Experiment set9IT041 for Klebsiella michiganensis M5al

Compare to:

LB in EcoFAB_3.5mL with sand

200 most important genes:

  gene name fitness t score description  
BWI76_RS24900 -5.0 -2.8 DeoR family transcriptional regulator compare
BWI76_RS23240 -4.8 -3.3 exonuclease V subunit gamma compare
BWI76_RS26085 -4.6 -2.6 3-dehydroquinate synthase compare
BWI76_RS01210 -3.4 -2.3 tyrosine recombinase XerC compare
BWI76_RS01185 -3.2 -3.0 adenylate cyclase compare
BWI76_RS23230 -3.1 -4.7 exodeoxyribonuclease V subunit beta compare
BWI76_RS09660 -3.0 -2.0 DNA translocase FtsK compare
BWI76_RS09645 -2.7 -1.4 thioredoxin-disulfide reductase compare
BWI76_RS02410 -2.7 -2.4 EF-P beta-lysylation protein EpmB compare
BWI76_RS00400 -2.6 -2.1 glutamine synthetase compare
BWI76_RS20650 -2.4 -2.4 phosphoenolpyruvate--protein phosphotransferase compare
BWI76_RS04715 -2.4 -1.9 division/cell wall cluster transcriptional repressor MraZ compare
BWI76_RS23885 -2.2 -1.9 2-octaprenylphenol hydroxylase compare
BWI76_RS08535 -2.0 -2.4 translocation protein TolB compare
BWI76_RS21140 -2.0 -3.2 molecular chaperone HscA compare
BWI76_RS08405 -2.0 -3.3 succinate dehydrogenase flavoprotein subunit compare
BWI76_RS01200 -1.8 -1.9 diaminopimelate epimerase compare
BWI76_RS16485 -1.8 -1.7 ribonuclease T compare
BWI76_RS08430 -1.8 -4.7 succinate--CoA ligase subunit alpha compare
BWI76_RS01350 -1.7 -1.2 NAD(P)H-flavin reductase compare
BWI76_RS10990 -1.7 -3.0 dihydroorotase compare
BWI76_RS26620 -1.6 -1.2 Fe-S biogenesis protein NfuA compare
BWI76_RS20155 -1.6 -1.5 NADH-quinone oxidoreductase subunit I compare
BWI76_RS00180 -1.6 -2.1 F0F1 ATP synthase subunit epsilon compare
BWI76_RS20150 -1.5 -2.3 NADH:ubiquinone oxidoreductase subunit J compare
BWI76_RS01540 -1.5 -2.3 thiamine biosynthesis protein ThiS compare
BWI76_RS00240 -1.5 -1.6 FMN-binding protein MioC compare
BWI76_RS00140 -1.5 -1.1 phosphate transport system regulator PhoU compare
BWI76_RS16090 -1.5 -2.5 two-component system response regulator DcuR compare
BWI76_RS08385 -1.5 -3.3 citrate (Si)-synthase compare
BWI76_RS15825 -1.5 -0.9 hypothetical protein compare
BWI76_RS01800 -1.5 -3.5 glucose-6-phosphate isomerase compare
BWI76_RS17155 -1.5 -1.7 hypothetical protein compare
BWI76_RS01385 -1.5 -2.4 potassium transporter compare
BWI76_RS08425 -1.4 -3.9 succinyl-CoA ligase subunit beta compare
BWI76_RS15290 -1.4 -1.3 transcriptional regulator compare
BWI76_RS23140 -1.4 -1.9 carboxysome shell protein compare
BWI76_RS26075 -1.4 -3.4 DNA adenine methylase compare
BWI76_RS00355 -1.4 -2.7 DNA polymerase I compare
BWI76_RS11900 -1.4 -1.1 cob(I)yrinic acid a,c-diamide adenosyltransferase compare
BWI76_RS18125 -1.4 -2.0 murein DD-endopeptidase MepM compare
BWI76_RS23830 -1.4 -4.2 hypothetical protein compare
BWI76_RS08210 -1.3 -2.0 N-acetylglucosamine-6-phosphate deacetylase compare
BWI76_RS07185 -1.3 -1.9 hypothetical protein compare
BWI76_RS23520 -1.3 -1.6 hypothetical protein compare
BWI76_RS25425 -1.3 -1.4 arginine repressor compare
BWI76_RS18755 -1.3 -1.0 adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase compare
BWI76_RS14005 -1.3 -1.5 TetR family transcriptional regulator compare
BWI76_RS01650 -1.3 -3.7 acetyltransferase compare
