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Experiment set9IT034 for
Methanococcus maripaludis S2
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H2 McCas with 20 minute oxygen exposure
200 most detrimental genes:
gene
name
fitness
t score
description
MMP
_RS01570
+1.2
2.4
hypothetical protein
compare
MMP
_RS06325
+1.2
2.3
hypothetical protein
compare
MMP
_RS08725
+1.0
1.0
Ni/Fe hydrogenase subunit alpha
compare
MMP
_RS01100
+1.0
2.2
ABC transporter ATP-binding protein
compare
MMP
_RS07840
+1.0
2.2
ribonuclease III
compare
MMP
_RS06910
+0.9
4.9
RlmF-related methyltransferase
compare
MMP
_RS08265
+0.9
4.3
rubrerythrin
compare
MMP
_RS09025
+0.9
1.6
hypothetical protein
compare
MMP
_RS08700
+0.9
6.7
hypothetical protein
compare
MMP
_RS08455
+0.9
3.5
multiprotein bridging factor aMBF1
compare
MMP
_RS08310
+0.8
2.0
TMEM165/GDT1 family protein
compare
MMP
_RS07765
+0.8
3.2
sodium:alanine symporter family protein
compare
MMP
_RS08775
+0.8
3.2
methanogenesis marker 9 domain-containing protein
compare
MMP
_RS06335
+0.7
2.8
HAD family hydrolase
compare
MMP
_RS00395
+0.7
1.4
MGMT family protein
compare
MMP
_RS01580
+0.7
3.7
PQQ-binding-like beta-propeller repeat protein
compare
MMP
_RS08390
+0.7
2.3
DUF5400 domain-containing protein
compare
MMP
_RS06905
+0.7
2.0
hypothetical protein
compare
MMP
_RS01675
+0.7
1.4
hypothetical protein
compare
MMP
_RS00990
+0.7
1.8
hypothetical protein
compare
MMP
_RS08430
+0.7
2.6
HAD family hydrolase
compare
MMP
_RS08380
+0.7
4.4
phosphatase PAP2 family protein
compare
MMP
_RS08160
+0.7
4.0
EamA family transporter
compare
MMP
_RS09065
+0.7
4.8
hypothetical protein
compare
MMP
_RS07850
+0.6
2.0
prephenate dehydratase
compare
MMP
_RS07150
+0.6
2.7
MTH895/ArsE family thioredoxin-like protein
compare
MMP
_RS00655
+0.6
1.8
hypothetical protein
compare
MMP
_RS01650
+0.6
0.7
sulfurtransferase TusA family protein
compare
MMP
_RS08480
+0.6
3.4
molybdate ABC transporter substrate-binding protein
compare
MMP
_RS03875
+0.6
2.6
hypothetical protein
compare
MMP
_RS01420
+0.6
1.4
hypothetical protein
compare
MMP
_RS08315
+0.6
1.7
S-methyl-5-thioribose-1-phosphate isomerase
compare
MMP
_RS07985
+0.6
4.0
nitroreductase family protein
compare
MMP
_RS06540
+0.6
2.1
3-methyl-2-oxobutanoate dehydrogenase subunit VorB
compare
MMP
_RS08325
+0.6
3.7
hypothetical protein
compare
MMP
_RS08085
+0.6
4.5
hypothetical protein
compare
MMP
_RS06520
+0.6
1.6
DUF1786 domain-containing protein
compare
MMP
_RS07915
+0.6
1.7
DUF4870 domain-containing protein
compare
MMP
_RS06155
+0.6
1.5
DUF4186 domain-containing protein
compare
MMP
_RS00665
+0.6
1.7
hypothetical protein
compare
MMP
_RS07815
+0.6
0.9
DUF2120 domain-containing protein
compare
MMP
_RS08260
+0.6
3.2
DUF99 family protein
compare
MMP
_RS00295
+0.6
1.1
gamma carbonic anhydrase family protein
compare
MMP
_RS08640
+0.6
4.5
TIM barrel protein
compare
MMP
_RS08215
+0.6
2.1
DUF483 domain-containing protein
compare
MMP
_RS08705
+0.6
3.0
sulfopyruvate decarboxylase subunit beta
compare
MMP
_RS08835
+0.6
3.9
H(2)-dependent methylenetetrahydromethanopterin dehydrogenase-related protein
compare
MMP
_RS01630
+0.6
3.8
N-glycosylase/DNA lyase
compare
MMP
_RS08205
