Experiment set9IT038 for Methanococcus maripaludis S2

Compare to:

H2 McCas with 40 minute oxygen exposure

200 most important genes:

  gene name fitness t score description  
MMP_RS01885 -6.1 -13.6 Gfo/Idh/MocA family oxidoreductase compare
MMP_RS08300 -6.0 -1.6 metal-sulfur cluster assembly factor compare
MMP_RS01890 -5.6 -7.6 nucleotide sugar dehydrogenase compare
MMP_RS06355 -5.5 -2.7 molybdenum cofactor biosynthesis protein MoaE compare
MMP_RS03960 -5.5 -1.2 hypothetical protein compare
MMP_RS07845 -5.3 -2.1 LL-diaminopimelate aminotransferase compare
MMP_RS01020 -5.2 -1.1 3 4-dihydroxy-2-butanone-4-phosphate synthase compare
MMP_RS01880 -5.2 -9.8 DegT/DnrJ/EryC1/StrS family aminotransferase compare
MMP_RS01610 -4.9 -3.9 hypothetical protein compare
MMP_RS01875 -4.9 -16.4 N-acetyltransferase compare
MMP_RS01005 -4.8 -1.5 riboflavin synthase compare
MMP_RS03640 -4.7 -4.9 archaeal proteasome endopeptidase complex subunit beta compare
MMP_RS03015 -4.6 -13.7 GTP 3' 8-cyclase MoaA compare
MMP_RS01325 -4.4 -2.7 dihydroneopterin aldolase family protein compare
MMP_RS05515 -4.3 -9.8 cyclic pyranopterin monophosphate synthase MoaC compare
MMP_RS05845 -4.3 -2.3 tRNA-intron lyase compare
MMP_RS05550 -4.2 -0.9 cation:proton antiporter compare
MMP_RS05250 -4.2 -2.7 NFYB/HAP3 family transcription factor subunit compare
MMP_RS01900 -4.2 -16.9 hypothetical protein compare
MMP_RS04685 -4.1 -4.4 DUF126 domain-containing protein compare
MMP_RS06670 -4.1 -7.8 glucose-6-phosphate isomerase compare
MMP_RS08635 -4.1 -2.6 UbiA family prenyltransferase compare
MMP_RS06350 -4.1 -7.6 HesA/MoeB/ThiF family protein compare
MMP_RS03445 -4.0 -1.2 methanogenesis marker 17 protein compare
MMP_RS03035 -4.0 -5.5 4-hydroxy-tetrahydrodipicolinate synthase compare
MMP_RS07545 -3.9 -1.2 HTH domain-containing protein compare
MMP_RS06900 -3.9 -3.4 coenzyme F420-reducing hydrogenase FrhD protein compare
MMP_RS01545 -3.9 -1.5 CBS domain-containing protein compare
MMP_RS00515 -3.9 -1.4 DUF655 domain-containing protein compare
MMP_RS03315 -3.9 -1.7 ferrous iron transport protein A compare
MMP_RS01925 -3.9 -12.1 DUF1616 domain-containing protein compare
MMP_RS03700 -3.9 -12.0 sodium:proton antiporter compare
MMP_RS01385 -3.9 -0.8 imidazole glycerol phosphate synthase subunit HisH compare
MMP_RS06120 -3.8 -2.9 UPF0147 family protein compare
MMP_RS01265 -3.8 -4.4 hypothetical protein compare
MMP_RS07635 -3.8 -11.0 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMP_RS02145 -3.8 -9.8 winged helix-turn-helix transcriptional regulator compare
MMP_RS01175 -3.8 -5.1 triphosphoribosyl-dephospho-CoA synthase compare
MMP_RS00300 -3.8 -1.0 6 7-dimethyl-8-ribityllumazine synthase compare
MMP_RS04720 -3.8 -4.7 DedA family protein compare
MMP_RS07075 -3.7 -5.7 phosphomannomutase/phosphoglucomutase compare
MMP_RS01380 -3.7 -6.3 PHP domain-containing protein compare
MMP_RS06725 -3.7 -14.2 hypothetical protein compare
MMP_RS07380 -3.6 -3.1 transcription elongation factor Spt5 compare
MMP_RS07730 -3.6 -2.3 pyruvate synthase subunit beta compare
MMP_RS01905 -3.6 -16.6 glycosyltransferase compare
MMP_RS09020 -3.6 -1.7 hypothetical protein compare
MMP_RS02195 -3.6 -5.3 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase compare
