Experiment set9IT035 for Methanococcus maripaludis S2

Compare to:

H2 McCas with 20 minute oxygen exposure

200 most important genes:

  gene name fitness t score description  
MMP_RS02145 -5.0 -13.9 winged helix-turn-helix transcriptional regulator compare
MMP_RS01875 -4.9 -15.6 N-acetyltransferase compare
MMP_RS01890 -4.8 -7.5 nucleotide sugar dehydrogenase compare
MMP_RS00300 -4.5 -1.3 6 7-dimethyl-8-ribityllumazine synthase compare
MMP_RS01925 -4.4 -14.0 DUF1616 domain-containing protein compare
MMP_RS01885 -4.4 -12.5 Gfo/Idh/MocA family oxidoreductase compare
MMP_RS01900 -4.1 -20.9 hypothetical protein compare
MMP_RS01880 -4.1 -12.2 DegT/DnrJ/EryC1/StrS family aminotransferase compare
MMP_RS01905 -4.1 -20.3 glycosyltransferase compare
MMP_RS05550 -4.1 -1.2 cation:proton antiporter compare
MMP_RS08720 -3.9 -2.6 4Fe-4S binding protein compare
MMP_RS07075 -3.9 -6.1 phosphomannomutase/phosphoglucomutase compare
MMP_RS01955 -3.7 -4.4 hypothetical protein compare
MMP_RS00695 -3.6 -1.4 biotin--[acetyl-CoA-carboxylase] ligase compare
MMP_RS07380 -3.5 -3.5 transcription elongation factor Spt5 compare
MMP_RS01175 -3.4 -5.6 triphosphoribosyl-dephospho-CoA synthase compare
MMP_RS03015 -3.4 -16.1 GTP 3' 8-cyclase MoaA compare
MMP_RS08650 -3.4 -5.7 glutamine--fructose-6-phosphate transaminase (isomerizing) compare
MMP_RS01910 -3.3 -15.7 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
MMP_RS05515 -3.3 -10.2 cyclic pyranopterin monophosphate synthase MoaC compare
MMP_RS03960 -3.3 -1.7 hypothetical protein compare
MMP_RS03475 -3.3 -1.1 hypothetical protein compare
MMP_RS07390 -3.3 -3.8 cell division protein FtsZ compare
MMP_RS04720 -3.2 -5.5 DedA family protein compare
MMP_RS01020 -3.2 -1.7 3 4-dihydroxy-2-butanone-4-phosphate synthase compare
MMP_RS04890 -3.2 -1.7 adenylyltransferase/cytidyltransferase family protein compare
MMP_RS06120 -3.2 -3.7 UPF0147 family protein compare
MMP_RS02900 -3.1 -1.1 imidazoleglycerol-phosphate dehydratase HisB compare
MMP_RS06670 -3.1 -7.8 glucose-6-phosphate isomerase compare
MMP_RS06355 -3.1 -3.5 molybdenum cofactor biosynthesis protein MoaE compare
MMP_RS08435 -3.1 -4.4 Era-like GTP-binding protein compare
MMP_RS08300 -3.1 -2.1 metal-sulfur cluster assembly factor compare
MMP_RS00735 -3.1 -5.7 5 10-methenyltetrahydromethanopterin hydrogenase compare
MMP_RS08745 -3.1 -8.5 CDP-2 3-bis-(O-geranylgeranyl)-sn-glycerol synthase compare
MMP_RS03035 -3.1 -6.4 4-hydroxy-tetrahydrodipicolinate synthase compare
MMP_RS06400 -3.0 -1.8 4Fe-4S binding protein compare
MMP_RS06725 -3.0 -15.0 hypothetical protein compare
MMP_RS01380 -3.0 -7.1 PHP domain-containing protein compare
MMP_RS08440 -3.0 -4.6 cell division protein SepF compare
MMP_RS00515 -3.0 -1.9 DUF655 domain-containing protein compare
MMP_RS02010 -3.0 -13.8 PHP domain-containing protein compare
MMP_RS03400 -2.9 -4.7 archease compare
MMP_RS07845 -2.9 -3.4 LL-diaminopimelate aminotransferase compare
MMP_RS05640 -2.9 -9.2 UTP--glucose-1-phosphate uridylyltransferase GalU compare
MMP_RS00315 -2.9 -11.0 Nif3-like dinuclear metal center hexameric protein compare
MMP_RS06315 -2.9 -1.6 cobalt-precorrin-7 (C(5))-methyltransferase compare
MMP_RS00895 -2.8 -5.3 hypothetical protein compare
MMP_RS01915 -2.8 -19.3 DUF354 domain-containing protein compare
