Experiment set9IT037 for Paraburkholderia bryophila 376MFSha3.1

Compare to:

Bu1_100

200 most important genes:

  gene name fitness t score description  
H281DRAFT_04087 -4.5 -1.5 hypothetical protein compare
H281DRAFT_00199 -4.4 -2.3 uroporphyrinogen III methyltransferase / synthase compare
H281DRAFT_06310 -4.3 -4.2 Barstar (barnase inhibitor) compare
H281DRAFT_06277 -3.8 -4.6 hypothetical protein compare
H281DRAFT_00886 -3.7 -4.2 two component transcriptional regulator, winged helix family compare
H281DRAFT_00074 -3.6 -2.5 UDP-galactose 4-epimerase compare
H281DRAFT_02224 -3.5 -2.3 rod shape-determining protein MreC compare
H281DRAFT_04635 -3.5 -1.6 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) compare
H281DRAFT_04119 -3.4 -4.8 ornithine carbamoyltransferase compare
H281DRAFT_04998 -3.3 -1.5 type III secretion protein T compare
H281DRAFT_00274 -3.2 -7.0 molecular chaperone HtpG compare
H281DRAFT_04082 -3.1 -4.2 ATP-dependent Clp protease ATP-binding subunit ClpA compare
H281DRAFT_00603 -3.0 -4.1 ZipA, C-terminal FtsZ-binding domain compare
H281DRAFT_00933 -3.0 -5.1 hypothetical protein compare
H281DRAFT_05551 -3.0 -8.1 transcriptional regulator, TetR family compare
H281DRAFT_04388 -3.0 -1.3 trehalose 6-phosphatase (EC 3.1.3.12) compare
H281DRAFT_03999 -3.0 -9.3 porin, GBP family compare
H281DRAFT_02235 -3.0 -3.7 multi-sensor signal transduction histidine kinase compare
H281DRAFT_04733 -3.0 -3.1 Protein of unknown function (DUF3318) compare
H281DRAFT_04734 -2.9 -5.4 Uncharacterized membrane protein YqjE compare
H281DRAFT_00843 -2.8 -3.1 lipoprotein NlpD compare
H281DRAFT_00531 -2.8 -5.3 hypothetical protein compare
H281DRAFT_02856 -2.7 -1.6 Protein of unknown function (DUF1488) compare
H281DRAFT_04713 -2.7 -6.0 membrane-associated protein compare
H281DRAFT_02670 -2.6 -1.6 transcriptional regulator, GntR family compare
H281DRAFT_01799 -2.6 -1.7 RNA polymerase sigma-70 factor, ECF subfamily compare
H281DRAFT_05351 -2.6 -2.6 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain compare
H281DRAFT_03592 -2.6 -3.5 hypothetical protein compare
H281DRAFT_00777 -2.5 -2.3 SOS-response transcriptional repressor, LexA compare
H281DRAFT_02366 -2.5 -6.2 hypothetical protein compare
H281DRAFT_03266 -2.5 -1.1 Nicotinamidase-related amidase compare
H281DRAFT_01798 -2.4 -2.3 Transmembrane transcriptional regulator (anti-sigma factor RsiW) compare
H281DRAFT_03953 -2.4 -2.8 hypothetical protein compare
H281DRAFT_00194 -2.4 -2.0 argininosuccinate lyase compare
H281DRAFT_01483 -2.4 -1.9 hypothetical protein compare
H281DRAFT_02245 -2.3 -8.3 transcriptional regulator, LysR family compare
H281DRAFT_02136 -2.3 -1.9 hypothetical protein compare
H281DRAFT_05185 -2.3 -3.3 hypothetical protein compare
H281DRAFT_01222 -2.3 -1.5 monosaccharide ABC transporter membrane protein, CUT2 family compare
H281DRAFT_00888 -2.2 -3.1 phytoene synthase compare
H281DRAFT_00175 -2.2 -3.7 DNA translocase FtsK compare