MMP_RS00735 -3.6 -4.4 5 10-methenyltetrahydromethanopterin hydrogenase compare
MMP_RS02010 -3.6 -14.9 PHP domain-containing protein compare
MMP_RS03025 -3.6 -7.4 molybdenum cofactor guanylyltransferase compare
MMP_RS08745 -3.5 -6.7 CDP-2 3-bis-(O-geranylgeranyl)-sn-glycerol synthase compare
MMP_RS02875 -3.5 -14.2 chorismate pyruvate-lyase family protein compare
MMP_RS00810 -3.5 -10.9 topoisomerase DNA-binding C4 zinc finger domain-containing protein compare
MMP_RS01725 -3.5 -5.4 class I SAM-dependent methyltransferase family protein compare
MMP_RS08720 -3.4 -1.9 4Fe-4S binding protein compare
MMP_RS08435 -3.4 -3.0 Era-like GTP-binding protein compare
MMP_RS03580 -3.4 -4.8 signal recognition particle-docking protein FtsY compare
MMP_RS07755 -3.4 -1.6 DUF555 domain-containing protein compare
MMP_RS01800 -3.3 -5.0 TIGR00303 family protein compare
MMP_RS02355 -3.3 -3.7 30S ribosomal protein S27ae compare
MMP_RS03600 -3.3 -2.5 triose-phosphate isomerase compare
MMP_RS05640 -3.3 -8.6 UTP--glucose-1-phosphate uridylyltransferase GalU compare
MMP_RS06315 -3.3 -1.2 cobalt-precorrin-7 (C(5))-methyltransferase compare
MMP_RS03390 -3.3 -9.1 malate dehydrogenase compare
MMP_RS06630 -3.3 -1.2 UPF0058 family protein compare
MMP_RS06980 -3.3 -9.0 tRNA 2-thiocytidine biosynthesis TtcA family protein compare
MMP_RS02900 -3.2 -0.8 imidazoleglycerol-phosphate dehydratase HisB compare
MMP_RS06230 -3.2 -3.7 helix-turn-helix domain-containing protein compare
MMP_RS01755 -3.2 -1.7 DUF2097 domain-containing protein compare
MMP_RS05265 -3.2 -3.3 2-isopropylmalate synthase compare
MMP_RS05920 -3.2 -1.0 50S ribosomal protein L37e compare
MMP_RS00315 -3.2 -10.0 Nif3-like dinuclear metal center hexameric protein compare
MMP_RS07605 -3.2 -5.2 diadenylate cyclase compare
MMP_RS06285 -3.1 -2.5 precorrin-6Y C5 15-methyltransferase (decarboxylating) subunit CbiT compare
MMP_RS07390 -3.1 -4.0 cell division protein FtsZ compare
MMP_RS03435 -3.1 -2.6 ketol-acid reductoisomerase compare
MMP_RS00110 -3.1 -3.9 hypothetical protein compare
MMP_RS02800 -3.1 -6.3 nucleotidyltransferase domain-containing protein compare
MMP_RS00695 -3.1 -1.1 biotin--[acetyl-CoA-carboxylase] ligase compare
MMP_RS00895 -3.1 -5.5 hypothetical protein compare
MMP_RS06885 -3.1 -3.3 50S ribosome-binding GTPase compare
MMP_RS02280 -3.1 -0.9 DUF211 domain-containing protein compare
MMP_RS05965 -3.1 -3.7 carboxymuconolactone decarboxylase family protein compare
MMP_RS07955 -3.1 -6.7 FumA C-terminus/TtdB family hydratase beta subunit compare
MMP_RS07750 -3.0 -6.0 DUF357 domain-containing protein compare
MMP_RS01225 -3.0 -6.6 DUF5379 domain-containing protein compare
MMP_RS08820 -3.0 -8.1 hypothetical protein compare
MMP_RS03475 -3.0 -0.9 hypothetical protein compare
MMP_RS04850 -3.0 -19.0 UPF0254 family protein compare
MMP_RS07005 -3.0 -0.8 4Fe-4S binding protein compare
MMP_RS02345 -3.0 -4.1 GTP-dependent dephospho-CoA kinase family protein compare
MMP_RS06895 -3.0 -2.2 selenocysteine-specific translation elongation factor compare
MMP_RS06340 -2.9 -10.7 phosphoadenosine phosphosulfate reductase family protein compare
MMP_RS01365 -2.9 -3.8 archaeal proteasome endopeptidase complex subunit alpha compare
MMP_RS06730 -2.9 -1.9 phosphopantothenate/pantothenate synthetase compare
