Experiment set9IT040 for Methanococcus maripaludis S2

Compare to:

H2 McCas with 1 hour oxygen exposure

200 most detrimental genes:

  gene name fitness t score description  
MMP_RS01570 +1.5 3.2 hypothetical protein compare
MMP_RS03340 +1.3 1.4 ABC transporter ATP-binding protein compare
MMP_RS06540 +1.1 2.8 3-methyl-2-oxobutanoate dehydrogenase subunit VorB compare
MMP_RS00655 +1.0 3.8 hypothetical protein compare
MMP_RS08310 +1.0 2.6 TMEM165/GDT1 family protein compare
MMP_RS08835 +1.0 6.2 H(2)-dependent methylenetetrahydromethanopterin dehydrogenase-related protein compare
MMP_RS08390 +1.0 5.0 DUF5400 domain-containing protein compare
MMP_RS06325 +1.0 1.8 hypothetical protein compare
MMP_RS06905 +0.9 1.9 hypothetical protein compare
MMP_RS07925 +0.9 4.0 haloacid dehalogenase compare
MMP_RS06590 +0.9 3.3 GNAT family N-acetyltransferase compare
MMP_RS02045 +0.9 1.7 tRNA-Met compare
MMP_RS07840 +0.9 2.3 ribonuclease III compare
MMP_RS08265 +0.9 4.5 rubrerythrin compare
MMP_RS00705 +0.9 1.5 hypothetical protein compare
MMP_RS08700 +0.9 3.8 hypothetical protein compare
MMP_RS04145 +0.8 1.8 hypothetical protein compare
MMP_RS05675 +0.8 1.8 phosphate ABC transporter ATP-binding protein PstB compare
MMP_RS07850 +0.8 2.6 prephenate dehydratase compare
MMP_RS07765 +0.8 4.0 sodium:alanine symporter family protein compare
MMP_RS08415 +0.8 1.6 radical SAM protein compare
MMP_RS00345 +0.8 3.1 DUF2666 domain-containing protein compare
MMP_RS00675 +0.8 0.9 nitroreductase family protein compare
MMP_RS07915 +0.8 3.0 DUF4870 domain-containing protein compare
MMP_RS06335 +0.8 2.4 HAD family hydrolase compare
MMP_RS09035 +0.7 2.8 hypothetical protein compare
MMP_RS08775 +0.7 2.6 methanogenesis marker 9 domain-containing protein compare
MMP_RS07890 +0.7 1.9 OB-fold nucleic acid binding domain-containing protein compare
MMP_RS08470 +0.7 4.4 ATP-binding cassette domain-containing protein compare
MMP_RS03215 +0.7 5.4 MBL fold metallo-hydrolase compare
MMP_RS09060 +0.7 5.3 hypothetical protein compare
MMP_RS08325 +0.7 3.9 hypothetical protein compare
MMP_RS08280 +0.7 2.5 proteasome assembly chaperone family protein compare
MMP_RS06910 +0.7 3.6 RlmF-related methyltransferase compare
MMP_RS08455 +0.7 2.9 multiprotein bridging factor aMBF1 compare
MMP_RS06710 +0.7 3.5 selenium-binding protein compare
MMP_RS04035 +0.7 1.1 hypothetical protein compare
MMP_RS08245 +0.7 3.3 DUF4013 domain-containing protein compare
MMP_RS07150 +0.7 2.6 MTH895/ArsE family thioredoxin-like protein compare
MMP_RS06190 +0.7 3.5 tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO compare
MMP_RS07985 +0.7 4.7 nitroreductase family protein compare
MMP_RS08395 +0.7 3.0 DsrE family protein compare
MMP_RS08235 +0.7 3.7 hypothetical protein compare
MMP_RS08640 +0.7 4.1 TIM barrel protein compare
MMP_RS08980 +0.7 3.1 hypothetical protein compare
MMP_RS08480 +0.6 3.9 molybdate ABC transporter substrate-binding protein compare
MMP_RS08430 +0.6 2.5 HAD family hydrolase compare
MMP_RS05835 +0.6 0.6 secondary thiamine-phosphate synthase enzyme YjbQ compare
MMP_RS00395 +0.6 1.3 MGMT family protein compare
