Experiment set9IT037 for Klebsiella michiganensis M5al

Compare to:

LB in EcoFAB_10mL EcoFab with sand

200 most important genes:

  gene name fitness t score description  
BWI76_RS08530 -5.4 -2.2 protein TolA compare
BWI76_RS04510 -4.4 -3.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) compare
BWI76_RS23240 -4.3 -5.1 exonuclease V subunit gamma compare
BWI76_RS23230 -4.2 -2.9 exodeoxyribonuclease V subunit beta compare
BWI76_RS00180 -4.1 -2.3 F0F1 ATP synthase subunit epsilon compare
BWI76_RS01210 -3.6 -2.6 tyrosine recombinase XerC compare
BWI76_RS20650 -3.5 -3.2 phosphoenolpyruvate--protein phosphotransferase compare
BWI76_RS08405 -3.4 -3.7 succinate dehydrogenase flavoprotein subunit compare
BWI76_RS23895 -3.3 -2.1 Xaa-Pro aminopeptidase compare
BWI76_RS09660 -3.2 -2.1 DNA translocase FtsK compare
BWI76_RS26620 -3.1 -1.6 Fe-S biogenesis protein NfuA compare
BWI76_RS16965 -3.1 -2.8 murein lipoprotein compare
BWI76_RS08535 -3.1 -2.2 translocation protein TolB compare
BWI76_RS00720 -3.0 -3.8 DNA-binding response regulator compare
BWI76_RS09645 -2.9 -1.5 thioredoxin-disulfide reductase compare
BWI76_RS00240 -2.8 -2.9 FMN-binding protein MioC compare
BWI76_RS26085 -2.7 -2.1 3-dehydroquinate synthase compare
BWI76_RS01800 -2.7 -4.9 glucose-6-phosphate isomerase compare
BWI76_RS08525 -2.5 -2.9 colicin transporter compare
BWI76_RS05200 -2.4 -3.4 bifunctional uridylyltransferase/uridylyl-removing protein compare
BWI76_RS24080 -2.4 -2.8 DUF179 domain-containing protein compare
BWI76_RS02815 -2.2 -2.5 fructose-bisphosphatase class I compare
BWI76_RS08385 -2.2 -2.3 citrate (Si)-synthase compare
BWI76_RS23885 -2.2 -2.2 2-octaprenylphenol hydroxylase compare
BWI76_RS17720 -2.2 -1.1 muramoyltetrapeptide carboxypeptidase compare
BWI76_RS05015 -2.2 -3.2 transcriptional regulator compare
BWI76_RS08520 -2.1 -2.3 colicin transporter TolQ compare
BWI76_RS01385 -2.1 -3.0 potassium transporter compare
BWI76_RS24900 -2.1 -2.8 DeoR family transcriptional regulator compare
BWI76_RS04705 -2.1 -6.8 DNA-binding transcriptional regulator FruR compare
BWI76_RS21140 -2.1 -2.8 molecular chaperone HscA compare
BWI76_RS26095 -2.1 -1.8 shikimate kinase compare
BWI76_RS15825 -2.0 -1.4 hypothetical protein compare
BWI76_RS23265 -2.0 -2.7 hypothetical protein compare
BWI76_RS23830 -1.9 -6.1 hypothetical protein compare
BWI76_RS08425 -1.9 -4.7 succinyl-CoA ligase subunit beta compare
BWI76_RS07465 -1.8 -2.9 TetR family transcriptional regulator compare
BWI76_RS01185 -1.8 -2.2 adenylate cyclase compare
BWI76_RS11440 -1.8 -1.4 hypothetical protein compare
BWI76_RS08430 -1.8 -5.9 succinate--CoA ligase subunit alpha compare
BWI76_RS20785 -1.8 -1.4 ethanolamine utilization protein EutJ compare
BWI76_RS15835 -1.8 -1.5 hypothetical protein compare
BWI76_RS25335 -1.7 -3.9 stringent starvation protein A compare
BWI76_RS09190 -1.6 -2.9 hypothetical protein compare
BWI76_RS02610 -1.6 -6.3 transcriptional regulator compare
BWI76_RS26410 -1.6 -2.4 membrane protein compare
BWI76_RS12985 -1.6 -2.0 transcriptional regulator compare
BWI76_RS06475 -1.6 -1.6 protoheme IX farnesyltransferase compare
BWI76_RS08390 -1.6 -3.7 hypothetical protein compare
BWI76_RS10935 -1.5 -6.6 glucan biosynthesis glucosyltransferase H compare
