Experiment set9IT037 for Methanococcus maripaludis S2

Compare to:

H2 McCas with 40 minute oxygen exposure

200 most important genes:

  gene name fitness t score description  
MMP_RS07845 -6.3 -2.4 LL-diaminopimelate aminotransferase compare
MMP_RS01885 -5.2 -12.9 Gfo/Idh/MocA family oxidoreductase compare
MMP_RS05250 -5.1 -2.4 NFYB/HAP3 family transcription factor subunit compare
MMP_RS04710 -5.1 -2.3 hypothetical protein compare
MMP_RS03315 -5.1 -1.7 ferrous iron transport protein A compare
MMP_RS01880 -4.8 -11.0 DegT/DnrJ/EryC1/StrS family aminotransferase compare
MMP_RS08720 -4.8 -1.8 4Fe-4S binding protein compare
MMP_RS01175 -4.5 -5.1 triphosphoribosyl-dephospho-CoA synthase compare
MMP_RS01875 -4.4 -15.7 N-acetyltransferase compare
MMP_RS01890 -4.4 -6.5 nucleotide sugar dehydrogenase compare
MMP_RS03640 -4.4 -5.6 archaeal proteasome endopeptidase complex subunit beta compare
MMP_RS01900 -4.3 -21.6 hypothetical protein compare
MMP_RS02145 -4.2 -12.3 winged helix-turn-helix transcriptional regulator compare
MMP_RS03015 -4.2 -12.5 GTP 3' 8-cyclase MoaA compare
MMP_RS03435 -4.2 -2.4 ketol-acid reductoisomerase compare
MMP_RS05515 -4.1 -10.6 cyclic pyranopterin monophosphate synthase MoaC compare
MMP_RS06120 -4.1 -3.1 UPF0147 family protein compare
MMP_RS08210 -4.1 -2.4 phosphatidylglycerophosphatase A compare
MMP_RS00300 -4.1 -1.0 6 7-dimethyl-8-ribityllumazine synthase compare
MMP_RS05555 -4.0 -1.6 DUF4040 domain-containing protein compare
MMP_RS06315 -4.0 -1.1 cobalt-precorrin-7 (C(5))-methyltransferase compare
MMP_RS06625 -4.0 -2.5 DNA primase compare
MMP_RS01325 -3.9 -2.7 dihydroneopterin aldolase family protein compare
MMP_RS06725 -3.9 -15.4 hypothetical protein compare
MMP_RS06350 -3.9 -9.0 HesA/MoeB/ThiF family protein compare
MMP_RS06630 -3.8 -1.3 UPF0058 family protein compare
MMP_RS05550 -3.8 -0.9 cation:proton antiporter compare
MMP_RS03700 -3.8 -14.1 sodium:proton antiporter compare
MMP_RS03475 -3.7 -0.9 hypothetical protein compare
MMP_RS01905 -3.7 -18.1 glycosyltransferase compare
MMP_RS00750 -3.7 -2.7 fumarate hydratase compare
MMP_RS06670 -3.7 -6.6 glucose-6-phosphate isomerase compare
MMP_RS01005 -3.6 -1.7 riboflavin synthase compare
MMP_RS01925 -3.6 -11.6 DUF1616 domain-containing protein compare
MMP_RS00315 -3.6 -9.2 Nif3-like dinuclear metal center hexameric protein compare
MMP_RS01265 -3.6 -4.0 hypothetical protein compare
MMP_RS06355 -3.6 -3.0 molybdenum cofactor biosynthesis protein MoaE compare
MMP_RS01545 -3.5 -1.5 CBS domain-containing protein compare
MMP_RS02900 -3.5 -0.8 imidazoleglycerol-phosphate dehydratase HisB compare
MMP_RS01020 -3.5 -1.3 3 4-dihydroxy-2-butanone-4-phosphate synthase compare
MMP_RS08440 -3.5 -4.0 cell division protein SepF compare
MMP_RS00810 -3.5 -11.4 topoisomerase DNA-binding C4 zinc finger domain-containing protein compare
MMP_RS06900 -3.5 -3.8 coenzyme F420-reducing hydrogenase FrhD protein compare
MMP_RS02010 -3.4 -13.6 PHP domain-containing protein compare
MMP_RS00110 -3.4 -4.7 hypothetical protein compare
MMP_RS01955 -3.4 -3.9 hypothetical protein compare
MMP_RS05640 -3.4 -9.3 UTP--glucose-1-phosphate uridylyltransferase GalU compare
MMP_RS04890 -3.4 -1.3 adenylyltransferase/cytidyltransferase family protein compare
