conjugate transposon (NCBI ptt file) compare
BT0405 -2.2 -1.7 hypothetical protein (NCBI ptt file) compare
BT0875 -2.2 -4.9 beta-ureidopropionase (NCBI ptt file) compare
BT0378 -2.2 -2.4 capsular polysaccharide biosynthesis protein capD (NCBI ptt file) compare
BT0896 -2.2 -2.5 putative patatin-like phospholipase (NCBI ptt file) compare
BT4161 -2.2 -1.8 hypothetical protein (NCBI ptt file) compare
BT0722 -2.2 -3.7 conserved hypothetical protein, putative surface protein, function unknown (NCBI ptt file) compare
BT0018 -2.2 -2.8 hypothetical protein (NCBI ptt file) compare
BT1186 -2.1 -2.0 ABC transporter ATP-binding protein (NCBI ptt file) compare
BT0884 -2.1 -4.4 outer membrane efflux protein oprM precursor (NCBI ptt file) compare
BT0323 -2.1 -2.2 hypothetical protein (NCBI ptt file) compare
BT4738 -2.1 -7.5 formate acetyltransferase (NCBI ptt file) compare
BT2841 -2.1 -1.7 pyruvate kinase (NCBI ptt file) compare
BT1515 -2.1 -6.1 conserved hypothetical protein (NCBI ptt file) compare
BT0019 -2.1 -2.9 hypothetical protein (NCBI ptt file) compare
BT4649 -2.0 -1.1 hypothetical protein (NCBI ptt file) compare
BT0249 -2.0 -1.4 5-methyltetrahydrofolate--homocysteine methyltransferase or methionine synthase (NCBI ptt file) compare
BT1256 -2.0 -0.9 conserved hypothetical protein (NCBI ptt file) compare
BT3224 -2.0 -2.8 putative lysine decarboxylase (NCBI ptt file) compare
BT3729 -1.9 -2.6 putative protoporphyrinogen oxidase (NCBI ptt file) compare
BT4432 -1.9 -2.8 putative non-specific DNA-binding protein HU-1 (NCBI ptt file) compare
BT0292 -1.9 -3.8 conserved hypothetical protein (NCBI ptt file) compare
BT4018 -1.9 -1.4 hypothetical protein (NCBI ptt file) compare
BT0925 -1.9 -2.3 ABC transporter, ATP-binding protein (NCBI ptt file) compare
BT2130 -1.9 -3.7 uracil-DNA glycosylase (NCBI ptt file) compare
BT2173 -1.9 -6.2 hypothetical protein (NCBI ptt file) compare
BT1962 -1.9 -1.3 hypothetical protein (NCBI ptt file) compare
BT4644 -1.9 -3.0 putative anti-sigma factor (NCBI ptt file) compare
BT1375 -1.9 -4.9 aspartokinase (NCBI ptt file) compare
BT0374 -1.9 -2.7 conserved hypothetical protein (NCBI ptt file) compare
BT1542 -1.9 -6.4 putative pyridine nucleotide-disulfide oxidoreductase (NCBI ptt file) compare
BT4551 -1.9 -1.8 putative GTPase, ThdF family (NCBI ptt file) compare
BT0081 -1.9 -2.4 hypothetical protein (NCBI ptt file) compare
BT0827 -1.8 -2.0 hypothetical protein (NCBI ptt file) compare
BT4776 -1.8 -3.3 conserved protein found in conjugate transposon (NCBI ptt file) compare
BT4333 -1.8 -7.1 hypothetical protein (NCBI ptt file) compare
BT2153 -1.8 -2.1 putative Fe-S oxidoreductases (NCBI ptt file) compare
BT1348 -1.8 -4.3 CDP-abequose synthase (NCBI ptt file) compare
BT1564 -1.8 -1.8 conserved hypothetical protein (NCBI ptt file) compare
BT4428 -1.8 -2.8 hypothetical protein (NCBI ptt file) compare
BT0771 -1.8 -4.8 1,4-alpha-glucan branching enzyme (isoamylase or pullulanase type II) (NCBI ptt file) compare
BT3260 -1.8 -1.9 DNA polymerase I (NCBI ptt file) compare
BT0758 -1.7 -1.2 acetyltransferase (NCBI ptt file) compare
BT2938 -1.7 -3.0 putative glycosyltransferase (NCBI ptt file) compare