H281DRAFT_01717 -2.2 -1.4 L-alanine-DL-glutamate epimerase compare
H281DRAFT_00757 -2.1 -1.0 hypothetical protein compare
H281DRAFT_00958 -2.1 -3.1 Membrane protein involved in the export of O-antigen and teichoic acid compare
H281DRAFT_00075 -2.1 -2.2 Glycosyltransferase involved in cell wall bisynthesis compare
H281DRAFT_01069 -2.1 -1.2 Cytosine/adenosine deaminase compare
H281DRAFT_00378 -2.1 -1.9 glutamate synthase (NADPH/NADH) small chain compare
H281DRAFT_06365 -2.1 -2.5 pilus assembly protein CpaC compare
H281DRAFT_04735 -2.0 -3.1 Membrane-anchored ribosome-binding protein, inhibits growth in stationary phase, ElaB/YqjD/DUF883 family compare
H281DRAFT_04837 -2.0 -8.5 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family compare
H281DRAFT_05755 -2.0 -1.6 flagellar biosynthesis protein FlhG compare
H281DRAFT_00559 -2.0 -1.7 hypothetical protein compare
H281DRAFT_00286 -2.0 -2.6 transaldolase compare
H281DRAFT_00710 -2.0 -1.1 tRNA_Leu_CAG compare
H281DRAFT_00406 -2.0 -2.0 Signal transduction histidine kinase compare
H281DRAFT_02216 -2.0 -6.2 MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG compare
H281DRAFT_05814 -2.0 -6.7 Predicted transcription regulator, contains HTH domain, MarR family compare
H281DRAFT_04515 -2.0 -2.5 RNAse G compare
H281DRAFT_04482 -2.0 -1.8 NAD(P)H dehydrogenase (quinone) compare
H281DRAFT_06163 -2.0 -1.1 hypothetical protein compare
H281DRAFT_04518 -1.9 -3.4 ribosome-associated protein compare
H281DRAFT_01668 -1.9 -2.1 gamma-aminobutyrate:proton symporter, AAT family compare
H281DRAFT_05087 -1.9 -1.7 exodeoxyribonuclease V alpha subunit compare
H281DRAFT_02003 -1.9 -2.9 Rhodanese-related sulfurtransferase compare
H281DRAFT_06273 -1.9 -1.6 AmpD protein compare
H281DRAFT_00713 -1.9 -2.1 23S rRNA Gm-2251 2'-O-methyltransferase compare
H281DRAFT_06288 -1.8 -4.0 UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase compare
H281DRAFT_06399 -1.8 -2.4 transcriptional regulator, GntR family compare
H281DRAFT_05632 -1.8 -2.7 hypothetical protein compare
H281DRAFT_06372 -1.8 -3.8 TadE-like protein compare
H281DRAFT_04694 -1.7 -5.5 heat-inducible transcription repressor HrcA compare
H281DRAFT_05154 -1.7 -3.3 murein tetrapeptidase LD-carboxypeptidase (EC:3.4.17.13). Serine peptidase. MEROPS family S66 compare
H281DRAFT_02974 -1.7 -4.0 anaerobic ribonucleoside-triphosphate reductase activating protein compare
H281DRAFT_01066 -1.7 -2.2 Phenylpropionate dioxygenase, large terminal subunit compare
H281DRAFT_03314 -1.7 -1.0 hypothetical protein compare
H281DRAFT_03315 -1.7 -1.4 HSP20 family protein compare
H281DRAFT_02205 -1.7 -1.6 transcriptional regulator, TraR/DksA family compare
H281DRAFT_02054 -1.7 -7.2 penicillin-binding protein 6. Serine peptidase. MEROPS family S11 compare
H281DRAFT_00240 -1.7 -5.7 two component, sigma54 specific, transcriptional regulator, NtrC subfamily, Fis family compare