BWI76_RS20130 -1.5 -4.9 NADH-quinone oxidoreductase subunit N compare
BWI76_RS20165 -1.5 -6.2 NADH-quinone oxidoreductase subunit G compare
BWI76_RS04525 -1.5 -1.9 4-hydroxythreonine-4-phosphate dehydrogenase PdxA compare
BWI76_RS26395 -1.5 -1.9 cell division protein FtsE compare
BWI76_RS24745 -1.5 -3.9 membrane protein compare
BWI76_RS04715 -1.5 -1.5 division/cell wall cluster transcriptional repressor MraZ compare
BWI76_RS21580 -1.5 -1.8 SsrA-binding protein compare
BWI76_RS08210 -1.5 -2.1 N-acetylglucosamine-6-phosphate deacetylase compare
BWI76_RS08205 -1.4 -3.2 DNA-binding transcriptional dual regulator NagC compare
BWI76_RS05120 -1.4 -6.8 bifunctional glycosyl transferase/transpeptidase compare
BWI76_RS11110 -1.4 -2.7 cell division protein YceG compare
BWI76_RS20375 -1.4 -1.5 membrane protein compare
BWI76_RS27430 -1.4 -1.2 (p)ppGpp synthetase compare
BWI76_RS01200 -1.4 -1.6 diaminopimelate epimerase compare
BWI76_RS07740 -1.4 -1.7 Fe2+-enterobactin ABC transporter substrate-binding protein compare
BWI76_RS01350 -1.4 -1.1 NAD(P)H-flavin reductase compare
BWI76_RS06800 -1.4 -1.2 DUF2496 domain-containing protein compare
BWI76_RS21100 -1.4 -2.8 nucleoside-diphosphate kinase compare
BWI76_RS05235 -1.4 -1.2 hypothetical protein compare
BWI76_RS06485 -1.4 -2.7 cytochrome o ubiquinol oxidase subunit III compare
BWI76_RS01125 -1.3 -5.7 4-alpha-L-fucosyltransferase compare
BWI76_RS01115 -1.3 -3.3 dTDP-4-amino-4,6-dideoxygalactose transaminase compare
BWI76_RS20160 -1.3 -2.8 NADH-quinone oxidoreductase subunit H compare
BWI76_RS16275 -1.3 -1.4 fumarate hydratase FumA compare
BWI76_RS24925 -1.3 -1.7 DnaA initiator-associating protein DiaA compare
BWI76_RS06520 -1.3 -5.2 trigger factor compare
BWI76_RS12860 -1.3 -1.4 hypothetical protein compare
BWI76_RS20795 -1.3 -1.1 ethanolamine catabolic microcompartment shell protein EutN compare
BWI76_RS01220 -1.2 -5.8 DNA-dependent helicase II compare
BWI76_RS19770 -1.2 -1.7 bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase compare
BWI76_RS06535 -1.2 -3.7 endopeptidase La compare
BWI76_RS15850 -1.2 -1.9 DUF1317 domain-containing protein compare
BWI76_RS21505 -1.2 -1.1 hypothetical protein compare
BWI76_RS20135 -1.2 -2.7 NADH-quinone oxidoreductase subunit M compare
BWI76_RS20750 -1.2 -1.0 carboxysome structural protein EutK compare
BWI76_RS21130 -1.2 -1.9 Fe-S assembly protein IscX compare
BWI76_RS25960 -1.2 -3.8 NUDIX hydrolase compare
BWI76_RS22625 -1.2 -1.7 transcriptional regulator compare
BWI76_RS15660 -1.2 -0.9 hypothetical protein compare
BWI76_RS00140 -1.2 -0.9 phosphate transport system regulator PhoU compare
BWI76_RS24270 -1.2 -2.2 membrane protein compare
BWI76_RS04305 -1.2 -1.0 molecular chaperone DnaJ compare
BWI76_RS24850 -1.2 -4.5 DeoR family transcriptional regulator compare
BWI76_RS00355 -1.2 -2.9 DNA polymerase I compare
BWI76_RS27170 -1.2 -4.6 MltR family transcriptional regulator compare
BWI76_RS00065 -1.1 -4.9 MurR/RpiR family transcriptional regulator compare
BWI76_RS17525 -1.1 -1.9 XshC-Cox1-family protein compare
BWI76_RS24740 -1.1 -2.4 GntR family transcriptional regulator compare
BWI76_RS27075 -1.1 -4.0 IclR family transcriptional regulator compare
BWI76_RS20895 -1.1 -3.2 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS26405 -1.1 -1.1 16S rRNA (guanine(966)-N(2))-methyltransferase compare