BT1804 -1.7 -3.3 electron transfer flavoprotein beta-subunit (NCBI ptt file) compare
BT3370 -1.7 -1.6 putative glycosyltransferase yibD (NCBI ptt file) compare
BT0061 -1.7 -2.1 putative tyrosine-protein kinase ptk (NCBI ptt file) compare
BT3191 -1.7 -3.8 hypothetical protein (NCBI ptt file) compare
BT0160 -1.7 -3.0 hypothetical protein (NCBI ptt file) compare
BT4730 -1.7 -2.1 hypothetical protein (NCBI ptt file) compare
BT3926 -1.7 -1.3 putative peptidase (NCBI ptt file) compare
BT4574 -1.7 -2.4 conserved hypothetical protein (NCBI ptt file) compare
BT0100 -1.7 -1.7 hypothetical protein (NCBI ptt file) compare
BT0122 -1.6 -4.2 3-oxoacyl-[acyl-carrier-protein] synthase III (NCBI ptt file) compare
BT3481 -1.6 -1.3 putative glutaminase A (NCBI ptt file) compare
BT0216 -1.6 -1.9 putative rubrerythrin (NCBI ptt file) compare
BT1081 -1.6 -1.3 recombination protein recR (NCBI ptt file) compare
BT0039 -1.6 -2.6 conserved hypothetical protein (NCBI ptt file) compare
p5482_02 -1.6 -5.7 hypothetical protein (NCBI) compare
BT1559 -1.6 -2.0 RNA polymerase ECF-type sigma factor (NCBI ptt file) compare
BT0820 -1.6 -2.3 conserved hypothetical protein (NCBI ptt file) compare
BT3371 -1.6 -2.3 putative glycosyltransferase yibD (NCBI ptt file) compare
BT1947 -1.6 -0.8 hypothetical protein (NCBI ptt file) compare
BT4331 -1.6 -7.1 conserved hypothetical protein (NCBI ptt file) compare
BT4237 -1.6 -3.0 tRNA pseudouridine synthase A (NCBI ptt file) compare
BT3770 -1.6 -1.2 transcriptional regulator (NCBI ptt file) compare
BT4554 -1.5 -4.2 purine nucleoside phosphorylase II (NCBI ptt file) compare
BT0437 -1.5 -1.3 N-acylglucosamine 2-epimerase (NCBI ptt file) compare
BT2987 -1.5 -2.1 hypothetical protein (NCBI ptt file) compare
BT_t17 pseudo-tRNA -1.5 -2.0 tRNA-OTHER (RefSeq) compare
BT1380 -1.5 -1.7 imidazole glycerol phosphate synthase subunit hisH (NCBI ptt file) compare
BT2170 -1.5 -3.8 hypothetical protein (NCBI ptt file) compare
BT0023 -1.5 -2.8 transposase (NCBI ptt file) compare
BT2172 -1.5 -7.5 putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) compare
BT2470 -1.5 -2.5 hypothetical protein (NCBI ptt file) compare
BT0067 -1.5 -1.3 hypothetical protein (NCBI ptt file) compare
BT1095 -1.5 -2.7 conserved hypothetical protein (NCBI ptt file) compare
BT2418 -1.5 -3.3 hypothetical protein (NCBI ptt file) compare
BT0679 -1.5 -2.2 cation efflux system protein czcB (NCBI ptt file) compare
BT4618 -1.5 -1.4 conserved hypothetical protein (NCBI ptt file) compare
BT3220 -1.5 -6.9 TPR-repeat-containing protein (NCBI ptt file) compare
BT1836 -1.4 -5.6 thiamine biosynthesis protein ThiH (NCBI ptt file) compare
BT2282 -1.4 -2.0 conserved hypothetical protein (NCBI ptt file) compare
BT1667 -1.4 -0.9 hypothetical protein (NCBI ptt file) compare
BT1894 -1.4 -4.4 TPR-repeat-containing proteins (NCBI ptt file) compare
BT1726 -1.4 -2.3 integrase (NCBI ptt file) compare
BT4046 -1.4 -1.0 conserved hypothetical protein (NCBI ptt file) compare
BT3629 -1.4 -3.5 hypothetical protein (NCBI ptt file) compare
BT0004 -1.4 -1.6 hypothetical protein (NCBI ptt file) compare
BT2732 -1.4 -4.6 hypothetical protein (NCBI ptt file) compare
