Experiment set9IT039 for Klebsiella michiganensis M5al

Compare to:

LB in EcoFAB_3.5mL

200 most important genes:

  gene name fitness t score description  
BWI76_RS23240 -4.4 -3.0 exonuclease V subunit gamma compare
BWI76_RS21140 -3.8 -3.4 molecular chaperone HscA compare
BWI76_RS04510 -3.3 -2.6 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) compare
BWI76_RS23230 -3.1 -3.6 exodeoxyribonuclease V subunit beta compare
BWI76_RS08525 -2.7 -2.7 colicin transporter compare
BWI76_RS09660 -2.6 -1.8 DNA translocase FtsK compare
BWI76_RS01200 -2.6 -2.2 diaminopimelate epimerase compare
BWI76_RS09645 -2.4 -1.3 thioredoxin-disulfide reductase compare
BWI76_RS09730 -2.3 -1.7 pyruvate formate lyase 1-activating protein compare
BWI76_RS26075 -2.2 -3.1 DNA adenine methylase compare
BWI76_RS01325 -2.2 -2.6 twin-arginine translocase subunit TatB compare
BWI76_RS01210 -2.1 -1.8 tyrosine recombinase XerC compare
BWI76_RS25480 -2.0 -3.6 ribonuclease E/G compare
BWI76_RS20360 -1.9 -1.0 cell division protein DedD compare
BWI76_RS00140 -1.9 -1.1 phosphate transport system regulator PhoU compare
BWI76_RS00355 -1.8 -2.7 DNA polymerase I compare
BWI76_RS11700 -1.8 -1.2 hypothetical protein compare
BWI76_RS08405 -1.8 -2.4 succinate dehydrogenase flavoprotein subunit compare
BWI76_RS04715 -1.7 -1.6 division/cell wall cluster transcriptional repressor MraZ compare
BWI76_RS00760 -1.7 -3.1 cell division protein FtsN compare
BWI76_RS27430 -1.7 -1.1 (p)ppGpp synthetase compare
BWI76_RS10745 -1.7 -1.0 hypothetical protein compare
BWI76_RS01800 -1.7 -3.3 glucose-6-phosphate isomerase compare
BWI76_RS12485 -1.6 -3.8 TyrR family transcriptional regulator compare
BWI76_RS23265 -1.6 -2.2 hypothetical protein compare
BWI76_RS17720 -1.6 -0.8 muramoyltetrapeptide carboxypeptidase compare
BWI76_RS05015 -1.6 -2.9 transcriptional regulator compare
BWI76_RS19840 -1.6 -1.1 hypothetical protein compare
BWI76_RS23495 -1.6 -7.5 hypothetical protein compare
BWI76_RS09190 -1.5 -2.5 hypothetical protein compare
BWI76_RS22205 -1.4 -2.7 cation ABC transporter ATP-binding protein compare
BWI76_RS00875 -1.4 -4.7 DNA-binding transcriptional regulator FabR compare
BWI76_RS26085 -1.4 -1.2 3-dehydroquinate synthase compare
BWI76_RS21490 -1.4 -9.5 GGDEF domain-containing protein compare
BWI76_RS24055 -1.4 -3.4 MFS transporter compare
BWI76_RS09615 -1.4 -1.6 ATP-dependent Clp protease ATP-binding subunit ClpA compare
BWI76_RS06120 -1.4 -2.1 membrane protein compare
BWI76_RS19480 -1.4 -2.2 transcriptional regulator compare
BWI76_RS04050 -1.4 -2.9 hydroxamate siderophore iron reductase FhuF compare
BWI76_RS23490 -1.3 -6.7 fimbrial protein compare
BWI76_RS00720 -1.3 -2.3 DNA-binding response regulator compare
BWI76_RS17935 -1.3 -2.1 DUF2627 domain-containing protein compare
BWI76_RS17045 -1.3 -1.2 hypothetical protein compare
BWI76_RS04645 -1.2 -5.2 3-dehydroquinase compare
BWI76_RS03080 -1.2 -3.2 (Fe-S)-cluster assembly protein compare
BWI76_RS23500 -1.2 -8.9 hypothetical protein compare
BWI76_RS13160 -1.2 -1.5 azoreductase compare
BWI76_RS00240 -1.2 -1.5 FMN-binding protein MioC compare
BWI76_RS21485 -1.2 -5.6 DUF4154 domain-containing protein compare
BWI76_RS08275 -1.2 -1.1 LexA regulated protein compare