MMP_RS03305 +0.6 3.0 winged helix-turn-helix domain-containing protein compare
MMP_RS01055 +0.6 2.3 hypothetical protein compare
MMP_RS06875 +0.6 3.0 FAD-dependent oxidoreductase compare
MMP_RS07345 +0.6 3.0 glycine synthesis protein GlyXL (from data) compare
MMP_RS00290 +0.6 3.2 hypothetical protein compare
MMP_RS06575 +0.6 2.5 fluoride efflux transporter CrcB compare
MMP_RS07620 +0.6 2.4 energy-coupling factor ABC transporter substrate-binding protein compare
MMP_RS07910 +0.6 2.6 NAD(P)H-hydrate dehydratase compare
MMP_RS01260 +0.6 3.2 HDIG domain-containing protein compare
MMP_RS07095 +0.6 2.3 PspC domain-containing protein compare
MMP_RS08490 +0.6 4.2 hypothetical protein compare
MMP_RS05365 +0.6 1.0 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH compare
MMP_RS00990 +0.6 1.3 hypothetical protein compare
MMP_RS06525 +0.6 0.8 YciI family protein compare
MMP_RS06585 +0.6 1.2 DMT family protein compare
MMP_RS06365 +0.6 1.5 hypothetical protein compare
MMP_RS00155 +0.6 3.0 heavy metal-binding domain-containing protein compare
MMP_RS09065 +0.6 3.4 hypothetical protein compare
MMP_RS04100 +0.6 1.8 hypothetical protein compare
MMP_RS05720 +0.5 1.9 signal recognition particle subunit SRP19/SEC65 family protein compare
MMP_RS06440 +0.5 3.3 CBS domain-containing protein compare
MMP_RS08575 +0.5 4.3 hypothetical protein compare
MMP_RS08160 +0.5 2.0 EamA family transporter compare
MMP_RS01630 +0.5 3.7 N-glycosylase/DNA lyase compare
MMP_RS08215 +0.5 1.6 DUF483 domain-containing protein compare
MMP_RS08085 +0.5 3.2 hypothetical protein compare
MMP_RS07155 +0.5 2.9 MFS transporter compare
MMP_RS03220 +0.5 1.5 RNA 2' 3'-cyclic phosphodiesterase compare
MMP_RS03065 +0.5 1.5 AzlC family ABC transporter permease compare
MMP_RS01805 +0.5 1.6 NUDIX hydrolase compare
MMP_RS08705 +0.5 2.2 sulfopyruvate decarboxylase subunit beta compare
MMP_RS01475 +0.5 2.8 phosphosulfolactate synthase compare
MMP_RS08205 +0.5 2.7 stage II sporulation protein M compare
MMP_RS08755 +0.5 3.2 sodium:solute symporter family protein compare
MMP_RS06250 +0.5 2.7 hypothetical protein compare
MMP_RS07860 +0.5 0.4 hypothetical protein compare
MMP_RS06990 +0.5 2.1 CatB-related O-acetyltransferase compare
MMP_RS06165 +0.5 3.1 ABC transporter permease compare
MMP_RS06965 +0.5 2.0 TIGR04014 family B12-binding domain/radical SAM domain-containing protein compare
MMP_RS08285 +0.5 2.7 serine/threonine protein kinase compare
MMP_RS06305 +0.5 2.6 transporter substrate-binding domain-containing protein compare
MMP_RS08260 +0.5 2.5 DUF99 family protein compare
MMP_RS06495 +0.5 0.9 YkgJ family cysteine cluster protein compare
MMP_RS08080 +0.5 2.4 YchF/TatD family DNA exonuclease compare
MMP_RS02740 +0.5 2.2 hypothetical protein compare
MMP_RS03300 +0.5 0.4 TOBE domain-containing protein compare
MMP_RS00325 +0.5 0.9 RNA-binding protein compare
MMP_RS01650 +0.5 0.5 sulfurtransferase TusA family protein compare
MMP_RS08770 +0.5 1.9 hypothetical protein compare
MMP_RS07590 +0.5 2.4 hypothetical protein compare
MMP_RS06480 +0.5 2.4 ABC transporter substrate-binding protein compare
