Experiment set9IT038 for Pseudomonas syringae pv. syringae B728a

Compare to:

KB with Helenine 10 mM

200 most important genes:

  gene name fitness t score description  
Psyr_1544 -3.5 -6.6 SirA-like protein compare
Psyr_0033 -3.5 -2.4 tryptophan synthase, alpha chain compare
Psyr_4740 -3.4 -9.4 thiazole-phosphate synthase compare
Psyr_4341 -3.2 -10.1 thiamine-phosphate diphosphorylase compare
Psyr_4687 -3.1 -11.4 biotin synthase compare
Psyr_4340 -2.8 -11.0 phosphomethylpyrimidine kinase, putative compare
Psyr_4684 -2.7 -5.0 biotin synthesis protein BioC compare
Psyr_0487 -2.5 -3.3 glutathione synthase compare
Psyr_0034 -2.5 -4.7 tryptophan synthase, beta chain compare
Psyr_3193 -2.3 -4.5 Transcription factor jumonji, jmjC compare
Psyr_0951 -2.2 -3.5 UBA/THIF-type NAD/FAD binding fold:MoeZ/MoeB compare
Psyr_0454 -2.2 -7.6 adenosylmethionine-8-amino-7-oxononanoate aminotransferase apoenzyme compare
Psyr_4686 -2.2 -7.7 8-amino-7-oxononanoate synthase compare
Psyr_3419 -2.2 -5.8 4Fe-4S ferredoxin, iron-sulfur binding protein compare
Psyr_4091 -2.1 -4.9 8-oxo-dGTPase compare
Psyr_4683 -2.0 -5.7 dethiobiotin synthase compare
Psyr_1613 -2.0 -5.8 septum site-determining protein MinC compare
Psyr_2980 -2.0 -4.6 UDP-glucose pyrophosphorylase compare
Psyr_4015 -1.9 -4.0 conserved domain protein compare
Psyr_0835 -1.7 -6.5 transcriptional regulator, TraR/DksA family compare
Psyr_4519 -1.5 -6.0 General substrate transporter:Major facilitator superfamily compare
Psyr_0475 -1.5 -3.7 Protein of unknown function YGGT compare
Psyr_1373 -1.5 -3.2 Peptidoglycan-binding LysM:Peptidase M23B compare
Psyr_5135 -1.5 -0.8 Protein of unknown function DUF37 compare
Psyr_4991 -1.4 -2.1 hypothetical protein compare
Psyr_2180 -1.4 -4.1 transcriptional regulator, LysR family compare
Psyr_0571 -1.4 -3.7 tRNA isopentenyltransferase compare
Psyr_1688 -1.4 -2.9 Protein of unknown function DUF1315 compare
Psyr_0255 -1.3 -2.7 glutamate-cysteine ligase compare
Psyr_4582 -1.3 -1.6 hypothetical protein compare
Psyr_3675 -1.3 -3.4 adenosylcobinamide kinase compare
Psyr_2897 -1.3 -4.8 regulatory protein, LuxR:Response regulator receiver compare
Psyr_1410 -1.3 -3.6 Holliday junction DNA helicase RuvB compare
Psyr_4580 -1.3 -3.8 anthranilate phosphoribosyltransferase compare
Psyr_4203 -1.3 -2.0 SsrA-binding protein compare
Psyr_3208 -1.3 -2.3 NADH dehydrogenase subunit M compare
Psyr_1419 -1.2 -3.5 preQ(0) biosynthesis protein QueC compare
Psyr_0549 -1.2 -2.2 Metallophosphoesterase compare
Psyr_1747 -1.2 -4.5 ATP-dependent Clp protease proteolytic subunit ClpP compare
Psyr_5132 -1.2 -2.8 Glucose-inhibited division protein A subfamily compare
Psyr_0531 -1.2 -2.5 LmbE-like protein compare
Psyr_2117 -1.2 -2.4 conserved hypothetical protein compare
Psyr_2593 -1.1 -3.1 ABC transporter compare
Psyr_4830 -1.1 -2.2 Binding-protein-dependent transport systems inner membrane component compare
Psyr_3020 -1.1 -2.4 precorrin-4 C11-methyltransferase compare
Psyr_0917 -1.1 -7.2 ABC-2 compare
Psyr_1371 -1.1 -4.5 5'-nucleotidase / exopolyphosphatase / 3'-nucleotidase compare
Psyr_2591 -1.1 -4.8 transport system permease protein compare
