Experiment set9IT039 for Methanococcus maripaludis S2

Compare to:

H2 McCas with 40 minute oxygen exposure

200 most important genes:

  gene name fitness t score description  
MMP_RS03475 -5.5 -0.8 hypothetical protein compare
MMP_RS07075 -5.5 -5.3 phosphomannomutase/phosphoglucomutase compare
MMP_RS01885 -5.2 -13.4 Gfo/Idh/MocA family oxidoreductase compare
MMP_RS07005 -5.1 -0.7 4Fe-4S binding protein compare
MMP_RS05250 -4.9 -2.3 NFYB/HAP3 family transcription factor subunit compare
MMP_RS01875 -4.5 -13.7 N-acetyltransferase compare
MMP_RS01890 -4.5 -6.2 nucleotide sugar dehydrogenase compare
MMP_RS01500 -4.5 -2.8 CBS domain-containing protein compare
MMP_RS01880 -4.3 -11.4 DegT/DnrJ/EryC1/StrS family aminotransferase compare
MMP_RS05550 -4.2 -0.9 cation:proton antiporter compare
MMP_RS03640 -4.2 -5.2 archaeal proteasome endopeptidase complex subunit beta compare
MMP_RS01755 -4.2 -1.5 DUF2097 domain-containing protein compare
MMP_RS08790 -4.1 -2.5 translation initiation factor IF-2 subunit alpha compare
MMP_RS03015 -4.1 -11.1 GTP 3' 8-cyclase MoaA compare
MMP_RS06725 -4.0 -14.9 hypothetical protein compare
MMP_RS03035 -4.0 -5.6 4-hydroxy-tetrahydrodipicolinate synthase compare
MMP_RS05515 -4.0 -8.6 cyclic pyranopterin monophosphate synthase MoaC compare
MMP_RS07845 -4.0 -2.4 LL-diaminopimelate aminotransferase compare
MMP_RS08720 -3.9 -1.9 4Fe-4S binding protein compare
MMP_RS03315 -3.8 -1.6 ferrous iron transport protein A compare
MMP_RS07390 -3.8 -4.0 cell division protein FtsZ compare
MMP_RS01795 -3.8 -2.2 methanogenesis marker 6 protein compare
MMP_RS01225 -3.8 -5.4 DUF5379 domain-containing protein compare
MMP_RS01020 -3.7 -1.2 3 4-dihydroxy-2-butanone-4-phosphate synthase compare
MMP_RS05965 -3.7 -4.3 carboxymuconolactone decarboxylase family protein compare
MMP_RS02010 -3.7 -11.9 PHP domain-containing protein compare
MMP_RS00110 -3.7 -4.4 hypothetical protein compare
MMP_RS01175 -3.6 -6.2 triphosphoribosyl-dephospho-CoA synthase compare
MMP_RS01725 -3.5 -6.3 class I SAM-dependent methyltransferase family protein compare
MMP_RS06355 -3.5 -3.0 molybdenum cofactor biosynthesis protein MoaE compare
MMP_RS03025 -3.5 -7.6 molybdenum cofactor guanylyltransferase compare
MMP_RS05930 -3.5 -2.9 3-isopropylmalate dehydratase large subunit compare
MMP_RS08635 -3.5 -2.4 UbiA family prenyltransferase compare
MMP_RS00810 -3.5 -12.4 topoisomerase DNA-binding C4 zinc finger domain-containing protein compare
MMP_RS07635 -3.4 -8.1 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMP_RS06020 -3.4 -5.0 archaeoflavoprotein AfpA compare
MMP_RS06350 -3.4 -6.2 HesA/MoeB/ThiF family protein compare
MMP_RS01265 -3.4 -4.2 hypothetical protein compare
MMP_RS06295 -3.3 -7.8 methanogenesis marker 14 protein compare
MMP_RS06340 -3.3 -9.3 phosphoadenosine phosphosulfate reductase family protein compare
MMP_RS04090 -3.3 -4.1 hypothetical protein compare
MMP_RS01610 -3.3 -4.8 hypothetical protein compare
MMP_RS06895 -3.3 -1.9 selenocysteine-specific translation elongation factor compare
MMP_RS08745 -3.3 -7.1 CDP-2 3-bis-(O-geranylgeranyl)-sn-glycerol synthase compare
MMP_RS03700 -3.2 -13.1 sodium:proton antiporter compare
MMP_RS04615 -3.2 -5.0 PDGLE domain-containing protein compare