BWI76_RS23505 -1.2 -8.8 ferrous iron transporter B compare
BWI76_RS21980 -1.2 -2.9 hypothetical protein compare
BWI76_RS06535 -1.2 -3.0 endopeptidase La compare
BWI76_RS08530 -1.2 -1.2 protein TolA compare
BWI76_RS02410 -1.2 -1.5 EF-P beta-lysylation protein EpmB compare
BWI76_RS12170 -1.1 -1.8 hypothetical protein compare
BWI76_RS21450 -1.1 -1.3 23S rRNA pseudouridine(1911/1915/1917) synthase compare
BWI76_RS23470 -1.1 -7.1 hypothetical protein compare
BWI76_RS00865 -1.1 -4.4 DNA-binding transcriptional regulator OxyR compare
BWI76_RS25205 -1.1 -1.9 hypothetical protein compare
BWI76_RS08515 -1.1 -1.5 acyl-CoA thioesterase YbgC compare
BWI76_RS15115 -1.1 -3.9 MFS transporter compare
BWI76_RS26665 -1.1 -1.7 DNA-binding response regulator compare
BWI76_RS04770 -1.1 -2.0 D-alanine--D-alanine ligase compare
BWI76_RS20375 -1.1 -1.5 membrane protein compare
BWI76_RS05200 -1.1 -1.6 bifunctional uridylyltransferase/uridylyl-removing protein compare
BWI76_RS15835 -1.1 -1.1 hypothetical protein compare
BWI76_RS05640 -1.1 -2.1 GntR family transcriptional regulator compare
BWI76_RS16260 -1.0 -1.3 two-component sensor histidine kinase compare
BWI76_RS08615 -1.0 -2.6 galactokinase compare
BWI76_RS17375 -1.0 -1.3 nitrate ABC transporter, permease protein compare
BWI76_RS26590 -1.0 -2.0 transcriptional regulator compare
BWI76_RS03045 -1.0 -1.0 hypothetical protein compare
BWI76_RS27165 -1.0 -2.9 mannitol-1-phosphate 5-dehydrogenase compare
BWI76_RS18675 -1.0 -1.3 fimbrial protein compare
BWI76_RS24910 -1.0 -4.0 rRNA (cytidine-2'-O-)-methyltransferase compare
BWI76_RS27820 -1.0 -0.9 ilvB operon leader peptide IvbL compare
BWI76_RS07675 -1.0 -3.7 DeoR family transcriptional regulator compare
BWI76_RS12670 -1.0 -1.2 DNA polymerase V subunit UmuD compare
BWI76_RS26455 -1.0 -2.3 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase compare
BWI76_RS17350 -1.0 -1.6 DNA-binding response regulator compare
BWI76_RS01220 -1.0 -3.6 DNA-dependent helicase II compare
BWI76_RS23705 -1.0 -2.4 2-deoxy-D-ribonyl-CoA 3-dehydrogenase (from data) compare
BWI76_RS19585 -1.0 -1.1 gentisate 1,2-dioxygenase compare
BWI76_RS10255 -1.0 -1.9 dihydrodipicolinate synthase family protein compare
BWI76_RS01330 -1.0 -1.4 twin-arginine translocase subunit TatC compare
BWI76_RS27440 -1.0 -2.1 DNA helicase RecG compare
BWI76_RS02610 -0.9 -2.6 transcriptional regulator compare
BWI76_RS00715 -0.9 -1.4 two-component sensor histidine kinase compare
BWI76_RS14435 -0.9 -1.1 glutamine ABC transporter ATP-binding protein compare
BWI76_RS16335 -0.9 -1.0 division septum protein Blr compare
BWI76_RS09860 -0.9 -2.1 hypothetical protein compare
BWI76_RS23215 -0.9 -2.1 N-acetylmuramoyl-L-alanine amidase compare
BWI76_RS11020 -0.9 -2.7 oxidoreductase family, NAD-binding protein compare
BWI76_RS25870 -0.9 -1.1 elongation factor Tu compare
BWI76_RS09760 -0.9 -3.2 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS14415 -0.9 -1.4 transcriptional regulator, TetR family protein compare
BWI76_RS11805 -0.9 -3.0 hypothetical protein compare
BWI76_RS15950 -0.9 -1.1 dethiobiotin synthase compare
BWI76_RS23830 -0.9 -2.8 hypothetical protein compare