+0.6
3.3
stage II sporulation protein M
compare
MMP
_RS00675
+0.6
0.6
nitroreductase family protein
compare
MMP
_RS07100
+0.6
3.3
hypothetical protein
compare
MMP
_RS06875
+0.6
2.9
FAD-dependent oxidoreductase
compare
MMP
_RS07155
+0.6
2.4
MFS transporter
compare
MMP
_RS00155
+0.5
3.3
heavy metal-binding domain-containing protein
compare
MMP
_RS00545
+0.5
3.0
XRE family transcriptional regulator
compare
MMP
_RS08235
+0.5
2.8
hypothetical protein
compare
MMP
_RS07925
+0.5
1.9
haloacid dehalogenase
compare
MMP
_RS08575
+0.5
3.6
hypothetical protein
compare
MMP
_RS07770
+0.5
1.9
alanine racemase
compare
MMP
_RS09060
+0.5
3.7
hypothetical protein
compare
MMP
_RS07910
+0.5
1.7
NAD(P)H-hydrate dehydratase
compare
MMP
_RS03220
+0.5
1.4
RNA 2' 3'-cyclic phosphodiesterase
compare
MMP
_RS06165
+0.5
3.7
ABC transporter permease
compare
MMP
_RS08130
+0.5
3.3
IGHMBP2 family helicase
compare
MMP
_RS09035
+0.5
2.3
hypothetical protein
compare
MMP
_RS07095
+0.5
2.1
PspC domain-containing protein
compare
MMP
_RS00290
+0.5
2.7
hypothetical protein
compare
MMP
_RS08280
+0.5
1.6
proteasome assembly chaperone family protein
compare
MMP
_RS01115
+0.5
2.7
molybdopterin molybdotransferase MoeA
compare
MMP
_RS04145
+0.5
1.0
hypothetical protein
compare
MMP
_RS04100
+0.5
2.1
hypothetical protein
compare
MMP
_RS06190
+0.5
3.5
tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO
compare
MMP
_RS08470
+0.5
3.1
ATP-binding cassette domain-containing protein
compare
MMP
_RS05365
+0.5
1.0
23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH
compare
MMP
_RS07725
+0.5
1.5
4Fe-4S dicluster domain-containing protein
compare
MMP
_RS07860
+0.5
0.4
hypothetical protein
compare
MMP
_RS03965
+0.5
1.3
hypothetical protein
compare
MMP
_RS00400
+0.5
2.4
tributyrin esterase
compare
MMP
_RS08395
+0.5
1.8
DsrE family protein
compare
MMP
_RS06735
+0.5
1.3
class I SAM-dependent rRNA methyltransferase
compare
MMP
_RS07145
+0.5
3.0
AmmeMemoRadiSam system protein B
compare
MMP
_RS08415
+0.5
1.2
radical SAM protein
compare
MMP
_RS00950
+0.5
2.9
site-2 protease family protein
compare
MMP
_RS01455
+0.4
2.1
nickel pincer cofactor biosynthesis protein LarC
compare
MMP
_RS09030
+0.4
1.8
hypothetical protein
compare
MMP
_RS00430
+0.4
1.4
hypothetical protein
compare
MMP
_RS01055
+0.4
1.6
hypothetical protein
compare
MMP
_RS02605
+0.4
0.5
MotA/TolQ/ExbB proton channel family protein
compare
MMP
_RS02595
+0.4
0.7
putative zinc-binding protein
compare
MMP
_RS02315
+0.4
2.8
RimK family alpha-L-glutamate ligase
compare
MMP
_RS06320
+0.4
1.5
hypothetical protein
compare
MMP
_RS06305
+0.4
1.8
transporter substrate-binding domain-containing protein
compare
MMP
_RS01065
+0.4
3.0
alpha/beta hydrolase
compare
MMP
_RS06990
+0.4
1.3
CatB-related O-acetyltransferase
compare
MMP
_RS07590
+0.4
2.5
hypothetical protein
compare
MMP
_RS08490
+0.4
3.0
hypothetical protein
compare
MMP
_RS01150
+0.4
1.9
aldo/keto reductase
compare
MMP
_RS08250
+0.4
2.1
pyruvate kinase
compare
MMP
_RS08475
+0.4
2.1
ABC transporter permease
compare
MMP
_RS03215
+0.4
3.0
MBL fold metallo-hydrolase
compare
MMP
_RS00960
+0.4
1.5
iron export ABC transporter permease subunit FetB
compare
MMP
_RS06590