MMP_RS02345 -3.2 -3.9 GTP-dependent dephospho-CoA kinase family protein compare
MMP_RS01905 -3.2 -14.4 glycosyltransferase compare
MMP_RS02800 -3.2 -6.3 nucleotidyltransferase domain-containing protein compare
MMP_RS01925 -3.2 -8.4 DUF1616 domain-containing protein compare
MMP_RS01385 -3.2 -0.8 imidazole glycerol phosphate synthase subunit HisH compare
MMP_RS02145 -3.2 -9.4 winged helix-turn-helix transcriptional regulator compare
MMP_RS01005 -3.1 -1.6 riboflavin synthase compare
MMP_RS04890 -3.1 -1.2 adenylyltransferase/cytidyltransferase family protein compare
MMP_RS05555 -3.1 -1.5 DUF4040 domain-containing protein compare
MMP_RS01900 -3.1 -14.0 hypothetical protein compare
MMP_RS05920 -3.1 -0.9 50S ribosomal protein L37e compare
MMP_RS03580 -3.1 -4.8 signal recognition particle-docking protein FtsY compare
MMP_RS00040 -3.1 -8.5 TIGR03576 family pyridoxal phosphate-dependent enzyme compare
MMP_RS06900 -3.1 -2.6 coenzyme F420-reducing hydrogenase FrhD protein compare
MMP_RS03960 -3.1 -1.3 hypothetical protein compare
MMP_RS00750 -3.1 -2.5 fumarate hydratase compare
MMP_RS06395 -3.1 -4.2 ThiF family adenylyltransferase compare
MMP_RS04710 -3.1 -2.4 hypothetical protein compare
MMP_RS04685 -3.1 -4.3 DUF126 domain-containing protein compare
MMP_RS04585 -3.1 -13.8 AIR synthase related protein compare
MMP_RS08210 -3.1 -2.3 phosphatidylglycerophosphatase A compare
MMP_RS01380 -3.0 -6.3 PHP domain-containing protein compare
MMP_RS07755 -3.0 -1.5 DUF555 domain-containing protein compare
MMP_RS07380 -3.0 -2.9 transcription elongation factor Spt5 compare
MMP_RS08595 -3.0 -1.4 flagellar protein C compare
MMP_RS02195 -3.0 -5.0 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase compare
MMP_RS02875 -3.0 -11.5 chorismate pyruvate-lyase family protein compare
MMP_RS06105 -3.0 -10.8 hydrogenase maturation peptidase HycI compare
MMP_RS00305 -3.0 -2.5 phosphoribosyl-ATP diphosphatase compare
MMP_RS06980 -2.9 -9.0 tRNA 2-thiocytidine biosynthesis TtcA family protein compare
MMP_RS01220 -2.9 -8.7 hypothetical protein compare
MMP_RS06315 -2.9 -1.2 cobalt-precorrin-7 (C(5))-methyltransferase compare
MMP_RS05265 -2.9 -2.7 2-isopropylmalate synthase compare
MMP_RS08435 -2.9 -3.2 Era-like GTP-binding protein compare
MMP_RS03400 -2.9 -2.7 archease compare
MMP_RS00315 -2.9 -6.2 Nif3-like dinuclear metal center hexameric protein compare
MMP_RS08715 -2.8 -2.1 formylmethanofuran dehydrogenase subunit B compare
MMP_RS04720 -2.8 -4.7 DedA family protein compare
MMP_RS08440 -2.8 -4.5 cell division protein SepF compare
MMP_RS06925 -2.8 -3.2 ribonuclease VapC4 compare
MMP_RS03600 -2.8 -2.8 triose-phosphate isomerase compare
MMP_RS01325 -2.8 -2.8 dihydroneopterin aldolase family protein compare
MMP_RS07525 -2.8 -6.6 4Fe-4S binding protein compare
MMP_RS01335 -2.8 -2.6 prefoldin subunit beta compare
MMP_RS06885 -2.8 -3.4 50S ribosome-binding GTPase compare
MMP_RS05640 -2.7 -7.2 UTP--glucose-1-phosphate uridylyltransferase GalU compare
MMP_RS04955 -2.7 -8.0 DNA topoisomerase I compare
MMP_RS03390 -2.7 -10.6 malate dehydrogenase compare
MMP_RS05580 -2.7 -18.5 glycosyltransferase compare
MMP_RS05345 -2.7 -10.1 hypothetical protein compare
MMP_RS02245 -2.7 -4.2 hypothetical protein compare
MMP_RS02935 -2.7 -6.0 A24 family peptidase compare
MMP_RS04780 -2.7 -3.5 ribonuclease P compare
