Experiment set9IT034 for Methanococcus maripaludis S2

Compare to:

H2 McCas with 20 minute oxygen exposure

200 most important genes:

  gene name fitness t score description  
MMP_RS02900 -5.3 -0.9 imidazoleglycerol-phosphate dehydratase HisB compare
MMP_RS01925 -4.6 -13.1 DUF1616 domain-containing protein compare
MMP_RS01885 -4.1 -13.4 Gfo/Idh/MocA family oxidoreductase compare
MMP_RS05550 -4.1 -1.0 cation:proton antiporter compare
MMP_RS05250 -4.1 -2.8 NFYB/HAP3 family transcription factor subunit compare
MMP_RS08715 -4.0 -2.5 formylmethanofuran dehydrogenase subunit B compare
MMP_RS07380 -4.0 -3.4 transcription elongation factor Spt5 compare
MMP_RS07390 -4.0 -3.8 cell division protein FtsZ compare
MMP_RS08720 -3.9 -2.3 4Fe-4S binding protein compare
MMP_RS01900 -3.9 -19.5 hypothetical protein compare
MMP_RS07075 -3.8 -6.3 phosphomannomutase/phosphoglucomutase compare
MMP_RS01875 -3.8 -13.7 N-acetyltransferase compare
MMP_RS06230 -3.7 -4.5 helix-turn-helix domain-containing protein compare
MMP_RS01385 -3.7 -0.9 imidazole glycerol phosphate synthase subunit HisH compare
MMP_RS03435 -3.7 -2.6 ketol-acid reductoisomerase compare
MMP_RS05555 -3.6 -1.8 DUF4040 domain-containing protein compare
MMP_RS01880 -3.6 -11.1 DegT/DnrJ/EryC1/StrS family aminotransferase compare
MMP_RS06625 -3.5 -2.9 DNA primase compare
MMP_RS06885 -3.5 -3.5 50S ribosome-binding GTPase compare
MMP_RS03960 -3.5 -1.5 hypothetical protein compare
MMP_RS00110 -3.5 -4.2 hypothetical protein compare
MMP_RS01960 -3.5 -1.5 hypothetical protein compare
MMP_RS02145 -3.4 -12.3 winged helix-turn-helix transcriptional regulator compare
MMP_RS03015 -3.4 -11.6 GTP 3' 8-cyclase MoaA compare
MMP_RS01905 -3.4 -19.5 glycosyltransferase compare
MMP_RS03640 -3.4 -5.3 archaeal proteasome endopeptidase complex subunit beta compare
MMP_RS06670 -3.3 -7.8 glucose-6-phosphate isomerase compare
MMP_RS06350 -3.3 -8.4 HesA/MoeB/ThiF family protein compare
MMP_RS01380 -3.2 -7.3 PHP domain-containing protein compare
MMP_RS05515 -3.2 -8.3 cyclic pyranopterin monophosphate synthase MoaC compare
MMP_RS00300 -3.1 -1.1 6 7-dimethyl-8-ribityllumazine synthase compare
MMP_RS03580 -3.1 -4.8 signal recognition particle-docking protein FtsY compare
MMP_RS01890 -3.1 -7.5 nucleotide sugar dehydrogenase compare
MMP_RS01175 -3.1 -4.7 triphosphoribosyl-dephospho-CoA synthase compare
MMP_RS03035 -3.1 -5.3 4-hydroxy-tetrahydrodipicolinate synthase compare
MMP_RS03315 -3.1 -1.4 ferrous iron transport protein A compare
MMP_RS04720 -3.1 -4.5 DedA family protein compare
MMP_RS01020 -3.0 -1.4 3 4-dihydroxy-2-butanone-4-phosphate synthase compare
MMP_RS02010 -3.0 -13.3 PHP domain-containing protein compare
MMP_RS08440 -3.0 -5.2 cell division protein SepF compare
MMP_RS06725 -3.0 -14.0 hypothetical protein compare
MMP_RS03025 -3.0 -7.1 molybdenum cofactor guanylyltransferase compare
MMP_RS00515 -3.0 -1.5 DUF655 domain-containing protein compare
MMP_RS02195 -3.0 -5.7 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase compare
MMP_RS00695 -3.0 -1.3 biotin--[acetyl-CoA-carboxylase] ligase compare
MMP_RS01265 -3.0 -4.2 hypothetical protein compare
MMP_RS06120 -3.0 -3.4 UPF0147 family protein compare
MMP_RS05920 -3.0 -1.1 50S ribosomal protein L37e compare
MMP_RS04090 -3.0 -3.8 hypothetical protein compare