BWI76_RS20895 -1.3 -4.5 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS01325 -1.3 -1.2 twin-arginine translocase subunit TatB compare
BWI76_RS08395 -1.2 -1.7 succinate dehydrogenase cytochrome b556 large subunit compare
BWI76_RS20140 -1.2 -3.8 NADH-quinone oxidoreductase subunit L compare
BWI76_RS04970 -1.2 -2.1 ABC transporter permease compare
BWI76_RS17805 -1.2 -1.1 membrane protein compare
BWI76_RS08390 -1.2 -2.6 hypothetical protein compare
BWI76_RS15115 -1.2 -5.4 MFS transporter compare
BWI76_RS20180 -1.2 -2.8 NADH-quinone oxidoreductase subunit C/D compare
BWI76_RS15620 -1.2 -1.5 hypothetical protein compare
BWI76_RS01110 -1.2 -3.5 TDP-fucosamine acetyltransferase compare
BWI76_RS01095 -1.2 -2.5 UDP-N-acetyl-D-mannosamine dehydrogenase compare
BWI76_RS04705 -1.1 -4.5 DNA-binding transcriptional regulator FruR compare
BWI76_RS27440 -1.1 -2.3 DNA helicase RecG compare
BWI76_RS03045 -1.1 -1.1 hypothetical protein compare
BWI76_RS23820 -1.1 -1.8 flavodoxin FldB compare
BWI76_RS23265 -1.1 -2.2 hypothetical protein compare
BWI76_RS15350 -1.1 -0.9 hypothetical protein compare
BWI76_RS04510 -1.1 -1.3 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) compare
BWI76_RS26175 -1.1 -3.2 DeoR/GlpR family transcriptional regulator compare
BWI76_RS20170 -1.1 -4.2 NADH-quinone oxidoreductase subunit F compare
BWI76_RS00720 -1.1 -1.6 DNA-binding response regulator compare
BWI76_RS09530 -1.1 -0.9 hypothetical protein compare
BWI76_RS09190 -1.1 -1.8 hypothetical protein compare
BWI76_RS22975 -1.1 -2.6 tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA compare
BWI76_RS19865 -1.1 -1.2 ecotin compare
BWI76_RS25920 -1.1 -1.6 peptidylprolyl isomerase compare
BWI76_RS08525 -1.1 -2.2 colicin transporter compare
BWI76_RS21165 -1.1 -1.4 Fe-S cluster assembly transcriptional regulator IscR compare
BWI76_RS01220 -1.1 -4.7 DNA-dependent helicase II compare
BWI76_RS19850 -1.1 -1.7 tRNA-Pro compare
BWI76_RS11155 -1.1 -1.9 penicillin-binding protein activator LpoB compare
BWI76_RS21100 -1.1 -2.4 nucleoside-diphosphate kinase compare
BWI76_RS20130 -1.0 -4.5 NADH-quinone oxidoreductase subunit N compare
BWI76_RS13195 -1.0 -2.3 glutamate dehydrogenase compare
BWI76_RS10730 -1.0 -1.2 bifunctional glucose-1-phosphatase/inositol phosphatase compare
BWI76_RS16275 -1.0 -1.7 fumarate hydratase FumA compare
BWI76_RS27075 -1.0 -5.0 IclR family transcriptional regulator compare
BWI76_RS05120 -1.0 -5.0 bifunctional glycosyl transferase/transpeptidase compare
BWI76_RS05005 -1.0 -1.7 polynucleotide adenylyltransferase compare
BWI76_RS14065 -1.0 -1.5 hypothetical protein compare
BWI76_RS01115 -1.0 -2.1 dTDP-4-amino-4,6-dideoxygalactose transaminase compare
BWI76_RS00875 -1.0 -4.4 DNA-binding transcriptional regulator FabR compare
BWI76_RS24925 -1.0 -1.5 DnaA initiator-associating protein DiaA compare
BWI76_RS21370 -1.0 -1.4 ATP-dependent RNA helicase SrmB compare
BWI76_RS22840 -1.0 -1.3 transposase compare
BWI76_RS01165 -1.0 -4.4 protoheme IX biogenesis protein HemY compare
BWI76_RS14780 -1.0 -2.4 phosphotriesterase compare
BWI76_RS25980 -1.0 -2.5 hypothetical protein compare
BWI76_RS01120 -0.9 -3.4 O-antigen translocase compare
BWI76_RS15215 -0.9 -0.7 N-acetyltransferase compare