BT2799 -1.4 -2.9 putative PfkB family carbohydrate kinase (NCBI ptt file) compare
BT3223 -1.4 -3.0 hypothetical protein (NCBI ptt file) compare
BT0708 -1.4 -1.7 hypothetical protein (NCBI ptt file) compare
BT4702 -1.4 -1.4 dihydroxynapthoic acid synthetase (NCBI ptt file) compare
BT3266 -1.4 -5.7 excinuclease ABC subunit C (NCBI ptt file) compare
BT1125 -1.4 -1.3 hypothetical protein (NCBI ptt file) compare
BT1583 -1.4 -1.5 putative protein disulfide isomerase (NCBI ptt file) compare
BT2435 -1.4 -2.3 MarR family transcriptional regulator (NCBI ptt file) compare
BT0161 -1.4 -2.6 putative permease (NCBI ptt file) compare
BT0208 -1.3 -2.3 hypothetical protein (NCBI ptt file) compare
BT0723 -1.3 -1.2 hypothetical protein (NCBI ptt file) compare
BT1480 -1.3 -4.5 hypothetical protein (NCBI ptt file) compare
BT1192 -1.3 -2.8 putative xylanase (NCBI ptt file) compare
BT4332 -1.3 -2.4 conserved hypothetical protein (NCBI ptt file) compare
BT1208 -1.3 -1.6 conserved hypothetical protein (NCBI ptt file) compare
BT1825 -1.3 -2.8 conserved hypothetical protein (NCBI ptt file) compare
BT1234 -1.3 -1.6 conserved hypothetical protein (NCBI ptt file) compare
BT0376 -1.3 -0.9 putative transcriptional regulator (NCBI ptt file) compare
BT3431 -1.3 -2.3 DNA repair protein (NCBI ptt file) compare
BT1752 -1.3 -1.6 hypothetical protein (NCBI ptt file) compare
BT1837 -1.3 -3.1 putative GTP-binding protein, putative GTPase (NCBI ptt file) compare
BT3325 -1.3 -4.5 hypothetical protein (NCBI ptt file) compare
BT4501 -1.3 -3.1 ribosomal large subunit pseudouridine synthase A (NCBI ptt file) compare
BT1567 -1.3 -1.5 conserved hypothetical protein (NCBI ptt file) compare
BT2161 -1.3 -1.3 50S ribosomal protein L9 (NCBI ptt file) compare
BT4515 -1.3 -2.5 hypothetical protein (NCBI ptt file) compare
BT2993 -1.3 -2.5 hypothetical protein (NCBI ptt file) compare
BT2265 -1.3 -2.6 hypothetical protein (NCBI ptt file) compare
BT0091 -1.3 -2.7 conserved protein found in conjugate transposon (NCBI ptt file) compare
BT3973 -1.3 -1.6 S-adenosylmethionine:tRNA ribosyltransferase-isomerase (NCBI ptt file) compare
BT0740 -1.3 -0.8 flavoredoxin (NCBI ptt file) compare
BT0959 -1.3 -3.2 conserved hypothetical protein (NCBI ptt file) compare
BT0616 -1.2 -1.4 conserved hypothetical protein (NCBI ptt file) compare
BT1739 -1.2 -5.6 excinuclease ABC subunit A (NCBI ptt file) compare
BT2419 -1.2 -4.1 putative GMP synthase [glutamine-hydrolyzing] (NCBI ptt file) compare
BT0621 -1.2 -1.8 Na+-transporting NADH:ubiquinone oxidoreductase, Electron transport complex protein rnfE (NCBI ptt file) compare
BT1346 -1.2 -4.0 capsule biosynthesis protein capA (NCBI ptt file) compare
BT1779 -1.2 -4.2 sialic acid-specific 9-O-acetylesterase (NCBI ptt file) compare
BT0897 -1.2 -4.8 chaperone protein htpG (heat shock protein htpG) (NCBI ptt file) compare
BT0431 -1.2 -2.9 conserved hypothetical protein with conserved domain (NCBI ptt file) compare
BT0427 -1.2 -1.1 xanthine phosphoribosyltransferase (NCBI ptt file) compare
BT3669 -1.2 -2.4 conserved hypothetical protein (NCBI ptt file) compare
BT1339 -1.2 -3.6 undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase (NCBI ptt file) compare