Psyr_4138 -1.1 -3.6 Toluene tolerance compare
Psyr_0524 -1.1 -2.4 Lipopolysaccharide kinase compare
Psyr_2266 -1.1 -2.3 Binding-protein-dependent transport systems inner membrane component compare
Psyr_1802 -1.1 -1.2 transcriptional regulator, AsnC family compare
Psyr_2779 -1.1 -2.4 Phage minor tail compare
Psyr_0784 -1.0 -1.6 CheW-like protein compare
Psyr_0393 -1.0 -3.5 Protein of unknown function DUF971 compare
Psyr_1663 -1.0 -3.6 phosphoribosylanthranilate isomerase compare
Psyr_2150 -1.0 -2.4 protein of unknown function DUF903 compare
Psyr_2386 -1.0 -2.3 hypothetical protein compare
Psyr_5133 -1.0 -3.4 tRNA modification GTPase trmE compare
Psyr_0529 -1.0 -2.7 Glycosyl transferase, group 1 compare
Psyr_0916 -1.0 -6.8 GDP-mannose 4,6-dehydratase compare
Psyr_3947 -1.0 -2.6 Methyltransferase, putative compare
Psyr_5072 -1.0 -1.3 Cobalamin synthesis protein/P47K:Cobalamin synthesis protein/P47K compare
Psyr_3597 -1.0 -1.3 ABC transporter compare
Psyr_4622 -1.0 -3.3 Nucleotidyl transferase compare
Psyr_3904 -1.0 -5.1 Major intrinsic protein compare
Psyr_2143 -0.9 -2.1 delta1-piperideine 2-carboxylate reductase compare
Psyr_4158 -0.9 -5.4 conserved hypothetical protein compare
Psyr_0936 -0.9 -6.5 Glycosyl transferase, group 1 compare
Psyr_1910 -0.9 -3.3 VacJ-like lipoprotein compare
Psyr_0793 -0.9 -4.3 conserved hypothetical protein compare
Psyr_0184 -0.9 -2.4 Protein of unknown function DUF484 compare
Psyr_0199 -0.9 -2.9 Glutathione-dependent formaldehyde-activating, GFA compare
Psyr_4151 -0.9 -1.3 Phosphocarrier HPr protein compare
Psyr_1236 -0.9 -2.6 transcriptional regulator, BadM/Rrf2 family compare
Psyr_1357 -0.9 -3.1 RNase HII compare
Psyr_0918 -0.9 -6.7 ABC transporter compare
Psyr_1594 -0.9 -2.6 FKBP-type peptidyl-prolyl isomerase, N-terminal:Peptidylprolyl isomerase, FKBP-type compare
Psyr_2973 -0.9 -1.6 Glyoxalase I compare
Psyr_1408 -0.9 -1.5 Holliday junction endonuclease RuvC compare
Psyr_2808 -0.8 -2.0 hypothetical protein compare
Psyr_3489 -0.8 -2.5 FlgN compare
Psyr_0574 -0.8 -3.2 protease FtsH subunit HflK compare
Psyr_2190 -0.8 -1.7 NADH:flavin oxidoreductase/NADH oxidase compare
Psyr_4566 -0.8 -4.4 Peptidase M23B compare
Psyr_2118 -0.8 -2.0 protein of unknown function DUF883 compare
Psyr_4598 -0.8 -2.3 lipoprotein, putative compare
Psyr_3282 -0.8 -4.1 transcriptional regulator, TetR family compare
Psyr_4362 -0.8 -1.4 Rare lipoprotein A compare
Psyr_4089 -0.8 -3.2 PAS compare
Psyr_2398 -0.8 -2.4 ABC transporter compare
Psyr_1407 -0.8 -3.9 Protein of unknown function DUF28 compare
Psyr_5065 -0.8 -4.4 ATP-dependent DNA helicase UvrD compare
Psyr_1372 -0.8 -3.4 Protein-L-isoaspartate(D-aspartate) O-methyltransferase compare
Psyr_3199 -0.8 -1.7 NADH dehydrogenase subunit D / NADH dehydrogenase subunit C compare
Psyr_0885 -0.8 -1.9 conserved hypothetical protein compare
Psyr_0528 -0.8 -1.9 Carbamoyltransferase compare
Psyr_2392 -0.7 -3.3 conserved hypothetical protein compare
Psyr_3644 -0.7 -2.1 prephenate dehydrogenase compare
Psyr_1418 -0.7 -2.2 Radical SAM compare
Psyr_0849 -0.7 -4.8 CDP-diacylglycerol--serine O-phosphatidyltransferase compare
Psyr_2590 -0.7 -1.7 Periplasmic binding protein compare