MMP_RS06630 -3.0 -1.5 UPF0058 family protein compare
MMP_RS08635 -2.9 -2.9 UbiA family prenyltransferase compare
MMP_RS01500 -2.9 -3.7 CBS domain-containing protein compare
MMP_RS09020 -2.9 -2.6 hypothetical protein compare
MMP_RS07635 -2.9 -10.3 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMP_RS00895 -2.9 -5.5 hypothetical protein compare
MMP_RS08820 -2.9 -7.6 hypothetical protein compare
MMP_RS08745 -2.8 -8.5 CDP-2 3-bis-(O-geranylgeranyl)-sn-glycerol synthase compare
MMP_RS07755 -2.8 -1.6 DUF555 domain-containing protein compare
MMP_RS07605 -2.8 -6.2 diadenylate cyclase compare
MMP_RS04890 -2.8 -1.6 adenylyltransferase/cytidyltransferase family protein compare
MMP_RS01830 -2.8 -2.2 tRNA-Val compare
MMP_RS06980 -2.8 -9.2 tRNA 2-thiocytidine biosynthesis TtcA family protein compare
MMP_RS02800 -2.8 -10.5 nucleotidyltransferase domain-containing protein compare
MMP_RS03700 -2.8 -11.6 sodium:proton antiporter compare
MMP_RS08435 -2.7 -3.0 Era-like GTP-binding protein compare
MMP_RS06895 -2.7 -1.9 selenocysteine-specific translation elongation factor compare
MMP_RS08790 -2.7 -2.9 translation initiation factor IF-2 subunit alpha compare
MMP_RS06340 -2.7 -8.5 phosphoadenosine phosphosulfate reductase family protein compare
MMP_RS01220 -2.7 -9.9 hypothetical protein compare
MMP_RS03445 -2.7 -1.4 methanogenesis marker 17 protein compare
MMP_RS06355 -2.7 -3.2 molybdenum cofactor biosynthesis protein MoaE compare
MMP_RS01910 -2.7 -14.4 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
MMP_RS03400 -2.7 -4.2 archease compare
MMP_RS02875 -2.7 -10.7 chorismate pyruvate-lyase family protein compare
MMP_RS01725 -2.7 -4.2 class I SAM-dependent methyltransferase family protein compare
MMP_RS07580 -2.6 -4.5 DUF356 domain-containing protein compare
MMP_RS05265 -2.6 -3.3 2-isopropylmalate synthase compare
MMP_RS04585 -2.6 -13.1 AIR synthase related protein compare
MMP_RS05640 -2.6 -8.9 UTP--glucose-1-phosphate uridylyltransferase GalU compare
MMP_RS00810 -2.6 -10.6 topoisomerase DNA-binding C4 zinc finger domain-containing protein compare
MMP_RS07845 -2.6 -2.4 LL-diaminopimelate aminotransferase compare
MMP_RS05930 -2.6 -2.9 3-isopropylmalate dehydratase large subunit compare
MMP_RS01325 -2.6 -3.1 dihydroneopterin aldolase family protein compare
MMP_RS04775 -2.6 -5.3 adenosylhomocysteinase compare
MMP_RS00315 -2.5 -7.7 Nif3-like dinuclear metal center hexameric protein compare
MMP_RS01955 -2.5 -2.9 hypothetical protein compare
MMP_RS06840 -2.5 -1.0 DNA-directed RNA polymerase subunit N compare
MMP_RS00735 -2.5 -4.7 5 10-methenyltetrahydromethanopterin hydrogenase compare
MMP_RS08460 -2.5 -2.8 proteasome-activating nucleotidase compare
MMP_RS08300 -2.5 -1.7 metal-sulfur cluster assembly factor compare
MMP_RS06105 -2.5 -8.9 hydrogenase maturation peptidase HycI compare
MMP_RS06315 -2.5 -1.4 cobalt-precorrin-7 (C(5))-methyltransferase compare
MMP_RS01795 -2.5 -2.0 methanogenesis marker 6 protein compare
MMP_RS01005 -2.5 -1.9 riboflavin synthase compare
MMP_RS04685 -2.5 -5.0 DUF126 domain-containing protein compare
MMP_RS03110 -2.5 -6.9 glycosyltransferase family 2 protein compare
MMP_RS01895 -2.5 -16.6 flippase compare
MMP_RS01915 -2.4 -14.6 DUF354 domain-containing protein compare