BT1361 -1.2 -2.6 DNA repair protein recN (Recombination protein N) (NCBI ptt file) compare
BT4315 -1.2 -4.9 HPr(Ser) phosphatase (NCBI ptt file) compare
BT0396 -1.2 -4.1 putative UDP-GlcNAc:undecaprenylphosphate GlcNAc-1-phosphate transferase (NCBI ptt file) compare
BT4104 -1.2 -6.1 DNA helicase (NCBI ptt file) compare
BT0542 -1.2 -1.8 conserved hypothetical protein (NCBI ptt file) compare
BT0223 -1.2 -1.8 two-component system response regulator (NCBI ptt file) compare
BT0252 -1.2 -4.4 transcription-repair coupling factor (NCBI ptt file) compare
BT4473 -1.2 -5.1 putative purine permease (NCBI ptt file) compare
BT1062 -1.2 -3.4 hypothetical protein (NCBI ptt file) compare
BT3460 -1.2 -4.0 dGTP triphosphohydrolase (NCBI ptt file) compare
BT4658 -1.2 -3.3 glucuronyl hydrolase (NCBI ptt file) compare
BT2275 -1.2 -3.4 thymidine kinase (NCBI ptt file) compare
BT0683 -1.2 -3.9 alpha-glucosidase (NCBI ptt file) compare
BT1506 -1.2 -2.4 hypothetical protein (NCBI ptt file) compare
BT4764 -1.2 -0.9 hypothetical protein (NCBI ptt file) compare
BT0519 -1.2 -2.2 hypothetical protein (NCBI ptt file) compare
BT4255 -1.2 -2.0 DNA replication and repair protein RecF, ABC family ATPase (NCBI ptt file) compare
BT3891 -1.2 -0.8 hypothetical protein (NCBI ptt file) compare
BT3996 -1.1 -3.6 putative peptidase (NCBI ptt file) compare
BT2467 -1.1 -2.1 hypothetical protein (NCBI ptt file) compare
BT4208 -1.1 -3.2 phosphohydrolase (NCBI ptt file) compare
BT4304 -1.1 -5.8 putative glycosyltransferase (NCBI ptt file) compare
BT1342 -1.1 -4.5 putative UDP-glucuronic acid epimerase (NCBI ptt file) compare
BT2973 -1.1 -2.3 transcriptional regulator (NCBI ptt file) compare
BT4002 -1.1 -0.8 ATPase, ParA family (NCBI ptt file) compare
BT2487 -1.1 -1.0 hypothetical protein (NCBI ptt file) compare
BT1705 -1.1 -2.0 hypothetical protein (NCBI ptt file) compare
BT3231 -1.1 -4.4 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase (NCBI ptt file) compare
BT4704 -1.1 -3.7 O-succinylbenzoic acid--CoA ligase (NCBI ptt file) compare
BT2441 -1.1 -3.6 putative 5'-nucleotidase/2',3'-cyclic phosphodiesterase (NCBI ptt file) compare
BT0739 -1.1 -1.4 hypothetical protein (NCBI ptt file) compare
BT3748 -1.1 -4.4 RNA polymerase ECF-type sigma factor (NCBI ptt file) compare
BT3268 -1.1 -1.7 glucose-inhibited division protein A (NCBI ptt file) compare
BT0678 -1.1 -1.6 cation efflux system protein czcC (NCBI ptt file) compare
BT3374 -1.1 -4.2 putative carbamoyl-phosphate-synthetase (NCBI ptt file) compare
BT4414 -1.1 -1.0 hypothetical protein (NCBI ptt file) compare
BT3801 -1.1 -1.9 rteB, two-component system response regulator (NCBI ptt file) compare
BT2691 -1.1 -1.6 methenyltetrahydrofolate cyclohydrolase (NCBI ptt file) compare
BT0951 -1.1 -2.7 hypothetical protein (NCBI ptt file) compare
BT2323 -1.1 -2.4 conserved hypothetical protein (NCBI ptt file) compare
BT2931 -1.1 -1.6 hypothetical protein (NCBI ptt file) compare
BT1428 -1.1 -1.8 conserved hypothetical protein (NCBI ptt file) compare


Specific Phenotypes

For 13 genes in this experiment

For stress Trimethoprim in Bacteroides thetaiotaomicron VPI-5482

For stress Trimethoprim across organisms