Psyr_4139 -0.7 -2.8 Mce4/Rv3499c/MTV023.06c protein compare
Psyr_4418 -0.7 -1.4 Precorrin-6Y C5,15-methyltransferase (decarboxylating) compare
Psyr_1650 -0.7 -2.0 aminodeoxychorismate lyase apoprotein compare
Psyr_0383 -0.7 -0.7 Twin-arginine translocation protein TatB compare
Psyr_5067 -0.7 -2.8 conserved hypothetical protein compare
Psyr_3425 -0.7 -1.6 Cyclic nucleotide-binding:Bacterial regulatory protein, Crp compare
Psyr_2755 -0.7 -2.4 2-nitropropane dioxygenase, NPD compare
Psyr_0575 -0.7 -1.5 protease FtsH subunit HflC compare
Psyr_3837 -0.7 -1.0 conserved hypothetical protein compare
Psyr_3637 -0.7 -5.0 Glycosyl transferase, family 4 compare
Psyr_2092 -0.7 -1.4 Protein of unknown function 1935 compare
Psyr_1487 -0.7 -1.8 conserved hypothetical protein compare
Psyr_3698 -0.7 -2.6 Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal:Hpt compare
Psyr_0350 -0.7 -1.3 ABC transporter compare
Psyr_3521 -0.7 -2.5 transcriptional regulator, LysR family compare
Psyr_4627 -0.7 -1.8 dimethyladenosine transferase compare
Psyr_3852 -0.7 -2.5 lipoprotein SlyB, putative compare
Psyr_1121 -0.7 -1.5 6-phosphogluconolactonase compare
Psyr_0444 -0.7 -0.9 Malonate decarboxylase delta subunit compare
Psyr_4944 -0.7 -3.2 transcriptional regulator, LysR family compare
Psyr_0998 -0.7 -2.5 Isochorismatase hydrolase compare
Psyr_2231 -0.7 -2.6 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase compare
Psyr_2887 -0.7 -1.1 Endoribonuclease L-PSP compare
Psyr_3000 -0.7 -1.1 methyltransferase, putative compare
Psyr_1667 -0.7 -3.0 Colicin V production protein compare
Psyr_2582 -0.7 -3.7 TonB-dependent siderophore receptor compare
Psyr_3805 -0.6 -1.8 hypothetical protein compare
Psyr_0378 -0.6 -4.1 Glycosyl transferase, family 2 compare
Psyr_4512 -0.6 -3.2 putative phage-related protein compare
Psyr_0826 -0.6 -3.1 glucose-6-phosphate isomerase compare
Psyr_3450 -0.6 -1.9 Hpt compare
Psyr_4093 -0.6 -2.4 glutamate N-acetyltransferase compare
Psyr_3665 -0.6 -2.7 conserved hypothetical protein compare
Psyr_1317 -0.6 -1.4 conserved hypothetical protein compare
Psyr_4916 -0.6 -1.8 conserved hypothetical protein compare
Psyr_0914 -0.6 -4.6 Glycosyl transferase, group 1 compare
Psyr_1268 -0.6 -2.7 extracellular solute-binding protein, family 3:SLT compare
Psyr_1118 -0.6 -1.7 Aldose 1-epimerase compare
Psyr_4025 -0.6 -2.3 ATPase compare
Psyr_3636 -0.6 -4.3 Polysaccharide biosynthesis protein CapD compare
Psyr_1765 -0.6 -1.7 GCN5-related N-acetyltransferase compare
Psyr_0831 -0.6 -1.7 Two-component response regulator CbrB compare
Psyr_3676 -0.6 -2.6 adenosylcobyric acid synthase (glutamine-hydrolysing) compare
Psyr_3377 -0.6 -1.2 transcriptional regulator, MarR family compare
Psyr_3986 -0.6 -2.5 GCN5-related N-acetyltransferase compare
Psyr_1930 -0.6 -2.1 hypothetical protein compare
Psyr_3013 -0.6 -1.3 magnesium chelatase subunit ChlD compare
Psyr_3427 -0.6 -1.5 conserved hypothetical protein compare
Psyr_1017 -0.6 -1.6 type III effector HopJ1 compare
Psyr_0579 -0.6 -4.2 RNAse R compare
Psyr_0920 -0.6 -5.2 Glycosyl transferase, group 1 compare
Psyr_3681 -0.6 -1.1 cob(I)yrinic acid a,c-diamide adenosyltransferase compare
