Experiment set9IT034 for Methanococcus maripaludis S2

Compare to:

H2 McCas with 20 minute oxygen exposure

200 most detrimental genes:

  gene name fitness t score description  
MMP_RS01570 +1.2 2.4 hypothetical protein compare
MMP_RS06325 +1.2 2.3 hypothetical protein compare
MMP_RS08725 +1.0 1.0 Ni/Fe hydrogenase subunit alpha compare
MMP_RS01100 +1.0 2.2 ABC transporter ATP-binding protein compare
MMP_RS07840 +1.0 2.2 ribonuclease III compare
MMP_RS06910 +0.9 4.9 RlmF-related methyltransferase compare
MMP_RS08265 +0.9 4.3 rubrerythrin compare
MMP_RS09025 +0.9 1.6 hypothetical protein compare
MMP_RS08700 +0.9 6.7 hypothetical protein compare
MMP_RS08455 +0.9 3.5 multiprotein bridging factor aMBF1 compare
MMP_RS08310 +0.8 2.0 TMEM165/GDT1 family protein compare
MMP_RS07765 +0.8 3.2 sodium:alanine symporter family protein compare
MMP_RS08775 +0.8 3.2 methanogenesis marker 9 domain-containing protein compare
MMP_RS06335 +0.7 2.8 HAD family hydrolase compare
MMP_RS00395 +0.7 1.4 MGMT family protein compare
MMP_RS01580 +0.7 3.7 PQQ-binding-like beta-propeller repeat protein compare
MMP_RS08390 +0.7 2.3 DUF5400 domain-containing protein compare
MMP_RS06905 +0.7 2.0 hypothetical protein compare
MMP_RS01675 +0.7 1.4 hypothetical protein compare
MMP_RS00990 +0.7 1.8 hypothetical protein compare
MMP_RS08430 +0.7 2.6 HAD family hydrolase compare
MMP_RS08380 +0.7 4.4 phosphatase PAP2 family protein compare
MMP_RS08160 +0.7 4.0 EamA family transporter compare
MMP_RS09065 +0.7 4.8 hypothetical protein compare
MMP_RS07850 +0.6 2.0 prephenate dehydratase compare
MMP_RS07150 +0.6 2.7 MTH895/ArsE family thioredoxin-like protein compare
MMP_RS00655 +0.6 1.8 hypothetical protein compare
MMP_RS01650 +0.6 0.7 sulfurtransferase TusA family protein compare
MMP_RS08480 +0.6 3.4 molybdate ABC transporter substrate-binding protein compare
MMP_RS03875 +0.6 2.6 hypothetical protein compare
MMP_RS01420 +0.6 1.4 hypothetical protein compare
MMP_RS08315 +0.6 1.7 S-methyl-5-thioribose-1-phosphate isomerase compare
MMP_RS07985 +0.6 4.0 nitroreductase family protein compare
MMP_RS06540 +0.6 2.1 3-methyl-2-oxobutanoate dehydrogenase subunit VorB compare
MMP_RS08325 +0.6 3.7 hypothetical protein compare
MMP_RS08085 +0.6 4.5 hypothetical protein compare
MMP_RS06520 +0.6 1.6 DUF1786 domain-containing protein compare
MMP_RS07915 +0.6 1.7 DUF4870 domain-containing protein compare
MMP_RS06155 +0.6 1.5 DUF4186 domain-containing protein compare
MMP_RS00665 +0.6 1.7 hypothetical protein compare
MMP_RS07815 +0.6 0.9 DUF2120 domain-containing protein compare
MMP_RS08260 +0.6 3.2 DUF99 family protein compare
MMP_RS00295 +0.6 1.1 gamma carbonic anhydrase family protein compare
MMP_RS08640 +0.6 4.5 TIM barrel protein compare
MMP_RS08215 +0.6 2.1 DUF483 domain-containing protein compare
MMP_RS08705 +0.6 3.0 sulfopyruvate decarboxylase subunit beta compare