BWI76_RS16425 -0.9 -1.7 hypothetical protein compare
BWI76_RS08360 -0.9 -3.1 LamB/YcsF family protein compare
BWI76_RS25335 -0.9 -2.4 stringent starvation protein A compare
BWI76_RS17970 -0.9 -1.4 zinc metalloprotease HtpX compare
BWI76_RS01870 -0.9 -3.0 diacylglycerol kinase compare
BWI76_RS20190 -0.9 -2.3 NADH-quinone oxidoreductase subunit A compare
BWI76_RS20165 -0.9 -3.2 NADH-quinone oxidoreductase subunit G compare
BWI76_RS27780 -0.9 -1.2 hypothetical protein compare
BWI76_RS07070 -0.9 -3.1 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS16355 -0.9 -1.6 electron transport complex subunit A compare
BWI76_RS02815 -0.9 -1.3 fructose-bisphosphatase class I compare
BWI76_RS10935 -0.9 -3.3 glucan biosynthesis glucosyltransferase H compare
BWI76_RS22625 -0.9 -1.3 transcriptional regulator compare
BWI76_RS16470 -0.9 -1.0 transcriptional repressor NemR compare
BWI76_RS12460 -0.9 -1.5 envelope stress response membrane protein PspC compare
BWI76_RS06665 -0.9 -1.6 membrane protein compare
BWI76_RS14575 -0.9 -1.8 TENA/THI-4 family protein compare
BWI76_RS13435 -0.9 -1.0 hypothetical protein compare
BWI76_RS20135 -0.9 -3.2 NADH-quinone oxidoreductase subunit M compare
BWI76_RS16675 -0.9 -1.0 ABC transporter compare
BWI76_RS26875 -0.9 -1.6 dipeptide ABC transporter permease DppC compare
BWI76_RS18165 -0.8 -0.9 NUDIX pyrophosphatase compare
BWI76_RS15225 -0.8 -3.4 DeoR family transcriptional regulator compare
BWI76_RS01135 -0.8 -2.9 lipopolysaccharide N-acetylmannosaminouronosyltransferase compare
BWI76_RS11435 -0.8 -1.3 hypothetical protein compare
BWI76_RS08585 -0.8 -2.7 nicotinamide riboside transporter PnuC compare
BWI76_RS01195 -0.8 -1.1 membrane protein compare
BWI76_RS01125 -0.8 -2.7 4-alpha-L-fucosyltransferase compare
BWI76_RS26855 -0.8 -2.3 cellulose synthase operon protein YhjQ compare
BWI76_RS14935 -0.8 -0.9 NIPSNAP family containing protein compare
BWI76_RS13840 -0.8 -2.8 MBL fold metallo-hydrolase compare
BWI76_RS23895 -0.8 -0.9 Xaa-Pro aminopeptidase compare
BWI76_RS07740 -0.8 -1.1 Fe2+-enterobactin ABC transporter substrate-binding protein compare
BWI76_RS24850 -0.8 -3.8 DeoR family transcriptional regulator compare
BWI76_RS09910 -0.8 -6.1 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS24810 -0.8 -1.3 hypothetical protein compare
BWI76_RS08275 -0.8 -0.8 LexA regulated protein compare
BWI76_RS18455 -0.8 -1.0 tRNA-Ser compare
BWI76_RS06080 -0.8 -1.5 taurine dioxygenase compare
BWI76_RS00760 -0.8 -2.0 cell division protein FtsN compare
BWI76_RS03910 -0.8 -2.6 2-dehydro-3-deoxy-6-phosphogalactonate aldolase compare
BWI76_RS15570 -0.8 -2.4 phage antirepressor Ant compare
BWI76_RS16840 -0.8 -1.5 ABC transporter compare
BWI76_RS16920 -0.8 -1.1 3-(2,3-dihydroxyphenyl)propionate dioxygenase compare
BWI76_RS26850 -0.8 -3.5 cellulose synthase catalytic subunit (UDP-forming) compare
BWI76_RS26890 -0.8 -0.7 hypothetical protein compare
BWI76_RS26845 -0.8 -4.8 cellulose synthase regulator BcsB compare
BWI76_RS06285 -0.8 -3.6 peroxiredoxin compare
BWI76_RS02610 -0.8 -3.0 transcriptional regulator compare
BWI76_RS04645 -0.8 -4.1 3-dehydroquinase compare
BWI76_RS17310 -0.8 -1.2 AsnC family transcriptional regulator compare