MMP_RS05580 -2.4 -16.6 glycosyltransferase compare
MMP_RS03095 -2.4 -8.9 diphthine synthase compare
MMP_RS07750 -2.4 -5.4 DUF357 domain-containing protein compare
MMP_RS01335 -2.4 -3.0 prefoldin subunit beta compare
MMP_RS02355 -2.4 -4.1 30S ribosomal protein S27ae compare
MMP_RS04955 -2.4 -7.8 DNA topoisomerase I compare
MMP_RS00900 -2.4 -2.8 50S ribosomal protein L39e compare
MMP_RS07575 -2.4 -5.0 RNA ligase partner protein compare
MMP_RS00040 -2.4 -5.4 TIGR03576 family pyridoxal phosphate-dependent enzyme compare
MMP_RS01365 -2.3 -3.3 archaeal proteasome endopeptidase complex subunit alpha compare
MMP_RS06975 -2.3 -3.0 sulfide-dependent adenosine diphosphate thiazole synthase compare
MMP_RS07135 -2.3 -10.1 coenzyme F420 hydrogenase subunit beta compare
MMP_RS07330 -2.3 -18.0 membrane protein compare
MMP_RS00685 -2.3 -3.5 2-phospho-L-lactate guanylyltransferase compare
MMP_RS01545 -2.3 -1.6 CBS domain-containing protein compare
MMP_RS07525 -2.3 -7.4 4Fe-4S binding protein compare
MMP_RS01225 -2.3 -5.4 DUF5379 domain-containing protein compare
MMP_RS04605 -2.3 -6.3 cobalt ECF transporter T component CbiQ compare
MMP_RS06295 -2.3 -6.9 methanogenesis marker 14 protein compare
MMP_RS06925 -2.3 -2.9 ribonuclease VapC4 compare
MMP_RS06035 -2.3 -13.1 glycosyltransferase family 2 protein compare
MMP_RS02135 -2.3 -5.9 DUF5612 domain-containing protein compare
MMP_RS05345 -2.2 -9.5 hypothetical protein compare
MMP_RS06270 -2.2 -7.3 TIGR00300 family protein compare
MMP_RS03600 -2.2 -3.0 triose-phosphate isomerase compare
MMP_RS08605 -2.2 -7.2 flagellar protein E compare
MMP_RS01840 -2.2 -9.8 TIGR00289 family protein compare
MMP_RS00115 -2.2 -14.7 radical SAM protein compare
MMP_RS00725 -2.2 -8.0 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdC compare
MMP_RS01610 -2.2 -4.7 hypothetical protein compare
MMP_RS02240 -2.2 -4.2 methanogenesis marker 7 protein compare
MMP_RS01755 -2.2 -1.8 DUF2097 domain-containing protein compare
MMP_RS04615 -2.1 -5.3 PDGLE domain-containing protein compare
MMP_RS05635 -2.1 -11.0 NAD-dependent epimerase/dehydratase family protein compare
MMP_RS08070 -2.1 -7.4 DUF2096 domain-containing protein compare
MMP_RS06475 -2.1 -5.9 FAD-dependent oxidoreductase compare
MMP_RS03475 -2.1 -0.9 hypothetical protein compare
MMP_RS04850 -2.1 -14.9 UPF0254 family protein compare
MMP_RS03390 -2.1 -8.6 malate dehydrogenase compare
MMP_RS07545 -2.1 -1.3 HTH domain-containing protein compare
MMP_RS03205 -2.1 -2.2 peptidyl-tRNA hydrolase Pth2 compare
MMP_RS07540 -2.0 -4.2 CBS domain-containing protein compare
MMP_RS05425 -2.0 -6.1 monovalent cation/H+ antiporter complex subunit F compare
MMP_RS02935 -2.0 -6.1 A24 family peptidase compare
MMP_RS00730 -2.0 -5.6 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdB compare
MMP_RS00120 -2.0 -5.6 LysR family transcriptional regulator compare
MMP_RS07200 -2.0 -6.8 [5-(aminomethyl)furan-3-yl]methyl phosphate kinase compare
MMP_RS06900 -2.0 -3.6 coenzyme F420-reducing hydrogenase FrhD protein compare
MMP_RS08590 -2.0 -5.4 flagellin compare
MMP_RS07730 -2.0 -2.2 pyruvate synthase subunit beta compare
MMP_RS02885 -2.0 -11.7 molybdopterin biosynthesis protein compare
MMP_RS02345 -1.9 -3.4 GTP-dependent dephospho-CoA kinase family protein compare