MMP_RS02800 -3.4 -7.0 nucleotidyltransferase domain-containing protein compare
MMP_RS07075 -3.4 -5.0 phosphomannomutase/phosphoglucomutase compare
MMP_RS05965 -3.3 -4.4 carboxymuconolactone decarboxylase family protein compare
MMP_RS00735 -3.3 -4.5 5 10-methenyltetrahydromethanopterin hydrogenase compare
MMP_RS04720 -3.3 -5.4 DedA family protein compare
MMP_RS02875 -3.3 -12.7 chorismate pyruvate-lyase family protein compare
MMP_RS02195 -3.3 -5.3 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase compare
MMP_RS00895 -3.3 -5.1 hypothetical protein compare
MMP_RS06885 -3.3 -3.7 50S ribosome-binding GTPase compare
MMP_RS07635 -3.3 -9.6 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMP_RS07700 -3.3 -15.7 DUF1188 domain-containing protein compare
MMP_RS06230 -3.3 -3.8 helix-turn-helix domain-containing protein compare
MMP_RS06295 -3.3 -7.5 methanogenesis marker 14 protein compare
MMP_RS03205 -3.3 -2.3 peptidyl-tRNA hydrolase Pth2 compare
MMP_RS02240 -3.3 -5.1 methanogenesis marker 7 protein compare
MMP_RS04850 -3.2 -21.6 UPF0254 family protein compare
MMP_RS01365 -3.2 -3.4 archaeal proteasome endopeptidase complex subunit alpha compare
MMP_RS08790 -3.2 -2.6 translation initiation factor IF-2 subunit alpha compare
MMP_RS06980 -3.2 -11.3 tRNA 2-thiocytidine biosynthesis TtcA family protein compare
MMP_RS03025 -3.2 -6.5 molybdenum cofactor guanylyltransferase compare
MMP_RS07380 -3.2 -3.2 transcription elongation factor Spt5 compare
MMP_RS08820 -3.2 -7.6 hypothetical protein compare
MMP_RS03035 -3.2 -5.0 4-hydroxy-tetrahydrodipicolinate synthase compare
MMP_RS04615 -3.2 -5.1 PDGLE domain-containing protein compare
MMP_RS01220 -3.2 -9.7 hypothetical protein compare
MMP_RS06895 -3.1 -1.7 selenocysteine-specific translation elongation factor compare
MMP_RS01725 -3.1 -6.6 class I SAM-dependent methyltransferase family protein compare
MMP_RS03580 -3.1 -5.4 signal recognition particle-docking protein FtsY compare
MMP_RS05920 -3.1 -1.0 50S ribosomal protein L37e compare
MMP_RS01225 -3.1 -6.1 DUF5379 domain-containing protein compare
MMP_RS02245 -3.1 -4.5 hypothetical protein compare
MMP_RS05845 -3.1 -2.3 tRNA-intron lyase compare
MMP_RS04090 -3.1 -4.2 hypothetical protein compare
MMP_RS06340 -3.1 -9.9 phosphoadenosine phosphosulfate reductase family protein compare
MMP_RS01380 -3.1 -6.1 PHP domain-containing protein compare
MMP_RS03445 -3.1 -1.3 methanogenesis marker 17 protein compare
MMP_RS07605 -3.1 -5.6 diadenylate cyclase compare
MMP_RS08745 -3.1 -7.6 CDP-2 3-bis-(O-geranylgeranyl)-sn-glycerol synthase compare
MMP_RS04585 -3.1 -13.6 AIR synthase related protein compare
MMP_RS01500 -3.0 -3.4 CBS domain-containing protein compare
MMP_RS03400 -3.0 -3.3 archease compare
MMP_RS06285 -3.0 -2.6 precorrin-6Y C5 15-methyltransferase (decarboxylating) subunit CbiT compare
MMP_RS03390 -3.0 -10.3 malate dehydrogenase compare
MMP_RS00040 -3.0 -8.0 TIGR03576 family pyridoxal phosphate-dependent enzyme compare
MMP_RS00730 -3.0 -6.3 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdB compare
MMP_RS02355 -2.9 -3.8 30S ribosomal protein S27ae compare
MMP_RS06395 -2.9 -3.9 ThiF family adenylyltransferase compare
MMP_RS00725 -2.9 -9.3 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdC compare
MMP_RS07695 -2.9 -9.4 DUF3236 domain-containing protein compare
