Experiment set9IT039 for Methanococcus maripaludis S2

Compare to:

H2 McCas with 40 minute oxygen exposure

200 most detrimental genes:

  gene name fitness t score description  
MMP_RS08725 +1.7 1.3 Ni/Fe hydrogenase subunit alpha compare
MMP_RS07840 +1.3 4.0 ribonuclease III compare
MMP_RS08310 +1.3 2.8 TMEM165/GDT1 family protein compare
MMP_RS07860 +1.2 0.9 hypothetical protein compare
MMP_RS01570 +1.2 2.0 hypothetical protein compare
MMP_RS08265 +1.1 3.4 rubrerythrin compare
MMP_RS06910 +1.1 4.6 RlmF-related methyltransferase compare
MMP_RS08430 +1.0 4.6 HAD family hydrolase compare
MMP_RS05675 +1.0 2.2 phosphate ABC transporter ATP-binding protein PstB compare
MMP_RS08835 +1.0 5.9 H(2)-dependent methylenetetrahydromethanopterin dehydrogenase-related protein compare
MMP_RS07915 +1.0 3.5 DUF4870 domain-containing protein compare
MMP_RS00395 +1.0 1.8 MGMT family protein compare
MMP_RS07765 +1.0 3.7 sodium:alanine symporter family protein compare
MMP_RS07890 +1.0 2.4 OB-fold nucleic acid binding domain-containing protein compare
MMP_RS00655 +1.0 3.0 hypothetical protein compare
MMP_RS08480 +0.9 5.2 molybdate ABC transporter substrate-binding protein compare
MMP_RS08775 +0.9 3.1 methanogenesis marker 9 domain-containing protein compare
MMP_RS08390 +0.9 4.3 DUF5400 domain-containing protein compare
MMP_RS06325 +0.9 1.5 hypothetical protein compare
MMP_RS07100 +0.9 4.1 hypothetical protein compare
MMP_RS07095 +0.9 2.4 PspC domain-containing protein compare
MMP_RS06870 +0.9 3.9 DedA family protein compare
MMP_RS07925 +0.9 2.8 haloacid dehalogenase compare
MMP_RS06305 +0.9 5.3 transporter substrate-binding domain-containing protein compare
MMP_RS06300 +0.9 3.5 ABC transporter substrate-binding protein compare
MMP_RS08700 +0.9 5.0 hypothetical protein compare
MMP_RS08575 +0.9 5.9 hypothetical protein compare
MMP_RS08235 +0.9 3.6 hypothetical protein compare
MMP_RS08325 +0.9 4.8 hypothetical protein compare
MMP_RS08455 +0.8 3.9 multiprotein bridging factor aMBF1 compare
MMP_RS00290 +0.8 4.1 hypothetical protein compare
MMP_RS08640 +0.8 5.6 TIM barrel protein compare
MMP_RS08245 +0.8 3.4 DUF4013 domain-containing protein compare
MMP_RS06540 +0.8 2.1 3-methyl-2-oxobutanoate dehydrogenase subunit VorB compare
MMP_RS06335 +0.8 2.5 HAD family hydrolase compare
MMP_RS01650 +0.8 0.8 sulfurtransferase TusA family protein compare
MMP_RS00125 +0.8 1.3 DUF2798 domain-containing protein compare
MMP_RS08205 +0.8 4.1 stage II sporulation protein M compare
MMP_RS06905 +0.8 1.2 hypothetical protein compare
MMP_RS08555 +0.8 1.7 hypothetical protein compare
MMP_RS08380 +0.8 3.4 phosphatase PAP2 family protein compare
MMP_RS08840 +0.8 3.3 class I SAM-dependent methyltransferase compare
MMP_RS01055 +0.8 1.9 hypothetical protein compare
MMP_RS02965 +0.8 2.4 carboxymuconolactone decarboxylase family protein compare
MMP_RS09065 +0.7 4.5 hypothetical protein compare
MMP_RS07885 +0.7 2.6 tripartite tricarboxylate transporter permease compare
MMP_RS06745 +0.7 1.7 DUF2119 domain-containing protein compare
MMP_RS07895 +0.7 2.3 cytochrome c compare