MMP_RS08090 +0.5 1.7 hypothetical protein compare
MMP_RS05470 +0.5 3.1 DUF523 and DUF1722 domain-containing protein compare
MMP_RS01965 +0.5 1.4 DUF1616 domain-containing protein compare
MMP_RS01150 +0.5 2.6 aldo/keto reductase compare
MMP_RS08380 +0.5 1.8 phosphatase PAP2 family protein compare
MMP_RS03910 +0.5 0.8 hypothetical protein compare
MMP_RS08410 +0.4 2.0 DUF169 domain-containing protein compare
MMP_RS06320 +0.4 1.8 hypothetical protein compare
MMP_RS02965 +0.4 1.6 carboxymuconolactone decarboxylase family protein compare
MMP_RS05660 +0.4 2.4 phosphate ABC transporter substrate-binding protein compare
MMP_RS00145 +0.4 2.2 ATP-dependent Clp protease proteolytic subunit compare
MMP_RS00400 +0.4 1.6 tributyrin esterase compare
MMP_RS06570 +0.4 1.1 DUF190 domain-containing protein compare
MMP_RS04015 +0.4 0.9 hypothetical protein compare
MMP_RS01775 +0.4 1.2 TIGR00297 family protein compare
MMP_RS00800 +0.4 2.0 Coenzyme F420 hydrogenase/dehydrogenase beta subunit C-terminal domain compare
MMP_RS07905 +0.4 1.6 DUF3343 domain-containing protein compare
MMP_RS01620 +0.4 1.5 hypothetical protein compare
MMP_RS06045 +0.4 2.7 DNA polymerase compare
MMP_RS00760 +0.4 2.3 branched-chain-amino-acid transaminase compare
MMP_RS02200 +0.4 2.9 methyl-accepting chemotaxis protein compare
MMP_RS06870 +0.4 1.6 DedA family protein compare
MMP_RS07100 +0.4 2.8 hypothetical protein compare
MMP_RS07970 +0.4 1.1 hypothetical protein compare
MMP_RS00565 +0.4 1.7 CBS domain-containing protein compare
MMP_RS06155 +0.4 1.4 DUF4186 domain-containing protein compare
MMP_RS02720 +0.4 1.2 molybdate ABC transporter substrate-binding protein compare
MMP_RS01580 +0.4 2.4 PQQ-binding-like beta-propeller repeat protein compare
MMP_RS02370 +0.4 1.8 NifB/NifX family molybdenum-iron cluster-binding protein compare
MMP_RS07145 +0.4 2.6 AmmeMemoRadiSam system protein B compare
MMP_RS08475 +0.4 2.1 ABC transporter permease compare
MMP_RS08240 +0.4 1.5 methanogenesis marker 16 metalloprotein compare
MMP_RS02375 +0.4 2.0 hypothetical protein compare
MMP_RS08555 +0.4 0.9 hypothetical protein compare
MMP_RS07885 +0.4 1.2 tripartite tricarboxylate transporter permease compare
MMP_RS06060 +0.4 2.1 hypothetical protein compare
MMP_RS00285 +0.4 2.0 TIGR04013 family B12-binding domain/radical SAM domain-containing protein compare
MMP_RS06610 +0.4 1.1 DUF2334 domain-containing protein compare
MMP_RS00195 +0.4 3.3 DUF4013 domain-containing protein compare
MMP_RS01160 +0.4 2.1 DMT family transporter compare
MMP_RS01455 +0.4 2.0 nickel pincer cofactor biosynthesis protein LarC compare
MMP_RS06075 +0.4 2.2 class I SAM-dependent methyltransferase compare
MMP_RS00430 +0.4 1.2 hypothetical protein compare
MMP_RS06375 +0.4 1.5 ATP-dependent sacrificial sulfur transferase LarE compare
MMP_RS00435 +0.4 2.4 CPBP family intramembrane metalloprotease compare
MMP_RS08725 +0.4 0.4 Ni/Fe hydrogenase subunit alpha compare
MMP_RS08400 +0.4 0.9 MJ0307 family thioredoxin compare
MMP_RS00710 +0.4 0.9 hypothetical protein compare
MMP_RS04815 +0.4 1.6 chemotaxis protein CheD compare