MMP_RS02355 -2.7 -3.8 30S ribosomal protein S27ae compare
MMP_RS06400 -2.6 -1.6 4Fe-4S binding protein compare
MMP_RS04850 -2.6 -16.4 UPF0254 family protein compare
MMP_RS05635 -2.6 -12.4 NAD-dependent epimerase/dehydratase family protein compare
MMP_RS07605 -2.6 -5.4 diadenylate cyclase compare
MMP_RS06120 -2.6 -2.9 UPF0147 family protein compare
MMP_RS06475 -2.6 -6.3 FAD-dependent oxidoreductase compare
MMP_RS00730 -2.6 -5.3 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdB compare
MMP_RS02885 -2.5 -13.4 molybdopterin biosynthesis protein compare
MMP_RS01545 -2.5 -1.4 CBS domain-containing protein compare
MMP_RS06630 -2.5 -1.2 UPF0058 family protein compare
MMP_RS08650 -2.5 -4.0 glutamine--fructose-6-phosphate transaminase (isomerizing) compare
MMP_RS00115 -2.5 -15.4 radical SAM protein compare
MMP_RS06230 -2.5 -3.5 helix-turn-helix domain-containing protein compare
MMP_RS07750 -2.5 -5.9 DUF357 domain-containing protein compare
MMP_RS03435 -2.5 -2.2 ketol-acid reductoisomerase compare
MMP_RS02135 -2.5 -6.0 DUF5612 domain-containing protein compare
MMP_RS05425 -2.5 -4.8 monovalent cation/H+ antiporter complex subunit F compare
MMP_RS08820 -2.5 -6.4 hypothetical protein compare
MMP_RS07330 -2.4 -19.0 membrane protein compare
MMP_RS07695 -2.4 -5.9 DUF3236 domain-containing protein compare
MMP_RS03095 -2.4 -6.5 diphthine synthase compare
MMP_RS07580 -2.4 -4.0 DUF356 domain-containing protein compare
MMP_RS09055 -2.4 -1.1 CAP domain-containing protein compare
MMP_RS00895 -2.4 -4.5 hypothetical protein compare
MMP_RS06035 -2.4 -12.5 glycosyltransferase family 2 protein compare
MMP_RS00985 -2.4 -7.2 CDC48 family AAA ATPase compare
MMP_RS08785 -2.4 -1.2 RNA-protein complex protein Nop10 compare
MMP_RS02900 -2.4 -0.8 imidazoleglycerol-phosphate dehydratase HisB compare
MMP_RS09020 -2.4 -1.8 hypothetical protein compare
MMP_RS05500 -2.3 -9.5 2-isopropylmalate synthase compare
MMP_RS02240 -2.3 -3.6 methanogenesis marker 7 protein compare
MMP_RS01365 -2.3 -2.3 archaeal proteasome endopeptidase complex subunit alpha compare
MMP_RS03110 -2.3 -5.4 glycosyltransferase family 2 protein compare
MMP_RS07545 -2.3 -1.1 HTH domain-containing protein compare
MMP_RS03445 -2.3 -1.1 methanogenesis marker 17 protein compare
MMP_RS08070 -2.3 -6.9 DUF2096 domain-containing protein compare
MMP_RS06670 -2.3 -5.2 glucose-6-phosphate isomerase compare
MMP_RS00735 -2.3 -4.2 5 10-methenyltetrahydromethanopterin hydrogenase compare
MMP_RS01800 -2.3 -5.2 TIGR00303 family protein compare
MMP_RS06625 -2.2 -2.1 DNA primase compare
MMP_RS04775 -2.2 -4.9 adenosylhomocysteinase compare
MMP_RS06270 -2.2 -6.4 TIGR00300 family protein compare
MMP_RS07955 -2.2 -6.4 FumA C-terminus/TtdB family hydratase beta subunit compare
MMP_RS07135 -2.2 -11.8 coenzyme F420 hydrogenase subunit beta compare
MMP_RS03125 -2.2 -6.3 cell division ATPase MinD compare
MMP_RS01840 -2.2 -9.2 TIGR00289 family protein compare
MMP_RS05440 -2.2 -9.9 winged helix-turn-helix transcriptional regulator compare
MMP_RS08320 -2.2 -4.8 molybdopterin molybdotransferase MoeA compare
MMP_RS07425 -2.2 -5.6 GTP-binding protein compare
MMP_RS01085 -2.1 -1.9 hypothetical protein compare
MMP_RS00725 -2.1 -4.7 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdC compare