MMP_RS08790 -2.8 -3.6 translation initiation factor IF-2 subunit alpha compare
MMP_RS01830 -2.8 -2.8 tRNA-Val compare
MMP_RS03700 -2.8 -11.2 sodium:proton antiporter compare
MMP_RS06630 -2.8 -1.7 UPF0058 family protein compare
MMP_RS01610 -2.8 -5.5 hypothetical protein compare
MMP_RS00305 -2.8 -3.2 phosphoribosyl-ATP diphosphatase compare
MMP_RS01960 -2.8 -1.6 hypothetical protein compare
MMP_RS01725 -2.8 -7.4 class I SAM-dependent methyltransferase family protein compare
MMP_RS02240 -2.8 -4.2 methanogenesis marker 7 protein compare
MMP_RS04605 -2.7 -8.0 cobalt ECF transporter T component CbiQ compare
MMP_RS01895 -2.7 -19.5 flippase compare
MMP_RS00725 -2.7 -9.7 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdC compare
MMP_RS03025 -2.6 -8.3 molybdenum cofactor guanylyltransferase compare
MMP_RS03640 -2.6 -6.7 archaeal proteasome endopeptidase complex subunit beta compare
MMP_RS07630 -2.6 -2.1 ATP-binding cassette domain-containing protein compare
MMP_RS01500 -2.6 -3.0 CBS domain-containing protein compare
MMP_RS00810 -2.6 -10.0 topoisomerase DNA-binding C4 zinc finger domain-containing protein compare
MMP_RS06980 -2.6 -10.4 tRNA 2-thiocytidine biosynthesis TtcA family protein compare
MMP_RS03315 -2.6 -1.5 ferrous iron transport protein A compare
MMP_RS06350 -2.6 -7.7 HesA/MoeB/ThiF family protein compare
MMP_RS00040 -2.6 -5.8 TIGR03576 family pyridoxal phosphate-dependent enzyme compare
MMP_RS06925 -2.6 -3.7 ribonuclease VapC4 compare
MMP_RS00730 -2.5 -7.3 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdB compare
MMP_RS07580 -2.5 -4.5 DUF356 domain-containing protein compare
MMP_RS07605 -2.5 -5.6 diadenylate cyclase compare
MMP_RS07635 -2.5 -8.8 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMP_RS08715 -2.5 -2.8 formylmethanofuran dehydrogenase subunit B compare
MMP_RS06895 -2.5 -2.6 selenocysteine-specific translation elongation factor compare
MMP_RS01325 -2.5 -3.0 dihydroneopterin aldolase family protein compare
MMP_RS02800 -2.5 -7.1 nucleotidyltransferase domain-containing protein compare
MMP_RS01335 -2.5 -2.7 prefoldin subunit beta compare
MMP_RS04850 -2.5 -17.8 UPF0254 family protein compare
MMP_RS02195 -2.5 -5.3 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase compare
MMP_RS02875 -2.5 -10.7 chorismate pyruvate-lyase family protein compare
MMP_RS08820 -2.5 -9.3 hypothetical protein compare
MMP_RS06885 -2.4 -3.9 50S ribosome-binding GTPase compare
MMP_RS04090 -2.4 -5.5 hypothetical protein compare
MMP_RS01365 -2.4 -4.0 archaeal proteasome endopeptidase complex subunit alpha compare
MMP_RS05250 -2.4 -2.7 NFYB/HAP3 family transcription factor subunit compare
MMP_RS00130 -2.4 -1.6 nickel-responsive transcriptional regulator NikR compare
MMP_RS07735 -2.4 -1.3 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha compare
MMP_RS03205 -2.4 -2.7 peptidyl-tRNA hydrolase Pth2 compare
MMP_RS06105 -2.4 -8.8 hydrogenase maturation peptidase HycI compare
MMP_RS04615 -2.4 -4.7 PDGLE domain-containing protein compare
MMP_RS06730 -2.4 -2.7 phosphopantothenate/pantothenate synthetase compare
MMP_RS01220 -2.4 -8.5 hypothetical protein compare
MMP_RS07700 -2.4 -11.9 DUF1188 domain-containing protein compare
MMP_RS02355 -2.4 -4.3 30S ribosomal protein S27ae compare
MMP_RS01265 -2.4 -4.7 hypothetical protein compare