MMP_RS08755 +0.7 4.9 sodium:solute symporter family protein compare
MMP_RS01630 +0.7 4.7 N-glycosylase/DNA lyase compare
MMP_RS04945 +0.7 3.5 hypothetical protein compare
MMP_RS08160 +0.7 2.3 EamA family transporter compare
MMP_RS02045 +0.7 1.2 tRNA-Met compare
MMP_RS08705 +0.7 2.7 sulfopyruvate decarboxylase subunit beta compare
MMP_RS00945 +0.7 1.0 PadR family transcriptional regulator compare
MMP_RS07850 +0.7 2.3 prephenate dehydratase compare
MMP_RS08130 +0.7 3.4 IGHMBP2 family helicase compare
MMP_RS08410 +0.7 2.2 DUF169 domain-containing protein compare
MMP_RS06440 +0.7 3.6 CBS domain-containing protein compare
MMP_RS03715 +0.7 3.5 class III signal peptide-containing protein compare
MMP_RS09060 +0.7 4.6 hypothetical protein compare
MMP_RS06190 +0.7 4.6 tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO compare
MMP_RS00705 +0.7 1.1 hypothetical protein compare
MMP_RS03490 +0.7 1.2 DUF2115 domain-containing protein compare
MMP_RS07985 +0.7 3.9 nitroreductase family protein compare
MMP_RS00990 +0.7 1.7 hypothetical protein compare
MMP_RS07150 +0.7 2.8 MTH895/ArsE family thioredoxin-like protein compare
MMP_RS07910 +0.7 2.3 NAD(P)H-hydrate dehydratase compare
MMP_RS07650 +0.7 4.0 TldD/PmbA family protein compare
MMP_RS06375 +0.7 1.8 ATP-dependent sacrificial sulfur transferase LarE compare
MMP_RS08470 +0.7 2.2 ATP-binding cassette domain-containing protein compare
MMP_RS00155 +0.6 3.5 heavy metal-binding domain-containing protein compare
MMP_RS08090 +0.6 2.9 hypothetical protein compare
MMP_RS02415 +0.6 1.1 site-specific integrase compare
MMP_RS00295 +0.6 1.3 gamma carbonic anhydrase family protein compare
MMP_RS06500 +0.6 3.7 ATP-binding protein compare
MMP_RS01675 +0.6 1.1 hypothetical protein compare
MMP_RS05140 +0.6 1.3 helix-turn-helix transcriptional regulator compare
MMP_RS06520 +0.6 2.8 DUF1786 domain-containing protein compare
MMP_RS07805 +0.6 2.2 ABC transporter permease compare
MMP_RS00430 +0.6 2.4 hypothetical protein compare
MMP_RS06480 +0.6 1.8 ABC transporter substrate-binding protein compare
MMP_RS07835 +0.6 2.3 TldD/PmbA family protein compare
MMP_RS08485 +0.6 3.2 tungstate ABC transporter substrate-binding protein WtpA compare
MMP_RS08415 +0.6 1.8 radical SAM protein compare
MMP_RS00565 +0.6 3.8 CBS domain-containing protein compare
MMP_RS02675 +0.6 1.4 hypothetical protein compare
MMP_RS01455 +0.6 2.3 nickel pincer cofactor biosynthesis protein LarC compare
MMP_RS02300 +0.6 2.6 NAD(P)H-dependent oxidoreductase compare
MMP_RS09025 +0.6 0.8 hypothetical protein compare
MMP_RS06735 +0.6 1.5 class I SAM-dependent rRNA methyltransferase compare
MMP_RS06585 +0.6 1.1 DMT family protein compare
MMP_RS08490 +0.6 3.7 hypothetical protein compare
MMP_RS08260 +0.6 3.0 DUF99 family protein compare
MMP_RS03220 +0.6 1.7 RNA 2' 3'-cyclic phosphodiesterase compare
MMP_RS01475 +0.6 3.7 phosphosulfolactate synthase compare
MMP_RS07155 +0.6 2.2 MFS transporter compare
MMP_RS05940 +0.6 2.7 corrinoid protein compare
MMP_RS05835 +0.6 0.5 secondary thiamine-phosphate synthase enzyme YjbQ compare
MMP_RS03215 +0.6 3.7 MBL fold metallo-hydrolase compare