MMP_RS05845 -2.1 -1.9 tRNA-intron lyase compare
MMP_RS04605 -2.1 -5.9 cobalt ECF transporter T component CbiQ compare
MMP_RS06110 -2.1 -3.0 ATP-dependent protease LonB compare
MMP_RS08300 -2.1 -1.3 metal-sulfur cluster assembly factor compare
MMP_RS09045 -2.1 -15.4 class III signal peptide-containing protein compare
MMP_RS08940 -2.1 -1.3 MetS family NSS transporter small subunit compare
MMP_RS01700 -2.1 -1.1 dihydroxy-acid dehydratase compare
MMP_RS04500 -2.1 -14.8 adenosylmethionine--8-amino-7-oxononanoate transaminase compare
MMP_RS08605 -2.1 -6.1 flagellar protein E compare
MMP_RS00300 -2.1 -0.9 6 7-dimethyl-8-ribityllumazine synthase compare
MMP_RS06975 -2.1 -2.4 sulfide-dependent adenosine diphosphate thiazole synthase compare
MMP_RS01955 -2.0 -2.9 hypothetical protein compare
MMP_RS07600 -2.0 -2.7 Ni-sirohydrochlorin a c-diamide synthase compare
MMP_RS07575 -2.0 -3.9 RNA ligase partner protein compare
MMP_RS06865 -2.0 -2.6 HypC/HybG/HupF family hydrogenase formation chaperone compare
MMP_RS07730 -2.0 -2.0 pyruvate synthase subunit beta compare
MMP_RS08590 -2.0 -5.2 flagellin compare
MMP_RS07700 -2.0 -8.4 DUF1188 domain-containing protein compare
MMP_RS00050 -2.0 -7.3 AarF/UbiB family protein compare
MMP_RS01195 -2.0 -1.2 metalloregulator ArsR/SmtB family transcription factor compare
MMP_RS07200 -1.9 -5.3 [5-(aminomethyl)furan-3-yl]methyl phosphate kinase compare
MMP_RS06285 -1.9 -2.2 precorrin-6Y C5 15-methyltransferase (decarboxylating) subunit CbiT compare
MMP_RS00685 -1.9 -4.8 2-phospho-L-lactate guanylyltransferase compare
MMP_RS00695 -1.9 -1.0 biotin--[acetyl-CoA-carboxylase] ligase compare
MMP_RS06175 -1.9 -6.5 winged helix-turn-helix transcriptional regulator compare
MMP_RS01895 -1.9 -11.0 flippase compare
MMP_RS00900 -1.9 -2.3 50S ribosomal protein L39e compare
MMP_RS01830 -1.9 -1.9 tRNA-Val compare
MMP_RS08630 -1.9 -8.1 archaellar assembly protein FlaJ compare
MMP_RS04900 -1.9 -13.8 hypothetical protein compare
MMP_RS05540 -1.9 -2.7 hypothetical protein compare
MMP_RS01295 -1.9 -11.5 hypothetical protein compare
MMP_RS02190 -1.9 -2.5 sulfopyruvate decarboxylase subunit alpha compare
MMP_RS05295 -1.9 -9.3 minichromosome maintenance protein MCM compare
MMP_RS01720 -1.8 -1.5 replication factor C large subunit compare
MMP_RS08330 -1.8 -6.6 NADH-quinone oxidoreductase subunit H compare
MMP_RS04620 -1.8 -10.7 cobalt transporter CbiM compare
MMP_RS00120 -1.8 -6.0 LysR family transcriptional regulator compare
MMP_RS07130 -1.8 -8.0 coenzyme F420 hydrogenase subunit gamma compare
MMP_RS00240 -1.8 -13.1 type II secretion system F family protein compare
MMP_RS00245 -1.8 -15.3 type II secretion system F family protein compare
MMP_RS00515 -1.8 -1.1 DUF655 domain-containing protein compare
MMP_RS00250 -1.8 -13.7 Flp pilus assembly complex ATPase component TadA compare
MMP_RS01270 -1.8 -14.3 prepilin peptidase compare
MMP_RS06940 -1.8 -3.1 polyprenyl diphosphate synthase compare
MMP_RS05450 -1.8 -4.3 CoB--CoM heterodisulfide reductase subunit C compare
MMP_RS08620 -1.8 -6.5 flagellar accessory protein FlaH compare
MMP_RS07735 -1.8 -0.8 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha compare
MMP_RS06130 -1.8 -4.1 peptidylprolyl isomerase compare


Specific Phenotypes

For 6 genes in this experiment