BWI76_RS18335 -0.9 -4.5 DNA-binding response regulator compare
BWI76_RS20150 -0.9 -1.5 NADH:ubiquinone oxidoreductase subunit J compare
BWI76_RS01185 -0.9 -0.9 adenylate cyclase compare
BWI76_RS05120 -0.9 -5.0 bifunctional glycosyl transferase/transpeptidase compare
BWI76_RS16800 -0.9 -1.4 amino acid ABC transporter permease compare
BWI76_RS24900 -0.9 -1.0 DeoR family transcriptional regulator compare
BWI76_RS01775 -0.9 -0.6 hypothetical protein compare
BWI76_RS08825 -0.9 -1.9 cyclic pyranopterin monophosphate synthase MoaC compare
BWI76_RS06325 -0.9 -2.1 hypothetical protein compare
BWI76_RS22950 -0.9 -1.2 membrane protein compare
BWI76_RS06830 -0.9 -2.2 recombination protein RecR compare
BWI76_RS27280 -0.9 -3.1 polymerase compare
BWI76_RS07500 -0.9 -2.9 RND transporter MFP subunit compare
BWI76_RS07475 -0.9 -0.7 DNA-binding transcriptional regulator RamA compare
BWI76_RS19935 -0.9 -0.9 hypothetical protein compare
BWI76_RS11235 -0.9 -0.8 hypothetical protein compare
BWI76_RS26440 -0.9 -0.9 hypothetical protein compare
BWI76_RS22365 -0.9 -2.1 hydrogenase expression/formation protein HypE compare
BWI76_RS20880 -0.9 -1.2 esterase compare
BWI76_RS08040 -0.9 -1.5 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH compare
BWI76_RS17770 -0.9 -1.1 isomerase/hydrolase compare
BWI76_RS26755 -0.9 -3.8 peptidase M16 compare
BWI76_RS26460 -0.9 -1.6 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
BWI76_RS17615 -0.8 -1.2 RNA pseudouridine synthase compare
BWI76_RS24925 -0.8 -1.1 DnaA initiator-associating protein DiaA compare
BWI76_RS12665 -0.8 -1.3 hypothetical protein compare
BWI76_RS04625 -0.8 -1.8 glucose uptake inhibitor SgrT compare
BWI76_RS03825 -0.8 -1.9 4-hydroxyphenylacetate 3-monooxygenase compare
BWI76_RS12825 -0.8 -1.3 hypothetical protein compare
BWI76_RS10500 -0.8 -1.3 flavoprotein monooxygenase compare
BWI76_RS16755 -0.8 -1.6 acetoin reductase compare
BWI76_RS09640 -0.8 -1.6 cysteine/glutathione ABC transporter permease/ATP-binding protein CydD compare
BWI76_RS21505 -0.8 -0.8 hypothetical protein compare
BWI76_RS23655 -0.8 -2.5 DeoR family transcriptional regulator compare
BWI76_RS08425 -0.8 -2.2 succinyl-CoA ligase subunit beta compare
BWI76_RS21100 -0.8 -1.8 nucleoside-diphosphate kinase compare
BWI76_RS24955 -0.8 -1.3 hypothetical protein compare
BWI76_RS09315 -0.8 -1.2 hypothetical protein compare
BWI76_RS22265 -0.8 -2.4 NADH:flavorubredoxin oxidoreductase compare
BWI76_RS23120 -0.8 -1.6 propanediol dehydratase medium subunit compare
BWI76_RS22975 -0.8 -2.0 tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA compare
BWI76_RS05790 -0.8 -0.9 phage DNA-binding protein compare
BWI76_RS12070 -0.8 -0.7 hypothetical protein compare
BWI76_RS13770 -0.8 -2.4 alkylhydroperoxidase domain protein compare
BWI76_RS24575 -0.8 -0.9 hypothetical protein compare
BWI76_RS18915 -0.8 -2.0 NAD(P)-dependent oxidoreductase compare
BWI76_RS15225 -0.8 -2.7 DeoR family transcriptional regulator compare
BWI76_RS18770 -0.8 -0.7 DNA gyrase inhibitor compare
BWI76_RS08390 -0.8 -0.9 hypothetical protein compare
BWI76_RS13730 -0.8 -0.8 hypothetical protein compare
BWI76_RS24315 -0.8 -3.4 cell division protein FtsP compare
BWI76_RS22280 -0.8 -2.7 formate dehydrogenase-H ferredoxin subunit compare