MMP_RS07125 -2.9 -4.0 coenzyme F420-reducing hydrogenase FrhD protein compare
MMP_RS05580 -2.9 -19.4 glycosyltransferase compare
MMP_RS07330 -2.9 -22.1 membrane protein compare
MMP_RS02240 -2.9 -4.2 methanogenesis marker 7 protein compare
MMP_RS08790 -2.9 -2.3 translation initiation factor IF-2 subunit alpha compare
MMP_RS06625 -2.9 -2.4 DNA primase compare
MMP_RS06400 -2.9 -1.8 4Fe-4S binding protein compare
MMP_RS04710 -2.9 -2.4 hypothetical protein compare
MMP_RS03205 -2.9 -2.3 peptidyl-tRNA hydrolase Pth2 compare
MMP_RS04585 -2.8 -13.1 AIR synthase related protein compare
MMP_RS08440 -2.8 -4.0 cell division protein SepF compare
MMP_RS00040 -2.8 -6.9 TIGR03576 family pyridoxal phosphate-dependent enzyme compare
MMP_RS00685 -2.8 -5.3 2-phospho-L-lactate guanylyltransferase compare
MMP_RS07525 -2.8 -6.5 4Fe-4S binding protein compare
MMP_RS06105 -2.8 -12.2 hydrogenase maturation peptidase HycI compare
MMP_RS04090 -2.8 -4.6 hypothetical protein compare
MMP_RS05635 -2.8 -11.8 NAD-dependent epimerase/dehydratase family protein compare
MMP_RS07695 -2.8 -8.3 DUF3236 domain-containing protein compare
MMP_RS06395 -2.8 -4.1 ThiF family adenylyltransferase compare
MMP_RS06270 -2.8 -6.1 TIGR00300 family protein compare
MMP_RS05930 -2.8 -2.8 3-isopropylmalate dehydratase large subunit compare
MMP_RS03095 -2.7 -8.4 diphthine synthase compare
MMP_RS04890 -2.7 -1.2 adenylyltransferase/cytidyltransferase family protein compare
MMP_RS06925 -2.7 -3.5 ribonuclease VapC4 compare
MMP_RS00115 -2.7 -15.6 radical SAM protein compare
MMP_RS01830 -2.7 -2.1 tRNA-Val compare
MMP_RS00725 -2.7 -8.3 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdC compare
MMP_RS01500 -2.7 -3.0 CBS domain-containing protein compare
MMP_RS06020 -2.7 -4.6 archaeoflavoprotein AfpA compare
MMP_RS07700 -2.7 -10.5 DUF1188 domain-containing protein compare
MMP_RS00305 -2.7 -2.6 phosphoribosyl-ATP diphosphatase compare
MMP_RS01335 -2.7 -2.0 prefoldin subunit beta compare
MMP_RS07200 -2.7 -7.2 [5-(aminomethyl)furan-3-yl]methyl phosphate kinase compare
MMP_RS04605 -2.6 -6.2 cobalt ECF transporter T component CbiQ compare
MMP_RS05345 -2.6 -10.6 hypothetical protein compare
MMP_RS04775 -2.6 -4.8 adenosylhomocysteinase compare
MMP_RS06035 -2.6 -10.7 glycosyltransferase family 2 protein compare
MMP_RS08595 -2.6 -1.5 flagellar protein C compare
MMP_RS00900 -2.6 -2.2 50S ribosomal protein L39e compare
MMP_RS08650 -2.6 -4.5 glutamine--fructose-6-phosphate transaminase (isomerizing) compare
MMP_RS00985 -2.6 -7.1 CDC48 family AAA ATPase compare
MMP_RS01220 -2.6 -9.2 hypothetical protein compare
MMP_RS07135 -2.6 -11.4 coenzyme F420 hydrogenase subunit beta compare
MMP_RS04615 -2.6 -5.1 PDGLE domain-containing protein compare
MMP_RS03400 -2.6 -3.4 archease compare
MMP_RS02885 -2.6 -12.0 molybdopterin biosynthesis protein compare
MMP_RS04955 -2.5 -8.4 DNA topoisomerase I compare
MMP_RS04780 -2.5 -3.8 ribonuclease P compare
MMP_RS08070 -2.5 -6.1 DUF2096 domain-containing protein compare
MMP_RS00730 -2.5 -5.1 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdB compare
MMP_RS06975 -2.5 -2.7 sulfide-dependent adenosine diphosphate thiazole synthase compare
MMP_RS01840 -2.5 -8.7 TIGR00289 family protein compare
MMP_RS06295 -2.4 -8.3 methanogenesis marker 14 protein compare
MMP_RS03125 -2.4 -6.6 cell division ATPase MinD compare