MMP_RS07590 +0.6 3.2 hypothetical protein compare
MMP_RS01095 +0.6 2.5 iron ABC transporter permease compare
MMP_RS05945 +0.6 2.3 CBS domain-containing protein compare
MMP_RS08315 +0.6 1.6 S-methyl-5-thioribose-1-phosphate isomerase compare
MMP_RS00800 +0.6 3.6 Coenzyme F420 hydrogenase/dehydrogenase beta subunit C-terminal domain compare
MMP_RS01155 +0.6 3.2 XRE family transcriptional regulator compare
MMP_RS09050 +0.6 2.4 CAP domain-containing protein compare
MMP_RS08085 +0.6 4.1 hypothetical protein compare
MMP_RS07770 +0.6 2.0 alanine racemase compare
MMP_RS04050 +0.6 2.4 hypothetical protein compare
MMP_RS09030 +0.6 2.7 hypothetical protein compare
MMP_RS07815 +0.6 0.7 DUF2120 domain-containing protein compare
MMP_RS08770 +0.6 1.8 hypothetical protein compare
MMP_RS08475 +0.6 2.3 ABC transporter permease compare
MMP_RS08215 +0.6 1.9 DUF483 domain-containing protein compare
MMP_RS08500 +0.6 1.6 pyridoxal 5'-phosphate synthase glutaminase subunit PdxT compare
MMP_RS06460 +0.5 1.8 pyrimidine dimer DNA glycosylase/endonuclease V compare
MMP_RS06570 +0.5 1.4 DUF190 domain-containing protein compare
MMP_RS07145 +0.5 2.8 AmmeMemoRadiSam system protein B compare
MMP_RS01860 +0.5 1.7 hypothetical protein compare
MMP_RS03340 +0.5 0.5 ABC transporter ATP-binding protein compare
MMP_RS00400 +0.5 2.3 tributyrin esterase compare
MMP_RS06250 +0.5 2.2 hypothetical protein compare
MMP_RS01965 +0.5 2.1 DUF1616 domain-containing protein compare
MMP_RS08395 +0.5 1.5 DsrE family protein compare
MMP_RS06075 +0.5 2.6 class I SAM-dependent methyltransferase compare
MMP_RS01150 +0.5 2.0 aldo/keto reductase compare
MMP_RS00980 +0.5 2.6 hypothetical protein compare
MMP_RS07855 +0.5 2.1 class I SAM-dependent methyltransferase compare
MMP_RS06495 +0.5 1.8 YkgJ family cysteine cluster protein compare
MMP_RS02390 +0.5 2.3 NifB/NifX family molybdenum-iron cluster-binding protein compare
MMP_RS07345 +0.5 1.6 glycine synthesis protein GlyXL (from data) compare
MMP_RS02720 +0.5 1.4 molybdate ABC transporter substrate-binding protein compare
MMP_RS06590 +0.5 1.2 GNAT family N-acetyltransferase compare
MMP_RS00630 +0.5 2.7 ECF transporter S component compare
MMP_RS08250 +0.5 2.1 pyruvate kinase compare
MMP_RS00335 +0.5 2.6 5-amino-6-(D-ribitylamino)uracil--L-tyrosine 4-hydroxyphenyl transferase CofH compare
MMP_RS06165 +0.5 2.7 ABC transporter permease compare
MMP_RS08080 +0.5 2.1 YchF/TatD family DNA exonuclease compare
MMP_RS03740 +0.5 2.2 indolepyruvate oxidoreductase subunit beta compare
MMP_RS02110 +0.5 1.0 hypothetical protein compare
MMP_RS03840 +0.5 2.1 hypothetical protein compare
MMP_RS01060 +0.5 2.8 calcium/sodium antiporter compare
MMP_RS00700 +0.5 2.8 OB-fold nucleic acid binding domain-containing protein compare
MMP_RS05660 +0.5 2.8 phosphate ABC transporter substrate-binding protein compare
MMP_RS01525 +0.5 1.0 nucleoside-diphosphate kinase compare
MMP_RS00450 +0.5 1.1 4Fe-4S binding protein compare
MMP_RS01580 +0.5 2.0 PQQ-binding-like beta-propeller repeat protein compare
MMP_RS06320 +0.5 1.5 hypothetical protein compare