MMP_RS04775 -2.9 -4.3 adenosylhomocysteinase compare
MMP_RS06925 -2.9 -3.6 ribonuclease VapC4 compare
MMP_RS06020 -2.9 -5.7 archaeoflavoprotein AfpA compare
MMP_RS01960 -2.9 -1.2 hypothetical protein compare
MMP_RS08635 -2.9 -2.3 UbiA family prenyltransferase compare
MMP_RS05580 -2.9 -18.9 glycosyltransferase compare
MMP_RS06475 -2.9 -7.0 FAD-dependent oxidoreductase compare
MMP_RS05265 -2.8 -2.6 2-isopropylmalate synthase compare
MMP_RS01895 -2.8 -17.2 flippase compare
MMP_RS03600 -2.8 -2.9 triose-phosphate isomerase compare
MMP_RS08600 -2.8 -2.8 flagellar protein D compare
MMP_RS09020 -2.8 -2.0 hypothetical protein compare
MMP_RS01610 -2.8 -4.4 hypothetical protein compare
MMP_RS02345 -2.8 -3.6 GTP-dependent dephospho-CoA kinase family protein compare
MMP_RS02935 -2.8 -6.3 A24 family peptidase compare
MMP_RS03095 -2.8 -9.6 diphthine synthase compare
MMP_RS04685 -2.8 -4.5 DUF126 domain-containing protein compare
MMP_RS06400 -2.8 -1.7 4Fe-4S binding protein compare
MMP_RS05345 -2.8 -10.6 hypothetical protein compare
MMP_RS07525 -2.8 -7.9 4Fe-4S binding protein compare
MMP_RS06105 -2.7 -10.8 hydrogenase maturation peptidase HycI compare
MMP_RS05425 -2.7 -5.3 monovalent cation/H+ antiporter complex subunit F compare
MMP_RS05635 -2.7 -13.3 NAD-dependent epimerase/dehydratase family protein compare
MMP_RS02135 -2.7 -6.7 DUF5612 domain-containing protein compare
MMP_RS05930 -2.7 -3.1 3-isopropylmalate dehydratase large subunit compare
MMP_RS07135 -2.7 -12.1 coenzyme F420 hydrogenase subunit beta compare
MMP_RS08650 -2.7 -4.9 glutamine--fructose-6-phosphate transaminase (isomerizing) compare
MMP_RS03110 -2.7 -7.9 glycosyltransferase family 2 protein compare
MMP_RS00515 -2.7 -1.5 DUF655 domain-containing protein compare
MMP_RS06270 -2.7 -6.9 TIGR00300 family protein compare
MMP_RS08435 -2.7 -3.2 Era-like GTP-binding protein compare
MMP_RS07750 -2.6 -5.7 DUF357 domain-containing protein compare
MMP_RS07330 -2.6 -20.2 membrane protein compare
MMP_RS01910 -2.6 -12.6 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
MMP_RS00115 -2.6 -16.0 radical SAM protein compare
MMP_RS01335 -2.6 -2.8 prefoldin subunit beta compare
MMP_RS06730 -2.6 -2.1 phosphopantothenate/pantothenate synthetase compare
MMP_RS06035 -2.6 -13.7 glycosyltransferase family 2 protein compare
MMP_RS07200 -2.6 -7.4 [5-(aminomethyl)furan-3-yl]methyl phosphate kinase compare
MMP_RS04955 -2.6 -7.0 DNA topoisomerase I compare
MMP_RS00985 -2.5 -7.7 CDC48 family AAA ATPase compare
MMP_RS06940 -2.5 -3.8 polyprenyl diphosphate synthase compare
MMP_RS01800 -2.5 -4.3 TIGR00303 family protein compare
MMP_RS02885 -2.5 -13.4 molybdopterin biosynthesis protein compare
MMP_RS07005 -2.5 -0.8 4Fe-4S binding protein compare
MMP_RS07390 -2.5 -3.2 cell division protein FtsZ compare
MMP_RS01755 -2.5 -1.7 DUF2097 domain-containing protein compare
MMP_RS07730 -2.5 -2.1 pyruvate synthase subunit beta compare
MMP_RS00900 -2.5 -2.6 50S ribosomal protein L39e compare
MMP_RS07755 -2.4 -1.4 DUF555 domain-containing protein compare
MMP_RS00305 -2.4 -2.5 phosphoribosyl-ATP diphosphatase compare
MMP_RS07710 -2.4 -8.9 cell division protein FtsZ compare
MMP_RS05925 -2.4 -5.0 small nuclear ribonucleoprotein compare
MMP_RS03960 -2.4 -1.4 hypothetical protein compare