BWI76_RS18755 -0.8 -0.7 adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase compare
BWI76_RS24920 -0.8 -1.5 YraN family protein compare
BWI76_RS21245 -0.8 -1.4 nitrogen regulatory protein P-II compare
BWI76_RS17955 -0.8 -1.5 hypothetical protein compare
BWI76_RS12420 -0.8 -0.6 peptide ABC transporter substrate-binding protein SapA compare
BWI76_RS15845 -0.8 -0.6 hypothetical protein compare
BWI76_RS16485 -0.8 -0.9 ribonuclease T compare
BWI76_RS04055 -0.8 -6.0 GGDEF domain-containing protein compare
BWI76_RS19610 -0.8 -2.2 Cytidine deaminase (EC 3.5.4.5) (from data) compare
BWI76_RS10585 -0.8 -1.6 amino acid ABC transporter ATP-binding protein compare
BWI76_RS20160 -0.8 -1.4 NADH-quinone oxidoreductase subunit H compare
BWI76_RS13895 -0.7 -1.6 LysR family transcriptional regulator compare
BWI76_RS27200 -0.7 -2.1 tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL compare
BWI76_RS15035 -0.7 -1.0 metal ABC transporter permease compare
BWI76_RS08380 -0.7 -0.7 endonuclease VIII compare
BWI76_RS16395 -0.7 -1.8 glutathione S-transferase compare
BWI76_RS08520 -0.7 -1.2 colicin transporter TolQ compare
BWI76_RS00180 -0.7 -1.2 F0F1 ATP synthase subunit epsilon compare
BWI76_RS05450 -0.7 -0.6 ribonuclease HI compare
BWI76_RS23305 -0.7 -1.2 NADP(H)-dependent aldo-keto reductase compare
BWI76_RS19770 -0.7 -0.8 bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase compare
BWI76_RS14000 -0.7 -1.6 glutamine amidotransferase compare
BWI76_RS23810 -0.7 -1.5 bifunctional protein-disulfide isomerase/oxidoreductase DsbC compare
BWI76_RS27310 -0.7 -1.4 glycosyltransferase compare
BWI76_RS26015 -0.7 -1.3 DUF2559 domain-containing protein compare
BWI76_RS27505 -0.7 -1.8 septal ring assembly protein ZapB compare
BWI76_RS01795 -0.7 -1.8 hypothetical protein compare
BWI76_RS22650 -0.7 -2.2 lipoprotein NlpD compare
BWI76_RS20225 -0.7 -2.1 hypothetical protein compare
BWI76_RS03920 -0.7 -1.2 N-acetyltransferase compare
BWI76_RS22350 -0.7 -2.4 hydrogenase nickel incorporation protein HypB compare
BWI76_RS08725 -0.7 -2.8 Formiminoglutamase (EC 3.5.3.8) (from data) compare
BWI76_RS20355 -0.7 -1.5 colicin V production protein compare
BWI76_RS03515 -0.7 -1.3 hypothetical protein compare
BWI76_RS23575 -0.7 -3.1 hypothetical protein compare
BWI76_RS16870 -0.7 -1.7 LysR family transcriptional regulator compare
BWI76_RS24960 -0.7 -2.3 N-acetyltransferase compare
BWI76_RS14615 -0.7 -0.7 hypothetical protein compare
BWI76_RS01165 -0.7 -2.7 protoheme IX biogenesis protein HemY compare
BWI76_RS04710 -0.7 -1.5 hypothetical protein compare
BWI76_RS18125 -0.7 -0.8 murein DD-endopeptidase MepM compare
BWI76_RS14540 -0.7 -1.6 yersiniabactin biosynthetic protein YbtU compare
BWI76_RS12910 -0.7 -1.4 3,4-dihydroxyphenylacetate 2,3-dioxygenase compare
BWI76_RS07965 -0.7 -2.5 anaerobic C4-dicarboxylate transporter DcuC compare
BWI76_RS00065 -0.7 -2.9 MurR/RpiR family transcriptional regulator compare
BWI76_RS26890 -0.7 -0.7 hypothetical protein compare
BWI76_RS09755 -0.7 -2.4 phosphoserine transaminase compare
BWI76_RS25285 -0.7 -0.6 HPr family phosphocarrier protein compare


Specific Phenotypes

For 4 genes in this experiment