MMP_RS03890 +0.5 2.5 DUF2540 domain-containing protein compare
MMP_RS06150 +0.5 3.4 hypothetical protein compare
MMP_RS07620 +0.5 1.7 energy-coupling factor ABC transporter substrate-binding protein compare
MMP_RS04205 +0.5 1.7 carboxymuconolactone decarboxylase family protein compare
MMP_RS03520 +0.5 0.7 YwbE family protein compare
MMP_RS08285 +0.5 2.3 serine/threonine protein kinase compare
MMP_RS00660 +0.5 2.5 alkaline phosphatase family protein compare
MMP_RS01775 +0.5 0.9 TIGR00297 family protein compare
MMP_RS01130 +0.5 3.3 flavoprotein compare
MMP_RS01010 +0.5 1.7 DUF4352 domain-containing protein compare
MMP_RS09035 +0.5 1.6 hypothetical protein compare
MMP_RS02590 +0.5 2.2 low molecular weight phosphatase family protein compare
MMP_RS01090 +0.4 2.2 ABC transporter substrate-binding protein compare
MMP_RS08155 +0.4 1.6 hypothetical protein compare
MMP_RS06575 +0.4 1.4 fluoride efflux transporter CrcB compare
MMP_RS02725 +0.4 2.3 molybdate ABC transporter permease subunit compare
MMP_RS07905 +0.4 1.3 DUF3343 domain-containing protein compare
MMP_RS01645 +0.4 1.7 SWIM zinc finger family protein compare
MMP_RS02815 +0.4 1.3 hypothetical protein compare
MMP_RS01120 +0.4 1.7 permease compare
MMP_RS06045 +0.4 2.3 DNA polymerase compare
MMP_RS08980 +0.4 1.0 hypothetical protein compare
MMP_RS04100 +0.4 1.2 hypothetical protein compare
MMP_RS04805 +0.4 2.9 chemotaxis response regulator protein-glutamate methylesterase compare
MMP_RS01805 +0.4 1.5 NUDIX hydrolase compare
MMP_RS01685 +0.4 1.2 indolepyruvate oxidoreductase subunit beta compare
MMP_RS06550 +0.4 1.7 AMP-binding protein compare
MMP_RS04035 +0.4 0.9 hypothetical protein compare
MMP_RS00545 +0.4 1.3 XRE family transcriptional regulator compare
MMP_RS08405 +0.4 1.7 MFS transporter compare
MMP_RS06005 +0.4 1.5 heavy-metal-associated domain-containing protein compare
MMP_RS03785 +0.4 1.6 cupin domain-containing protein compare
MMP_RS01320 +0.4 0.9 hypothetical protein compare
MMP_RS02375 +0.4 2.4 hypothetical protein compare
MMP_RS04190 +0.4 1.8 hypothetical protein compare
MMP_RS03800 +0.4 1.5 hypothetical protein compare
MMP_RS06965 +0.4 2.0 TIGR04014 family B12-binding domain/radical SAM domain-containing protein compare
MMP_RS07675 +0.4 3.0 S-layer protein compare
MMP_RS02825 +0.4 2.3 mechanosensitive ion channel family protein compare
MMP_RS00105 +0.4 2.0 hypothetical protein compare
MMP_RS06875 +0.4 1.5 FAD-dependent oxidoreductase compare
MMP_RS06065 +0.4 2.8 iron ABC transporter substrate-binding protein compare
MMP_RS08240 +0.4 1.8 methanogenesis marker 16 metalloprotein compare
MMP_RS00960 +0.4 1.1 iron export ABC transporter permease subunit FetB compare
MMP_RS01100 +0.4 0.5 ABC transporter ATP-binding protein compare
MMP_RS08945 +0.4 2.6 hypothetical protein compare
MMP_RS06560 +0.4 1.9 hypothetical protein compare
MMP_RS06155 +0.4 1.2 DUF4186 domain-containing protein compare
MMP_RS00195 +0.4 3.1 DUF4013 domain-containing protein compare
MMP_RS07595 +0.4 2.0 hypothetical protein compare
MMP_RS06545 +0.4 1.7 ferredoxin family protein compare


Specific Phenotypes

For 6 genes in this experiment