MMP_RS03110 -2.4 -7.2 glycosyltransferase family 2 protein compare
MMP_RS03435 -2.4 -2.9 ketol-acid reductoisomerase compare
MMP_RS05920 -2.4 -1.1 50S ribosomal protein L37e compare
MMP_RS01225 -2.3 -8.1 DUF5379 domain-containing protein compare
MMP_RS07695 -2.3 -9.2 DUF3236 domain-containing protein compare
MMP_RS07600 -2.3 -3.6 Ni-sirohydrochlorin a c-diamide synthase compare
MMP_RS00115 -2.3 -15.9 radical SAM protein compare
MMP_RS04710 -2.3 -1.9 hypothetical protein compare
MMP_RS01970 -2.3 -13.6 TIGR04279 domain-containing protein compare
MMP_RS06900 -2.3 -3.8 coenzyme F420-reducing hydrogenase FrhD protein compare
MMP_RS07750 -2.3 -5.7 DUF357 domain-containing protein compare
MMP_RS08600 -2.3 -4.0 flagellar protein D compare
MMP_RS02245 -2.2 -5.6 hypothetical protein compare
MMP_RS04585 -2.2 -12.3 AIR synthase related protein compare
MMP_RS05580 -2.2 -16.1 glycosyltransferase compare
MMP_RS06340 -2.2 -10.3 phosphoadenosine phosphosulfate reductase family protein compare
MMP_RS01920 -2.2 -16.1 glycosyltransferase family 2 protein compare
MMP_RS07135 -2.2 -11.2 coenzyme F420 hydrogenase subunit beta compare
MMP_RS06230 -2.2 -4.0 helix-turn-helix domain-containing protein compare
MMP_RS06285 -2.2 -2.3 precorrin-6Y C5 15-methyltransferase (decarboxylating) subunit CbiT compare
MMP_RS04620 -2.2 -13.3 cobalt transporter CbiM compare
MMP_RS03095 -2.2 -9.6 diphthine synthase compare
MMP_RS07525 -2.2 -8.7 4Fe-4S binding protein compare
MMP_RS00110 -2.1 -4.4 hypothetical protein compare
MMP_RS06395 -2.1 -4.3 ThiF family adenylyltransferase compare
MMP_RS03580 -2.1 -5.6 signal recognition particle-docking protein FtsY compare
MMP_RS07755 -2.1 -2.0 DUF555 domain-containing protein compare
MMP_RS07710 -2.1 -9.5 cell division protein FtsZ compare
MMP_RS07005 -2.1 -0.9 4Fe-4S binding protein compare
MMP_RS00985 -2.1 -6.8 CDC48 family AAA ATPase compare
MMP_RS04955 -2.1 -6.3 DNA topoisomerase I compare
MMP_RS05965 -2.1 -3.7 carboxymuconolactone decarboxylase family protein compare
MMP_RS06295 -2.1 -7.8 methanogenesis marker 14 protein compare
MMP_RS06270 -2.1 -7.3 TIGR00300 family protein compare
MMP_RS01195 -2.1 -1.6 metalloregulator ArsR/SmtB family transcription factor compare
MMP_RS07330 -2.1 -17.4 membrane protein compare
MMP_RS01975 -2.1 -16.0 hypothetical protein compare
MMP_RS06475 -2.1 -6.8 FAD-dependent oxidoreductase compare
MMP_RS01545 -2.0 -1.8 CBS domain-containing protein compare
MMP_RS07730 -2.0 -2.8 pyruvate synthase subunit beta compare
MMP_RS04685 -2.0 -5.1 DUF126 domain-containing protein compare
MMP_RS00750 -2.0 -3.3 fumarate hydratase compare
MMP_RS06020 -2.0 -5.7 archaeoflavoprotein AfpA compare
MMP_RS00685 -2.0 -5.2 2-phospho-L-lactate guanylyltransferase compare
MMP_RS01085 -2.0 -2.5 hypothetical protein compare
MMP_RS06975 -2.0 -3.0 sulfide-dependent adenosine diphosphate thiazole synthase compare
MMP_RS02345 -2.0 -3.4 GTP-dependent dephospho-CoA kinase family protein compare
MMP_RS03125 -1.9 -6.3 cell division ATPase MinD compare
MMP_RS07545 -1.9 -1.5 HTH domain-containing protein compare
MMP_RS06310 -1.9 -3.8 NAD(P)/FAD-dependent oxidoreductase compare
MMP_RS01755 -1.9 -1.7 DUF2097 domain-containing protein compare
MMP_RS00720 -1.9 -9.4 metal-dependent hydrolase compare
MMP_RS01840 -1.9 -9.3 TIGR00289 family protein compare