H281DRAFT_04033 -1.7 -2.5 YggT family protein compare
H281DRAFT_01224 -1.7 -1.1 Predicted metal-dependent hydrolase, TIM-barrel fold compare
H281DRAFT_06315 -1.6 -1.3 glyceraldehyde-3-phosphate dehydrogenase (NAD+) compare
H281DRAFT_01679 -1.6 -1.3 shikimate dehydrogenase (EC 1.1.1.25) compare
H281DRAFT_06253 -1.6 -5.4 cell division protein ZapD compare
H281DRAFT_04120 -1.6 -3.6 argininosuccinate synthase compare
H281DRAFT_06272 -1.6 -1.0 uncharacterized protein compare
H281DRAFT_02404 -1.6 -9.0 L-proline dehydrogenase /delta-1-pyrroline-5-carboxylate dehydrogenase compare
H281DRAFT_01235 -1.6 -3.3 DNA-binding protein H-NS compare
H281DRAFT_03440 -1.6 -0.6 PAP2 superfamily protein compare
H281DRAFT_06438 -1.6 -1.7 hypothetical protein compare
H281DRAFT_00413 -1.6 -1.1 Protein of unknown function (DUF2569) compare
H281DRAFT_00543 -1.6 -2.1 peptidyl-prolyl cis-trans isomerase B (cyclophilin B) compare
H281DRAFT_01067 -1.5 -0.9 NitT/TauT family transport system ATP-binding protein compare
H281DRAFT_02602 -1.5 -1.0 DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain compare
H281DRAFT_03795 -1.5 -1.8 hypothetical protein compare
H281DRAFT_03610 -1.5 -3.0 squalene-hopene/tetraprenyl-beta-curcumene cyclase compare
H281DRAFT_00409 -1.5 -1.6 bacterioferritin compare
H281DRAFT_00133 -1.5 -3.4 cell division protein ZapA compare
H281DRAFT_01522 -1.5 -1.5 amino acid ABC transporter substrate-binding protein, PAAT family compare
H281DRAFT_03346 -1.5 -1.3 Metal-dependent hydrolase, endonuclease/exonuclease/phosphatase family compare
H281DRAFT_05943 -1.5 -1.5 Permease of the drug/metabolite transporter (DMT) superfamily compare
H281DRAFT_01946 -1.5 -3.6 hypothetical protein compare
H281DRAFT_00359 -1.5 -1.4 Acyl-CoA dehydrogenase compare
H281DRAFT_02218 -1.5 -3.1 exodeoxyribonuclease-3 compare
H281DRAFT_02262 -1.5 -2.7 hypothetical protein compare
H281DRAFT_04376 -1.5 -7.1 Excinuclease ABC subunit C compare
H281DRAFT_00390 -1.5 -1.0 Beta-barrel assembly machine subunit BamC compare
H281DRAFT_03221 -1.5 -1.6 DNA-binding transcriptional regulator, LysR family compare
H281DRAFT_04297 -1.4 -6.8 adenosylcobinamide-phosphate synthase compare
H281DRAFT_02956 -1.4 -1.7 transcriptional regulator, GntR family compare
H281DRAFT_05961 -1.4 -1.0 D-3-phosphoglycerate dehydrogenase compare
H281DRAFT_01192 -1.4 -0.9 Glycine/D-amino acid oxidase (deaminating) compare
H281DRAFT_00469 -1.4 -2.3 phasin family protein compare
H281DRAFT_06276 -1.4 -2.3 hypothetical protein compare
H281DRAFT_01078 -1.4 -1.1 dihydroxycyclohexadiene carboxylate dehydrogenase compare
H281DRAFT_06462 -1.4 -1.6 hypothetical protein compare
H281DRAFT_01303 -1.4 -1.8 triphosphoribosyl-dephospho-CoA synthase compare
H281DRAFT_05146 -1.4 -1.6 methyltransferase, TIGR00027 family compare
H281DRAFT_02080 -1.4 -4.1 cell division protein FtsN compare
H281DRAFT_05080 -1.4 -1.7 Predicted metal-dependent enzyme of the double-stranded beta helix superfamily compare