BWI76_RS19935 -1.1 -1.2 hypothetical protein compare
BWI76_RS07780 -1.1 -1.1 hypothetical protein compare
BWI76_RS15955 -1.1 -4.6 transcriptional regulator compare
BWI76_RS01165 -1.1 -3.5 protoheme IX biogenesis protein HemY compare
BWI76_RS06730 -1.1 -1.5 lac repressor compare
BWI76_RS19840 -1.1 -1.0 hypothetical protein compare
BWI76_RS27475 -1.1 -6.3 regulatory protein GntR family protein compare
BWI76_RS01110 -1.1 -2.3 TDP-fucosamine acetyltransferase compare
BWI76_RS12670 -1.1 -1.9 DNA polymerase V subunit UmuD compare
BWI76_RS20140 -1.1 -4.8 NADH-quinone oxidoreductase subunit L compare
BWI76_RS24075 -1.1 -2.7 glutathione synthase compare
BWI76_RS10930 -1.1 -6.1 glucan biosynthesis protein G compare
BWI76_RS15830 -1.1 -2.6 hypothetical protein compare
BWI76_RS27165 -1.1 -3.3 mannitol-1-phosphate 5-dehydrogenase compare
BWI76_RS11150 -1.1 -1.4 membrane protein compare
BWI76_RS09690 -1.1 -1.9 dimethyl sulfoxide reductase compare
BWI76_RS08395 -1.1 -1.6 succinate dehydrogenase cytochrome b556 large subunit compare
BWI76_RS18125 -1.1 -3.3 murein DD-endopeptidase MepM compare
BWI76_RS04955 -1.0 -1.7 hypoxanthine phosphoribosyltransferase compare
BWI76_RS22090 -1.0 -1.7 transcriptional regulator compare
BWI76_RS07595 -1.0 -2.1 putative oxidoreductase compare
BWI76_RS14065 -1.0 -1.2 hypothetical protein compare
BWI76_RS18360 -1.0 -1.5 aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase family protein compare
BWI76_RS05135 -1.0 -1.1 iron-hydroxamate transporter substrate-binding subunit compare
BWI76_RS01870 -1.0 -2.8 diacylglycerol kinase compare
BWI76_RS11520 -1.0 -1.0 hypothetical protein compare
BWI76_RS27200 -1.0 -2.3 tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL compare
BWI76_RS07675 -1.0 -3.7 DeoR family transcriptional regulator compare
BWI76_RS20190 -1.0 -3.9 NADH-quinone oxidoreductase subunit A compare
BWI76_RS00875 -1.0 -4.3 DNA-binding transcriptional regulator FabR compare
BWI76_RS26460 -1.0 -3.5 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
BWI76_RS16895 -1.0 -1.4 3-(3-hydroxy-phenyl)propionate transporter MhpT compare
BWI76_RS25375 -1.0 -2.3 hypothetical protein compare
BWI76_RS23125 -1.0 -1.3 propanediol dehydratase small subunit compare
BWI76_RS01325 -1.0 -1.2 twin-arginine translocase subunit TatB compare
BWI76_RS25225 -1.0 -2.1 ABC transporter permease compare
BWI76_RS25355 -1.0 -5.8 cell division protein ZapE compare
BWI76_RS21200 -1.0 -3.0 aldose epimerase compare
BWI76_RS07070 -1.0 -2.9 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS19055 -1.0 -6.2 dTDP-4-dehydrorhamnose 3,5-epimerase compare
BWI76_RS19700 -1.0 -1.3 deoxyribonuclease IV compare
BWI76_RS15035 -1.0 -1.4 metal ABC transporter permease compare
BWI76_RS04050 -1.0 -3.0 hydroxamate siderophore iron reductase FhuF compare
BWI76_RS26075 -1.0 -2.0 DNA adenine methylase compare
BWI76_RS20145 -0.9 -1.2 NADH-quinone oxidoreductase subunit K compare
BWI76_RS22205 -0.9 -2.0 cation ABC transporter ATP-binding protein compare
BWI76_RS01135 -0.9 -3.6 lipopolysaccharide N-acetylmannosaminouronosyltransferase compare
BWI76_RS09655 -0.9 -4.4 leucine-responsive regulatory protein compare
BWI76_RS13095 -0.9 -1.2 phenylacetate-CoA oxygenase subunit PaaB compare