Psyr_3028 -0.6 -1.1 Protein of unknown function DUF28 compare
Psyr_3791 -0.6 -1.9 Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal compare
Psyr_3739 -0.6 -1.6 conserved hypothetical protein compare
Psyr_2538 -0.6 -1.3 Binding-protein-dependent transport systems inner membrane component compare
Psyr_0622 -0.6 -1.6 transcriptional regulator, XRE family compare
Psyr_3784 -0.6 -2.4 conserved hypothetical protein compare
Psyr_2592 -0.6 -2.2 transport system permease protein compare
Psyr_1601 -0.6 -2.9 HAD-superfamily hydrolase, subfamily IB (PSPase-like):HAD-superfamily subfamily IB hydrolase, hypothetical 2 compare
Psyr_2202 -0.6 -1.1 ABC transporter compare
Psyr_3162 -0.6 -1.6 Metalloprotease inhibitor/calysin compare
Psyr_3015 -0.6 -3.0 cobaltochelatase CobN subunit compare
Psyr_3354 -0.6 -2.3 Ankyrin compare
Psyr_2088 -0.6 -1.2 2-methylaconitate cis-trans isomerase compare
Psyr_4134 -0.6 -3.4 ATP phosphoribosyltransferase (homohexameric) compare
Psyr_2339 -0.6 -1.4 hypothetical protein compare
Psyr_1234 -0.6 -2.1 RNA methyltransferase TrmH, group 1 compare
Psyr_4908 -0.6 -2.1 conserved hypothetical protein compare
Psyr_3674 -0.6 -1.4 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase compare
Psyr_1964 -0.6 -2.9 Protein of unknown function DUF323 compare
Psyr_4460 -0.6 -1.2 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II compare
Psyr_3695 -0.6 -3.7 RelA/SpoT protein compare
Psyr_1546 -0.6 -1.5 Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen compare
Psyr_0838 -0.6 -1.0 Rieske [2Fe-2S] region compare
Psyr_2256 -0.6 -1.5 ABC transporter compare
Psyr_3755 -0.6 -0.8 conserved hypothetical protein compare
Psyr_4601 -0.6 -1.2 hypothetical protein compare
Psyr_4275 -0.6 -3.3 DNA replication and repair protein RadA compare
Psyr_4945 -0.6 -3.0 Formate dehydrogenase, subunit FdhD compare
Psyr_2265 -0.5 -2.1 Binding-protein-dependent transport systems inner membrane component compare
Psyr_1350 -0.5 -1.7 site-2 protease, Metallo peptidase, MEROPS family M50B compare
Psyr_1540 -0.5 -1.3 hypothetical protein compare
Psyr_3358 -0.5 -1.3 transmembrane pair compare
Psyr_4404 -0.5 -0.7 tRNA-U20-dihydrouridine synthase compare
Psyr_2059 -0.5 -1.0 Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer compare
Psyr_0070 -0.5 -1.2 hypothetical protein compare
Psyr_3384 -0.5 -2.8 lipoprotein, putative compare
Psyr_2211 -0.5 -1.4 monooxygenase, NtaA/SnaA/SoxA family compare
Psyr_2743 -0.5 -2.0 Lysine exporter protein (LYSE/YGGA) compare
Psyr_1140 -0.5 -1.7 Disulfide bond formation protein DsbB compare
Psyr_0176 -0.5 -1.1 conserved hypothetical protein compare
Psyr_1666 -0.5 -1.9 Sporulation related protein compare
Psyr_4194 -0.5 -1.8 DnaJ central region:Heat shock protein DnaJ, N-terminal:Chaperone DnaJ, C-terminal compare
Psyr_3097 -0.5 -2.5 Peptidase U32 compare
Psyr_3527 -0.5 -2.8 glutathione-independent formaldehyde dehydrogenase compare
Psyr_0268 -0.5 -1.2 DSBA oxidoreductase compare
Psyr_1991 -0.5 -2.7 transcriptional regulator, IclR family compare


Specific Phenotypes

None in this experiment

For Pseudomonas syringae pv. syringae B728a in stress experiments

For stress Helenine across organisms