MMP_RS02300 +0.4 1.6 NAD(P)H-dependent oxidoreductase compare
MMP_RS06465 +0.4 2.3 NERD domain-containing protein compare
MMP_RS00645 +0.4 2.5 iron ABC transporter permease compare
MMP_RS03740 +0.4 1.3 indolepyruvate oxidoreductase subunit beta compare
MMP_RS06500 +0.4 2.2 ATP-binding protein compare
MMP_RS08130 +0.4 1.8 IGHMBP2 family helicase compare
MMP_RS03840 +0.3 1.6 hypothetical protein compare
MMP_RS07800 +0.3 1.7 ATP-binding cassette domain-containing protein compare
MMP_RS00105 +0.3 1.5 hypothetical protein compare
MMP_RS05140 +0.3 0.9 helix-turn-helix transcriptional regulator compare
MMP_RS07715 +0.3 2.1 YfcE family phosphodiesterase compare
MMP_RS04830 +0.3 2.3 chemotaxis protein CheC compare
MMP_RS04800 +0.3 1.8 chemotaxis protein CheW compare
MMP_RS08290 +0.3 1.4 DNA-binding protein Alba compare
MMP_RS08485 +0.3 1.8 tungstate ABC transporter substrate-binding protein WtpA compare
MMP_RS06185 +0.3 2.0 thermonuclease family protein compare
MMP_RS02815 +0.3 1.1 hypothetical protein compare
MMP_RS05900 +0.3 1.7 tetratricopeptide repeat protein compare
MMP_RS02295 +0.3 2.0 TatD family hydrolase compare
MMP_RS06145 +0.3 2.7 hypothetical protein compare
MMP_RS07805 +0.3 1.9 ABC transporter permease compare
MMP_RS00700 +0.3 1.9 OB-fold nucleic acid binding domain-containing protein compare
MMP_RS01660 +0.3 0.8 hypothetical protein compare
MMP_RS00280 +0.3 2.3 DUF2118 domain-containing protein compare
MMP_RS06735 +0.3 1.1 class I SAM-dependent rRNA methyltransferase compare
MMP_RS09030 +0.3 1.2 hypothetical protein compare
MMP_RS01155 +0.3 1.5 XRE family transcriptional regulator compare
MMP_RS06560 +0.3 1.9 hypothetical protein compare
MMP_RS06150 +0.3 2.2 hypothetical protein compare
MMP_RS00950 +0.3 1.4 site-2 protease family protein compare
MMP_RS08665 +0.3 2.6 hypothetical protein compare
MMP_RS06715 +0.3 2.1 cache domain-containing protein compare
MMP_RS06065 +0.3 2.4 iron ABC transporter substrate-binding protein compare
MMP_RS06225 +0.3 1.5 DNA double-strand break repair nuclease NurA compare
MMP_RS01115 +0.3 1.7 molybdopterin molybdotransferase MoeA compare
MMP_RS08685 +0.3 1.9 hypothetical protein compare
MMP_RS03965 +0.3 0.8 hypothetical protein compare
MMP_RS05715 +0.3 1.4 hypothetical protein compare
MMP_RS04205 +0.3 1.4 carboxymuconolactone decarboxylase family protein compare
MMP_RS02315 +0.3 1.4 RimK family alpha-L-glutamate ligase compare
MMP_RS01685 +0.3 1.0 indolepyruvate oxidoreductase subunit beta compare
MMP_RS05175 +0.3 0.9 hypothetical protein compare
MMP_RS02770 +0.3 1.4 hypothetical protein compare
MMP_RS01320 +0.3 1.1 hypothetical protein compare
MMP_RS01210 +0.3 1.7 sodium:solute symporter compare
MMP_RS01785 +0.3 1.5 hypothetical protein compare
MMP_RS01485 +0.3 1.5 right-handed parallel beta-helix repeat-containing protein compare
MMP_RS07595 +0.3 1.9 hypothetical protein compare
MMP_RS07855 +0.3 1.4 class I SAM-dependent methyltransferase compare
MMP_RS08405 +0.3 1.7 MFS transporter compare
MMP_RS08250 +0.3 1.4 pyruvate kinase compare


Specific Phenotypes

For 3 genes in this experiment