H281DRAFT_02405 -1.4 -4.5 amino acid/amide ABC transporter substrate-binding protein, HAAT family compare
H281DRAFT_03713 -1.4 -1.8 NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family compare
H281DRAFT_05021 -1.4 -1.0 Response regulator compare
H281DRAFT_06039 -1.3 -2.0 molybdate transport system ATP-binding protein compare
H281DRAFT_00854 -1.3 -3.0 polyhydroxyalkanoate synthesis repressor PhaR compare
H281DRAFT_05335 -1.3 -2.6 Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD compare
H281DRAFT_04585 -1.3 -1.4 hypothetical protein compare
H281DRAFT_01243 -1.3 -1.6 lipoprotein, YaeC family compare
H281DRAFT_03384 -1.3 -0.9 Cytochrome c, mono- and diheme variants compare
H281DRAFT_03583 -1.3 -1.5 hypothetical protein compare
H281DRAFT_06474 -1.3 -1.3 amino acid ABC transporter membrane protein 1, PAAT family compare
H281DRAFT_06232 -1.3 -3.5 peptidoglycan synthetase FtsI compare
H281DRAFT_05494 -1.3 -1.1 DNA-binding transcriptional regulator, GntR family compare
H281DRAFT_03627 -1.3 -5.4 endonuclease G compare
H281DRAFT_06385 -1.3 -1.2 hypothetical protein compare
H281DRAFT_01011 -1.3 -1.3 Uncharacterized membrane protein YkgB compare
H281DRAFT_03108 -1.3 -1.0 hypothetical protein compare
H281DRAFT_01098 -1.3 -1.4 hypothetical protein compare
H281DRAFT_00308 -1.3 -3.3 Superfamily II DNA and RNA helicase compare
H281DRAFT_00366 -1.3 -1.6 phospholipase C compare
H281DRAFT_01544 -1.2 -1.5 Glycine/D-amino acid oxidase (deaminating) compare
H281DRAFT_03324 -1.2 -1.8 Low affinity Fe/Cu permease compare
H281DRAFT_01083 -1.2 -1.8 hypothetical protein compare
H281DRAFT_02339 -1.2 -6.5 glutamate-cysteine ligase compare
H281DRAFT_00189 -1.2 -1.8 heptosyltransferase-1 compare
H281DRAFT_04858 -1.2 -1.0 hypothetical protein compare
H281DRAFT_03303 -1.2 -1.5 NAD+ synthase (glutamine-hydrolysing) compare
H281DRAFT_00345 -1.2 -1.3 Transglutaminase-like enzyme, putative cysteine protease compare
H281DRAFT_04628 -1.2 -1.0 FdhD protein compare
H281DRAFT_03885 -1.2 -1.0 Protein of unknown function (DUF1656) compare
H281DRAFT_05767 -1.2 -2.7 flagellar basal-body rod protein FlgG compare
H281DRAFT_05046 -1.2 -2.3 Signal transduction histidine kinase compare
H281DRAFT_04226 -1.2 -0.9 hypothetical protein compare
H281DRAFT_06008 -1.2 -2.9 RNA polymerase, sigma 70 subunit, RpoD compare
H281DRAFT_03117 -1.2 -1.8 sarcosine oxidase subunit beta compare
H281DRAFT_02375 -1.2 -2.2 amino acid/amide ABC transporter ATP-binding protein 1, HAAT family compare
H281DRAFT_00048 -1.2 -2.2 hypothetical protein compare
H281DRAFT_05337 -1.2 -3.5 phosphinothricin acetyltransferase compare
H281DRAFT_01125 -1.2 -0.9 protein of unknown function (DUF2760) compare
H281DRAFT_05172 -1.2 -2.3 hypothetical protein compare
H281DRAFT_04598 -1.2 -1.1 putative toxin-antitoxin system toxin component, PIN family compare
H281DRAFT_05394 -1.1 -1.1 hypothetical protein compare