MMP_RS04780 -2.4 -4.0 ribonuclease P compare
MMP_RS01795 -2.4 -1.9 methanogenesis marker 6 protein compare
MMP_RS01700 -2.3 -1.2 dihydroxy-acid dehydratase compare
MMP_RS04500 -2.3 -16.8 adenosylmethionine--8-amino-7-oxononanoate transaminase compare
MMP_RS08070 -2.3 -5.4 DUF2096 domain-containing protein compare
MMP_RS07555 -2.3 -0.7 monovalent cation/H+ antiporter subunit E compare
MMP_RS01840 -2.3 -8.6 TIGR00289 family protein compare
MMP_RS07575 -2.3 -4.2 RNA ligase partner protein compare
MMP_RS07540 -2.3 -4.2 CBS domain-containing protein compare
MMP_RS08320 -2.3 -5.4 molybdopterin molybdotransferase MoeA compare
MMP_RS01915 -2.3 -13.9 DUF354 domain-containing protein compare
MMP_RS06485 -2.2 -1.2 zinc ribbon domain-containing protein compare
MMP_RS07955 -2.2 -5.5 FumA C-terminus/TtdB family hydratase beta subunit compare
MMP_RS04605 -2.2 -5.7 cobalt ECF transporter T component CbiQ compare
MMP_RS05540 -2.2 -3.3 hypothetical protein compare
MMP_RS07580 -2.2 -3.9 DUF356 domain-containing protein compare
MMP_RS06975 -2.2 -2.5 sulfide-dependent adenosine diphosphate thiazole synthase compare
MMP_RS07445 -2.1 -6.1 helix-turn-helix domain-containing protein compare
MMP_RS05500 -2.1 -10.7 2-isopropylmalate synthase compare
MMP_RS07120 -2.1 -12.7 coenzyme F420 hydrogenase subunit alpha compare
MMP_RS07425 -2.1 -5.7 GTP-binding protein compare
MMP_RS00685 -2.1 -3.7 2-phospho-L-lactate guanylyltransferase compare
MMP_RS07420 -2.1 -4.2 metalloregulator ArsR/SmtB family transcription factor compare
MMP_RS01830 -2.1 -2.0 tRNA-Val compare
MMP_RS01085 -2.1 -2.0 hypothetical protein compare
MMP_RS08595 -2.1 -1.3 flagellar protein C compare
MMP_RS00720 -2.1 -7.8 metal-dependent hydrolase compare
MMP_RS07735 -2.0 -1.0 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha compare
MMP_RS06685 -2.0 -13.6 formate dehydrogenase H subunit alpha selenocysteine-containing compare
MMP_RS08590 -2.0 -5.9 flagellin compare
MMP_RS04480 -2.0 -13.9 lysine 2 3-aminomutase compare
MMP_RS08300 -2.0 -1.4 metal-sulfur cluster assembly factor compare
MMP_RS05440 -2.0 -8.6 winged helix-turn-helix transcriptional regulator compare
MMP_RS07130 -2.0 -8.9 coenzyme F420 hydrogenase subunit gamma compare
MMP_RS09045 -2.0 -14.2 class III signal peptide-containing protein compare
MMP_RS06310 -2.0 -4.2 NAD(P)/FAD-dependent oxidoreductase compare
MMP_RS00050 -2.0 -8.5 AarF/UbiB family protein compare
MMP_RS08715 -2.0 -1.7 formylmethanofuran dehydrogenase subunit B compare
MMP_RS04485 -1.9 -14.0 putative beta-lysine N-acetyltransferase compare
MMP_RS03145 -1.9 -7.6 fibrillarin-like rRNA/tRNA 2'-O-methyltransferase compare
MMP_RS07125 -1.9 -4.5 coenzyme F420-reducing hydrogenase FrhD protein compare
MMP_RS03125 -1.9 -5.1 cell division ATPase MinD compare
MMP_RS00915 -1.9 -8.2 DUF116 domain-containing protein compare
MMP_RS08605 -1.9 -5.8 flagellar protein E compare
MMP_RS06130 -1.9 -4.5 peptidylprolyl isomerase compare
MMP_RS07600 -1.9 -2.8 Ni-sirohydrochlorin a c-diamide synthase compare
MMP_RS05295 -1.9 -10.7 minichromosome maintenance protein MCM compare
MMP_RS06865 -1.9 -2.0 HypC/HybG/HupF family hydrogenase formation chaperone compare
MMP_RS04835 -1.9 -9.1 chemotaxis protein CheC compare


Specific Phenotypes

For 7 genes in this experiment