+0.4
0.9
GNAT family N-acetyltransferase
compare
MMP
_RS08485
+0.4
2.2
tungstate ABC transporter substrate-binding protein WtpA
compare
MMP
_RS00540
+0.4
1.6
PLP-dependent aminotransferase family protein
compare
MMP
_RS00670
+0.4
1.9
TIM barrel protein
compare
MMP
_RS07345
+0.4
1.3
glycine synthesis protein GlyXL
(from data)
compare
MMP
_RS00335
+0.4
1.4
5-amino-6-(D-ribitylamino)uracil--L-tyrosine 4-hydroxyphenyl transferase CofH
compare
MMP
_RS06745
+0.4
1.3
DUF2119 domain-containing protein
compare
MMP
_RS01855
+0.4
2.2
2-hydroxyacyl-CoA dehydratase family protein
compare
MMP
_RS01320
+0.4
1.2
hypothetical protein
compare
MMP
_RS07890
+0.4
1.0
OB-fold nucleic acid binding domain-containing protein
compare
MMP
_RS06375
+0.4
1.4
ATP-dependent sacrificial sulfur transferase LarE
compare
MMP
_RS08080
+0.4
2.0
YchF/TatD family DNA exonuclease
compare
MMP
_RS02720
+0.4
1.3
molybdate ABC transporter substrate-binding protein
compare
MMP
_RS06480
+0.4
2.3
ABC transporter substrate-binding protein
compare
MMP
_RS00345
+0.4
1.6
DUF2666 domain-containing protein
compare
MMP
_RS09050
+0.4
1.1
CAP domain-containing protein
compare
MMP
_RS02495
+0.4
1.2
hypothetical protein
compare
MMP
_RS07680
+0.4
1.9
DUF366 family protein
compare
MMP
_RS06965
+0.4
1.9
TIGR04014 family B12-binding domain/radical SAM domain-containing protein
compare
MMP
_RS08555
+0.4
0.9
hypothetical protein
compare
MMP
_RS00105
+0.4
2.0
hypothetical protein
compare
MMP
_RS06440
+0.4
2.2
CBS domain-containing protein
compare
MMP
_RS04205
+0.4
1.7
carboxymuconolactone decarboxylase family protein
compare
MMP
_RS06185
+0.4
2.1
thermonuclease family protein
compare
MMP
_RS05275
+0.4
2.3
AI-2E family transporter
compare
MMP
_RS04735
+0.4
1.7
tautomerase family protein
compare
MMP
_RS00705
+0.4
0.9
hypothetical protein
compare
MMP
_RS00085
+0.4
2.5
DNA cytosine methyltransferase
compare
MMP
_RS07885
+0.4
1.3
tripartite tricarboxylate transporter permease
compare
MMP
_RS08750
+0.4
0.6
hypothetical protein
compare
MMP
_RS00450
+0.4
0.7
4Fe-4S binding protein
compare
MMP
_RS00195
+0.4
3.1
DUF4013 domain-containing protein
compare
MMP
_RS03910
+0.4
1.0
hypothetical protein
compare
MMP
_RS06560
+0.4
1.8
hypothetical protein
compare
MMP
_RS08755
+0.4
2.4
sodium:solute symporter family protein
compare
MMP
_RS03340
+0.4
0.3
ABC transporter ATP-binding protein
compare
MMP
_RS08285
+0.3
1.9
serine/threonine protein kinase
compare
MMP
_RS06495
+0.3
1.4
YkgJ family cysteine cluster protein
compare
MMP
_RS07905
+0.3
1.4
DUF3343 domain-containing protein
compare
MMP
_RS06045
+0.3
1.9
DNA polymerase
compare
MMP
_RS03490
+0.3
0.7
DUF2115 domain-containing protein
compare
MMP
_RS02370
+0.3
1.1
NifB/NifX family molybdenum-iron cluster-binding protein
compare
MMP
_RS04030
+0.3
1.6
hypothetical protein
compare
MMP
_RS02510
+0.3
2.2
site-specific integrase
compare
MMP
_RS00795
+0.3
2.0
formate dehydrogenase H subunit alpha selenocysteine-containing
compare
MMP
_RS05660
+0.3
1.8
phosphate ABC transporter substrate-binding protein
compare
MMP
_RS07855
+0.3
1.5
class I SAM-dependent methyltransferase
compare
MMP
_RS08410
+0.3
1.0
DUF169 domain-containing protein
compare
MMP
_RS08240