H281DRAFT_00236 -1.1 -3.2 sigma54 specific transcriptional regulator, Fis family compare
H281DRAFT_05289 -1.1 -1.6 N-hydroxyarylamine O-acetyltransferase compare
H281DRAFT_05646 -1.1 -1.7 hypothetical protein compare
H281DRAFT_02258 -1.1 -4.6 DNA adenine methylase compare
H281DRAFT_04467 -1.1 -4.2 UDP-glucose pyrophosphorylase compare
H281DRAFT_05274 -1.1 -1.4 Uncharacterized protein YcsI, UPF0317 family compare
H281DRAFT_03112 -1.1 -2.2 Inosine-uridine nucleoside N-ribohydrolase compare
H281DRAFT_00848 -1.1 -0.9 ribosomal large subunit pseudouridine synthase D (EC 5.4.99.-) compare
H281DRAFT_04259 -1.1 -5.3 anhydro-N-acetylmuramic acid kinase compare
H281DRAFT_04453 -1.1 -2.5 amino acid/amide ABC transporter ATP-binding protein 1, HAAT family compare
H281DRAFT_02399 -1.1 -3.9 hypothetical protein compare
H281DRAFT_04150 -1.1 -1.5 monosaccharide ABC transporter substrate-binding protein, CUT2 family compare
H281DRAFT_05227 -1.1 -2.8 monosaccharide ABC transporter membrane protein, CUT2 family compare
H281DRAFT_01188 -1.1 -3.4 3-oxoacyl-[acyl-carrier protein] reductase compare
H281DRAFT_02966 -1.1 -1.2 nucleoside-binding protein compare
H281DRAFT_04820 -1.1 -2.4 Bis(5'nucleosyl)-tetraphosphatase, ApaH compare
H281DRAFT_01139 -1.1 -1.2 2-furoyl-CoA dehydrogenase 2Fe-2S iron sulfur subunit compare
H281DRAFT_05635 -1.1 -5.2 putative ATP-binding cassette transporter compare
H281DRAFT_00717 -1.1 -1.3 HTH-type transcriptional regulator / antitoxin HigA compare
H281DRAFT_02501 -1.1 -2.4 hypothetical protein compare
H281DRAFT_04654 -1.1 -0.9 NAD(P) transhydrogenase subunit alpha compare
H281DRAFT_04781 -1.1 -1.0 putative colanic acid biosynthesis acetyltransferase WcaF compare
H281DRAFT_05984 -1.1 -2.0 conserved hypothetical protein compare
H281DRAFT_01443 -1.1 -1.2 RND family efflux transporter, MFP subunit compare
H281DRAFT_04838 -1.1 -7.2 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family compare
H281DRAFT_06506 -1.1 -1.2 NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family compare
H281DRAFT_04924 -1.1 -3.2 iron complex outermembrane recepter protein compare
H281DRAFT_04083 -1.1 -3.1 ATP-dependent Clp protease adaptor protein ClpS compare
H281DRAFT_04243 -1.1 -1.8 magnesium and cobalt transporter compare
H281DRAFT_03917 -1.1 -0.8 Uncharacterized integral membrane protein compare
H281DRAFT_00529 -1.0 -1.7 KUP system potassium uptake protein compare
H281DRAFT_00680 -1.0 -1.5 Glycosyltransferases involved in cell wall biogenesis compare
H281DRAFT_00718 -1.0 -2.0 tyrosine-protein kinase Etk/Wzc compare
H281DRAFT_06083 -1.0 -1.9 heat shock protein Hsp20 compare
H281DRAFT_02941 -1.0 -1.9 Crotonobetainyl-CoA:carnitine CoA-transferase CaiB compare
H281DRAFT_01965 -1.0 -0.9 hypothetical protein compare
H281DRAFT_04357 -1.0 -3.4 sigma E regulatory protein, MucB/RseB compare
H281DRAFT_01677 -1.0 -4.0 3-dehydroquinate dehydratase compare


Specific Phenotypes

For 12 genes in this experiment