MMP_RS02340 -1.9 -2.1 DNA-directed RNA polymerase subunit E'' compare
MMP_RS05965 -1.9 -3.9 carboxymuconolactone decarboxylase family protein compare
MMP_RS07700 -1.9 -9.6 DUF1188 domain-containing protein compare
MMP_RS06940 -1.9 -3.1 polyprenyl diphosphate synthase compare
MMP_RS01800 -1.9 -4.0 TIGR00303 family protein compare
MMP_RS08210 -1.9 -2.2 phosphatidylglycerophosphatase A compare
MMP_RS07955 -1.8 -5.0 FumA C-terminus/TtdB family hydratase beta subunit compare
MMP_RS01970 -1.8 -11.1 TIGR04279 domain-containing protein compare
MMP_RS04780 -1.8 -3.8 ribonuclease P compare
MMP_RS06685 -1.8 -12.2 formate dehydrogenase H subunit alpha selenocysteine-containing compare
MMP_RS02190 -1.8 -3.8 sulfopyruvate decarboxylase subunit alpha compare
MMP_RS03125 -1.8 -4.3 cell division ATPase MinD compare
MMP_RS00985 -1.8 -5.5 CDC48 family AAA ATPase compare
MMP_RS05450 -1.8 -3.5 CoB--CoM heterodisulfide reductase subunit C compare
MMP_RS04710 -1.8 -2.3 hypothetical protein compare
MMP_RS07695 -1.8 -6.5 DUF3236 domain-containing protein compare
MMP_RS08320 -1.8 -5.7 molybdopterin molybdotransferase MoeA compare
MMP_RS01085 -1.8 -2.0 hypothetical protein compare
MMP_RS07005 -1.8 -0.7 4Fe-4S binding protein compare
MMP_RS09045 -1.8 -12.5 class III signal peptide-containing protein compare
MMP_RS02280 -1.7 -0.9 DUF211 domain-containing protein compare
MMP_RS00050 -1.7 -9.2 AarF/UbiB family protein compare
MMP_RS05540 -1.7 -3.4 hypothetical protein compare
MMP_RS00915 -1.7 -6.0 DUF116 domain-containing protein compare
MMP_RS06395 -1.7 -3.6 ThiF family adenylyltransferase compare
MMP_RS07130 -1.7 -9.7 coenzyme F420 hydrogenase subunit gamma compare
MMP_RS05845 -1.7 -2.0 tRNA-intron lyase compare
MMP_RS07445 -1.7 -5.4 helix-turn-helix domain-containing protein compare
MMP_RS01720 -1.7 -2.5 replication factor C large subunit compare
MMP_RS07120 -1.7 -10.7 coenzyme F420 hydrogenase subunit alpha compare
MMP_RS08650 -1.7 -3.4 glutamine--fructose-6-phosphate transaminase (isomerizing) compare
MMP_RS07425 -1.7 -6.9 GTP-binding protein compare
MMP_RS00250 -1.7 -12.6 Flp pilus assembly complex ATPase component TadA compare
MMP_RS05445 -1.7 -8.1 CoB--CoM heterodisulfide reductase subunit B compare
MMP_RS01920 -1.7 -12.0 glycosyltransferase family 2 protein compare
MMP_RS04620 -1.7 -11.0 cobalt transporter CbiM compare
MMP_RS08630 -1.6 -7.1 archaellar assembly protein FlaJ compare
MMP_RS06130 -1.6 -5.1 peptidylprolyl isomerase compare
MMP_RS08785 -1.6 -1.3 RNA-protein complex protein Nop10 compare
MMP_RS08330 -1.6 -5.6 NADH-quinone oxidoreductase subunit H compare
MMP_RS06285 -1.6 -2.1 precorrin-6Y C5 15-methyltransferase (decarboxylating) subunit CbiT compare
MMP_RS00305 -1.6 -2.3 phosphoribosyl-ATP diphosphatase compare
MMP_RS01270 -1.6 -11.0 prepilin peptidase compare
MMP_RS07710 -1.6 -6.4 cell division protein FtsZ compare
MMP_RS08600 -1.6 -2.4 flagellar protein D compare
MMP_RS04500 -1.6 -11.6 adenosylmethionine--8-amino-7-oxononanoate transaminase compare
MMP_RS00240 -1.6 -11.2 type II secretion system F family protein compare
MMP_RS06310 -1.6 -3.8 NAD(P)/FAD-dependent oxidoreductase compare
MMP_RS08660 -1.5 -8.4 DHH family phosphoesterase compare
MMP_RS06855 -1.5 -9.2 hypothetical protein compare


Specific Phenotypes

For 4 genes in this experiment