BWI76_RS13175 -0.8 -1.4 NodT family RND efflux system outer membrane lipoprotein compare
BWI76_RS16945 -0.8 -2.3 4-hydroxyphenylpyruvate dioxygenase compare
BWI76_RS09015 -0.8 -2.2 aldo/keto reductase compare
BWI76_RS16500 -0.8 -1.7 superoxide dismutase [Fe] compare
BWI76_RS24100 -0.8 -2.3 YggS family pyridoxal phosphate enzyme compare
BWI76_RS14670 -0.7 -1.4 hypothetical protein compare
BWI76_RS19695 -0.7 -1.2 membrane protein compare
BWI76_RS06490 -0.7 -3.2 cytochrome ubiquinol oxidase subunit I compare
BWI76_RS01855 -0.7 -1.1 chorismate lyase compare
BWI76_RS08110 -0.7 -0.8 glutamate/aspartate ABC transporter substrate-binding protein compare
BWI76_RS01090 -0.7 -3.1 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
BWI76_RS17420 -0.7 -2.0 hypothetical protein compare
BWI76_RS07620 -0.7 -2.1 transcriptional regulator BetI compare
BWI76_RS15835 -0.7 -0.6 hypothetical protein compare
BWI76_RS27165 -0.7 -2.3 mannitol-1-phosphate 5-dehydrogenase compare
BWI76_RS15840 -0.7 -2.6 prophage protein compare
BWI76_RS20145 -0.7 -0.9 NADH-quinone oxidoreductase subunit K compare
BWI76_RS11635 -0.7 -0.9 ABC transporter compare
BWI76_RS21255 -0.7 -2.0 hypothetical protein compare
BWI76_RS25600 -0.7 -0.6 tRNA-Thr compare
BWI76_RS13720 -0.7 -2.4 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase compare
BWI76_RS24330 -0.7 -1.3 TIGR00156 family protein compare
BWI76_RS08205 -0.7 -2.7 DNA-binding transcriptional dual regulator NagC compare
BWI76_RS16900 -0.7 -0.9 4-hydroxy-2-oxovalerate aldolase compare
BWI76_RS04955 -0.7 -1.1 hypoxanthine phosphoribosyltransferase compare
BWI76_RS06950 -0.7 -1.5 ABC transporter ATP-binding protein compare
BWI76_RS23560 -0.7 -1.5 hypothetical protein compare
BWI76_RS14200 -0.7 -1.1 protocatechuate 4,5-dioxygenase compare
BWI76_RS07675 -0.7 -3.0 DeoR family transcriptional regulator compare
BWI76_RS13320 -0.7 -1.6 putative LpxA-like enzyme compare
BWI76_RS15235 -0.7 -1.2 hypothetical protein compare
BWI76_RS02445 -0.7 -1.3 fumarate reductase subunit C compare
BWI76_RS12080 -0.7 -1.4 hypothetical protein compare
BWI76_RS01720 -0.7 -2.5 L-sorbose 1-phosphate reductase (EC 1.1.1.-) (from data) compare
BWI76_RS26190 -0.7 -2.3 glycerol-3-phosphate dehydrogenase compare
BWI76_RS19375 -0.7 -1.1 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase compare
BWI76_RS11965 -0.7 -2.3 orotidine-5'-phosphate decarboxylase compare
BWI76_RS13895 -0.7 -1.1 LysR family transcriptional regulator compare
BWI76_RS11365 -0.7 -1.2 iron ABC transporter compare
BWI76_RS11665 -0.7 -2.0 exodeoxyribonuclease III compare
BWI76_RS06485 -0.7 -1.3 cytochrome o ubiquinol oxidase subunit III compare
BWI76_RS14320 -0.7 -1.5 hypothetical protein compare
BWI76_RS23070 -0.7 -2.6 cobalt-precorrin-7 (C(5))-methyltransferase compare
BWI76_RS25355 -0.7 -3.7 cell division protein ZapE compare
BWI76_RS10305 -0.7 -3.8 transposase compare
BWI76_RS26200 -0.7 -3.6 starch synthase compare
BWI76_RS16370 -0.7 -1.9 electron transport complex subunit D compare
BWI76_RS04275 -0.7 -3.2 molybdopterin adenylyltransferase compare
BWI76_RS20355 -0.7 -1.5 colicin V production protein compare


Specific Phenotypes

None in this experiment

For Klebsiella michiganensis M5al in ecofab experiments

For ecofab sand across organisms