MMP_RS03445 -1.9 -1.4 methanogenesis marker 17 protein compare
MMP_RS05635 -1.9 -10.4 NAD-dependent epimerase/dehydratase family protein compare
MMP_RS02135 -1.9 -6.2 DUF5612 domain-containing protein compare
MMP_RS04775 -1.9 -5.8 adenosylhomocysteinase compare
MMP_RS06940 -1.9 -3.8 polyprenyl diphosphate synthase compare
MMP_RS01800 -1.9 -5.4 TIGR00303 family protein compare
MMP_RS05265 -1.9 -3.1 2-isopropylmalate synthase compare
MMP_RS00900 -1.9 -2.8 50S ribosomal protein L39e compare
MMP_RS03600 -1.9 -3.2 triose-phosphate isomerase compare
MMP_RS08590 -1.8 -5.9 flagellin compare
MMP_RS07425 -1.8 -5.4 GTP-binding protein compare
MMP_RS06035 -1.8 -9.5 glycosyltransferase family 2 protein compare
MMP_RS03390 -1.8 -7.9 malate dehydrogenase compare
MMP_RS06625 -1.8 -2.8 DNA primase compare
MMP_RS05540 -1.8 -3.5 hypothetical protein compare
MMP_RS05425 -1.8 -4.7 monovalent cation/H+ antiporter complex subunit F compare
MMP_RS00050 -1.8 -7.4 AarF/UbiB family protein compare
MMP_RS08595 -1.8 -1.5 flagellar protein C compare
MMP_RS04485 -1.8 -12.6 putative beta-lysine N-acetyltransferase compare
MMP_RS04500 -1.8 -13.8 adenosylmethionine--8-amino-7-oxononanoate transaminase compare
MMP_RS01385 -1.8 -0.9 imidazole glycerol phosphate synthase subunit HisH compare
MMP_RS07955 -1.8 -7.4 FumA C-terminus/TtdB family hydratase beta subunit compare
MMP_RS08940 -1.7 -1.6 MetS family NSS transporter small subunit compare
MMP_RS07445 -1.7 -4.5 helix-turn-helix domain-containing protein compare
MMP_RS02885 -1.7 -9.6 molybdopterin biosynthesis protein compare
MMP_RS07575 -1.7 -3.2 RNA ligase partner protein compare
MMP_RS07540 -1.7 -4.5 CBS domain-containing protein compare
MMP_RS07120 -1.7 -10.9 coenzyme F420 hydrogenase subunit alpha compare
MMP_RS08320 -1.7 -6.5 molybdopterin molybdotransferase MoeA compare
MMP_RS05930 -1.7 -3.4 3-isopropylmalate dehydratase large subunit compare
MMP_RS06685 -1.7 -12.2 formate dehydrogenase H subunit alpha selenocysteine-containing compare
MMP_RS00060 -1.7 -1.8 3-dehydroquinate synthase II compare
MMP_RS07130 -1.6 -9.7 coenzyme F420 hydrogenase subunit gamma compare
MMP_RS01045 -1.6 -7.5 diphthamide biosynthesis enzyme Dph2 compare
MMP_RS08635 -1.6 -2.4 UbiA family prenyltransferase compare
MMP_RS05845 -1.6 -2.3 tRNA-intron lyase compare
MMP_RS01795 -1.6 -2.3 methanogenesis marker 6 protein compare
MMP_RS06865 -1.6 -2.6 HypC/HybG/HupF family hydrogenase formation chaperone compare
MMP_RS07420 -1.6 -3.8 metalloregulator ArsR/SmtB family transcription factor compare
MMP_RS08070 -1.6 -7.7 DUF2096 domain-containing protein compare
MMP_RS01005 -1.6 -1.5 riboflavin synthase compare
MMP_RS07200 -1.6 -6.4 [5-(aminomethyl)furan-3-yl]methyl phosphate kinase compare
MMP_RS05345 -1.6 -8.5 hypothetical protein compare
MMP_RS09020 -1.6 -1.6 hypothetical protein compare
MMP_RS05295 -1.6 -10.4 minichromosome maintenance protein MCM compare
MMP_RS00250 -1.6 -12.3 Flp pilus assembly complex ATPase component TadA compare
MMP_RS00120 -1.5 -4.8 LysR family transcriptional regulator compare
MMP_RS08605 -1.5 -4.7 flagellar protein E compare
MMP_RS04780 -1.5 -2.6 ribonuclease P compare
MMP_RS08785 -1.5 -1.4 RNA-protein complex protein Nop10 compare


Specific Phenotypes

For 2 genes in this experiment