BWI76_RS19480 -0.9 -1.5 transcriptional regulator compare
BWI76_RS23520 -0.9 -1.3 hypothetical protein compare
BWI76_RS06680 -0.9 -0.8 hypothetical protein compare
BWI76_RS22475 -0.9 -2.0 heme ABC transporter ATP-binding protein compare
BWI76_RS04645 -0.9 -4.6 3-dehydroquinase compare
BWI76_RS22690 -0.9 -1.6 adenylyl-sulfate kinase compare
BWI76_RS15840 -0.9 -2.1 prophage protein compare
BWI76_RS00400 -0.9 -0.9 glutamine synthetase compare
BWI76_RS25480 -0.9 -2.0 ribonuclease E/G compare
BWI76_RS01095 -0.9 -1.5 UDP-N-acetyl-D-mannosamine dehydrogenase compare
BWI76_RS11285 -0.9 -1.0 transcriptional regulator compare
BWI76_RS11155 -0.9 -1.5 penicillin-binding protein activator LpoB compare
BWI76_RS20180 -0.9 -3.2 NADH-quinone oxidoreductase subunit C/D compare
BWI76_RS01380 -0.9 -1.6 YigZ family protein compare
BWI76_RS20995 -0.9 -2.2 RNA degradosome polyphosphate kinase compare
BWI76_RS26175 -0.9 -2.5 DeoR/GlpR family transcriptional regulator compare
BWI76_RS07605 -0.9 -2.2 N-acetyltransferase GCN5 compare
BWI76_RS12090 -0.9 -0.9 HNH endonuclease compare
BWI76_RS00600 -0.8 -3.2 LacI family transcriptional regulator compare
BWI76_RS21255 -0.8 -2.5 hypothetical protein compare
BWI76_RS21570 -0.8 -1.3 RnfH family protein compare
BWI76_RS13400 -0.8 -3.0 GntR family transcriptional regulator compare
BWI76_RS20085 -0.8 -2.8 GNAT family N-acetyltransferase compare
BWI76_RS26455 -0.8 -2.2 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase compare
BWI76_RS13445 -0.8 -1.4 alpha/beta hydrolase compare
BWI76_RS23030 -0.8 -1.6 cobalamin biosynthesis protein CbiM compare
BWI76_RS26850 -0.8 -4.3 cellulose synthase catalytic subunit (UDP-forming) compare
BWI76_RS00285 -0.8 -1.7 D-ribose ABC transporter substrate-binding protein compare
BWI76_RS11965 -0.8 -3.2 orotidine-5'-phosphate decarboxylase compare
BWI76_RS26685 -0.8 -2.5 glutathione-disulfide reductase compare
BWI76_RS25420 -0.8 -1.9 malate dehydrogenase compare
BWI76_RS01615 -0.8 -4.1 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS15605 -0.8 -1.0 hypothetical protein compare
BWI76_RS13945 -0.8 -1.9 lysine exporter protein LysE/YggA compare
BWI76_RS06490 -0.8 -3.3 cytochrome ubiquinol oxidase subunit I compare
BWI76_RS02745 -0.8 -0.9 hypothetical protein compare
BWI76_RS06340 -0.8 -0.8 hypothetical protein compare
BWI76_RS27625 -0.8 -2.6 NADPH:quinone reductase compare
BWI76_RS15810 -0.8 -3.7 hypothetical protein compare
BWI76_RS22300 -0.8 -1.4 hydrogenase 3 maturation endopeptidase HyCI compare
BWI76_RS13595 -0.8 -2.7 transcriptional regulator compare
BWI76_RS16485 -0.8 -1.1 ribonuclease T compare
BWI76_RS26755 -0.8 -3.6 peptidase M16 compare
BWI76_RS17350 -0.8 -2.3 DNA-binding response regulator compare
BWI76_RS01105 -0.8 -3.1 glucose-1-phosphate thymidylyltransferase compare
BWI76_RS15205 -0.8 -1.8 succinate-semialdehyde dehydrogenase compare
BWI76_RS23915 -0.8 -1.5 5-formyltetrahydrofolate cyclo-ligase compare
BWI76_RS27290 -0.8 -4.3 hypothetical protein compare
BWI76_RS08720 -0.8 -1.2 imidazolonepropionase compare
BWI76_RS23920 -0.8 -3.2 D-3-phosphoglycerate dehydrogenase compare


Specific Phenotypes

None in this experiment

For Klebsiella michiganensis M5al in ecofab experiments

For ecofab sand across organisms