+0.3
1.6
methanogenesis marker 16 metalloprotein
compare
MMP
_RS06150
+0.3
1.9
hypothetical protein
compare
MMP
_RS08370
+0.3
0.2
cation:proton antiporter subunit C
compare
MMP
_RS07805
+0.3
1.5
ABC transporter permease
compare
MMP
_RS06465
+0.3
2.0
NERD domain-containing protein
compare
MMP
_RS01965
+0.3
1.5
DUF1616 domain-containing protein
compare
MMP
_RS07140
+0.3
2.2
TIGR00341 family protein
compare
MMP
_RS01805
+0.3
0.9
NUDIX hydrolase
compare
MMP
_RS01160
+0.3
1.5
DMT family transporter
compare
MMP
_RS00660
+0.3
2.0
alkaline phosphatase family protein
compare
MMP
_RS01145
+0.3
1.8
ABC transporter ATP-binding protein
compare
MMP
_RS07715
+0.3
1.5
YfcE family phosphodiesterase
compare
MMP
_RS01475
+0.3
1.7
phosphosulfolactate synthase
compare
MMP
_RS01435
+0.3
1.0
DMT family transporter
compare
MMP
_RS06570
+0.3
0.7
DUF190 domain-containing protein
compare
MMP
_RS08245
+0.3
1.6
DUF4013 domain-containing protein
compare
MMP
_RS01640
+0.3
1.4
2-oxoacid:acceptor oxidoreductase subunit alpha
compare
MMP
_RS03520
+0.3
0.5
YwbE family protein
compare
MMP
_RS06870
+0.3
1.4
DedA family protein
compare
MMP
_RS03715
+0.3
1.5
class III signal peptide-containing protein
compare
MMP
_RS03235
+0.3
1.3
tRNA pseudouridine(13) synthase TruD
compare
MMP
_RS02500
+0.3
1.4
minichromosome maintenance protein MCM
compare
MMP
_RS00650
+0.3
1.7
ABC transporter ATP-binding protein
compare
MMP
_RS02590
+0.3
1.5
low molecular weight phosphatase family protein
compare
MMP
_RS06500
+0.3
1.7
ATP-binding protein
compare
MMP
_RS03740
+0.3
1.1
indolepyruvate oxidoreductase subunit beta
compare
MMP
_RS01060
+0.3
1.4
calcium/sodium antiporter
compare
MMP
_RS00280
+0.3
1.8
DUF2118 domain-containing protein
compare
MMP
_RS01200
+0.3
1.3
hypothetical protein
compare
MMP
_RS02295
+0.3
1.5
TatD family hydrolase
compare
MMP
_RS08175
+0.3
1.5
7-cyano-7-deazaguanine synthase
compare
MMP
_RS02200
+0.3
2.0
methyl-accepting chemotaxis protein
compare
MMP
_RS06525
+0.3
0.4
YciI family protein
compare
MMP
_RS02045
+0.3
0.5
tRNA-Met
compare
MMP
_RS07620
+0.3
1.0
energy-coupling factor ABC transporter substrate-binding protein
compare
MMP
_RS02680
+0.3
1.2
ABC transporter permease
compare
MMP
_RS07775
+0.3
1.1
alanine dehydrogenase
compare
MMP
_RS06065
+0.3
2.0
iron ABC transporter substrate-binding protein
compare
MMP
_RS05715
+0.3
1.1
hypothetical protein
compare
MMP
_RS05470
+0.3
1.7
DUF523 and DUF1722 domain-containing protein
compare
MMP
_RS06080
+0.3
2.0
radical SAM protein
compare
MMP
_RS05720
+0.3
0.9
signal recognition particle subunit SRP19/SEC65 family protein
compare
MMP
_RS03450
+0.3
0.8
glycine synthesis protein GlyXS
(from data)
compare
MMP
_RS02415
+0.3
0.8
site-specific integrase
compare
MMP
_RS02675
+0.3
0.6
hypothetical protein
compare
MMP
_RS03890
+0.3
1.4
DUF2540 domain-containing protein
compare
MMP
_RS04040
+0.3
1.6
hypothetical protein
compare
MMP
_RS01635
+0.3
1.0
thiamine pyrophosphate-dependent enzyme
compare
MMP
_RS08945
+0.3
2.0
hypothetical protein
compare
MMP
_RS02300
+0.3
1.2
NAD(P)H-dependent oxidoreductase
compare
MMP
_RS07650
+0.3
1.7
TldD/PmbA family protein
compare
Specific Phenotypes
For 4 genes in this experiment