MMP_RS01910 -2.4 -10.7 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
MMP_RS05815 -2.4 -2.2 NOL1/NOP2/sun family putative RNA methylase compare
MMP_RS00750 -2.4 -2.2 fumarate hydratase compare
MMP_RS02935 -2.3 -6.0 A24 family peptidase compare
MMP_RS02135 -2.3 -5.9 DUF5612 domain-containing protein compare
MMP_RS07120 -2.3 -11.4 coenzyme F420 hydrogenase subunit alpha compare
MMP_RS03110 -2.3 -6.7 glycosyltransferase family 2 protein compare
MMP_RS06865 -2.3 -2.8 HypC/HybG/HupF family hydrogenase formation chaperone compare
MMP_RS01955 -2.3 -4.1 hypothetical protein compare
MMP_RS07425 -2.3 -7.4 GTP-binding protein compare
MMP_RS08605 -2.2 -7.2 flagellar protein E compare
MMP_RS06685 -2.2 -13.1 formate dehydrogenase H subunit alpha selenocysteine-containing compare
MMP_RS01085 -2.2 -2.0 hypothetical protein compare
MMP_RS01895 -2.2 -12.8 flippase compare
MMP_RS01960 -2.2 -1.1 hypothetical protein compare
MMP_RS05425 -2.2 -4.5 monovalent cation/H+ antiporter complex subunit F compare
MMP_RS06600 -2.2 -1.7 class III signal peptide-containing protein compare
MMP_RS09045 -2.2 -16.0 class III signal peptide-containing protein compare
MMP_RS08600 -2.2 -3.0 flagellar protein D compare
MMP_RS06940 -2.2 -3.4 polyprenyl diphosphate synthase compare
MMP_RS07575 -2.1 -3.9 RNA ligase partner protein compare
MMP_RS07130 -2.1 -10.6 coenzyme F420 hydrogenase subunit gamma compare
MMP_RS07580 -2.1 -4.0 DUF356 domain-containing protein compare
MMP_RS04620 -2.1 -11.2 cobalt transporter CbiM compare
MMP_RS08620 -2.1 -7.3 flagellar accessory protein FlaH compare
MMP_RS04500 -2.1 -14.6 adenosylmethionine--8-amino-7-oxononanoate transaminase compare
MMP_RS06475 -2.1 -3.7 FAD-dependent oxidoreductase compare
MMP_RS05500 -2.0 -10.8 2-isopropylmalate synthase compare
MMP_RS07600 -2.0 -2.3 Ni-sirohydrochlorin a c-diamide synthase compare
MMP_RS08630 -2.0 -8.3 archaellar assembly protein FlaJ compare
MMP_RS08715 -2.0 -1.6 formylmethanofuran dehydrogenase subunit B compare
MMP_RS08210 -2.0 -2.4 phosphatidylglycerophosphatase A compare
MMP_RS07420 -2.0 -3.4 metalloregulator ArsR/SmtB family transcription factor compare
MMP_RS05925 -2.0 -4.4 small nuclear ribonucleoprotein compare
MMP_RS08460 -2.0 -2.6 proteasome-activating nucleotidase compare
MMP_RS00130 -2.0 -1.2 nickel-responsive transcriptional regulator NikR compare
MMP_RS02245 -2.0 -3.4 hypothetical protein compare
MMP_RS01295 -2.0 -11.8 hypothetical protein compare
MMP_RS05540 -2.0 -2.4 hypothetical protein compare
MMP_RS08585 -2.0 -8.2 flagellin compare
MMP_RS00240 -1.9 -14.1 type II secretion system F family protein compare
MMP_RS08590 -1.9 -5.4 flagellin compare
MMP_RS00250 -1.9 -14.3 Flp pilus assembly complex ATPase component TadA compare
MMP_RS08320 -1.9 -5.3 molybdopterin molybdotransferase MoeA compare
MMP_RS01270 -1.9 -13.5 prepilin peptidase compare
MMP_RS05440 -1.9 -8.7 winged helix-turn-helix transcriptional regulator compare
MMP_RS07735 -1.9 -0.9 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha compare
MMP_RS00050 -1.9 -5.8 AarF/UbiB family protein compare
MMP_RS01915 -1.8 -9.4 DUF354 domain-containing protein compare
MMP_RS00915 -1.8 -6.7 DUF116 domain-containing protein compare


Specific Phenotypes

For 8 genes in this experiment