MMP_RS08835 +0.6 3.9 H(2)-dependent methylenetetrahydromethanopterin dehydrogenase-related protein compare
MMP_RS01630 +0.6 3.8 N-glycosylase/DNA lyase compare
MMP_RS08205 +0.6 3.3 stage II sporulation protein M compare
MMP_RS00675 +0.6 0.6 nitroreductase family protein compare
MMP_RS07100 +0.6 3.3 hypothetical protein compare
MMP_RS06875 +0.6 2.9 FAD-dependent oxidoreductase compare
MMP_RS07155 +0.6 2.4 MFS transporter compare
MMP_RS00155 +0.5 3.3 heavy metal-binding domain-containing protein compare
MMP_RS00545 +0.5 3.0 XRE family transcriptional regulator compare
MMP_RS08235 +0.5 2.8 hypothetical protein compare
MMP_RS07925 +0.5 1.9 haloacid dehalogenase compare
MMP_RS08575 +0.5 3.6 hypothetical protein compare
MMP_RS07770 +0.5 1.9 alanine racemase compare
MMP_RS09060 +0.5 3.7 hypothetical protein compare
MMP_RS07910 +0.5 1.7 NAD(P)H-hydrate dehydratase compare
MMP_RS03220 +0.5 1.4 RNA 2' 3'-cyclic phosphodiesterase compare
MMP_RS06165 +0.5 3.7 ABC transporter permease compare
MMP_RS08130 +0.5 3.3 IGHMBP2 family helicase compare
MMP_RS09035 +0.5 2.3 hypothetical protein compare
MMP_RS07095 +0.5 2.1 PspC domain-containing protein compare
MMP_RS00290 +0.5 2.7 hypothetical protein compare
MMP_RS08280 +0.5 1.6 proteasome assembly chaperone family protein compare
MMP_RS01115 +0.5 2.7 molybdopterin molybdotransferase MoeA compare
MMP_RS04145 +0.5 1.0 hypothetical protein compare
MMP_RS04100 +0.5 2.1 hypothetical protein compare
MMP_RS06190 +0.5 3.5 tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO compare
MMP_RS08470 +0.5 3.1 ATP-binding cassette domain-containing protein compare
MMP_RS05365 +0.5 1.0 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH compare
MMP_RS07725 +0.5 1.5 4Fe-4S dicluster domain-containing protein compare
MMP_RS07860 +0.5 0.4 hypothetical protein compare
MMP_RS03965 +0.5 1.3 hypothetical protein compare
MMP_RS00400 +0.5 2.4 tributyrin esterase compare
MMP_RS08395 +0.5 1.8 DsrE family protein compare
MMP_RS06735 +0.5 1.3 class I SAM-dependent rRNA methyltransferase compare
MMP_RS07145 +0.5 3.0 AmmeMemoRadiSam system protein B compare
MMP_RS08415 +0.5 1.2 radical SAM protein compare
MMP_RS00950 +0.5 2.9 site-2 protease family protein compare
MMP_RS01455 +0.4 2.1 nickel pincer cofactor biosynthesis protein LarC compare
MMP_RS09030 +0.4 1.8 hypothetical protein compare
MMP_RS00430 +0.4 1.4 hypothetical protein compare
MMP_RS01055 +0.4 1.6 hypothetical protein compare
MMP_RS02605 +0.4 0.5 MotA/TolQ/ExbB proton channel family protein compare
MMP_RS02595 +0.4 0.7 putative zinc-binding protein compare
MMP_RS02315 +0.4 2.8 RimK family alpha-L-glutamate ligase compare
MMP_RS06320 +0.4 1.5 hypothetical protein compare
MMP_RS06305 +0.4 1.8 transporter substrate-binding domain-containing protein compare
MMP_RS01065 +0.4 3.0 alpha/beta hydrolase compare
MMP_RS06990 +0.4 1.3 CatB-related O-acetyltransferase compare
MMP_RS07590 +0.4 2.5 hypothetical protein compare
MMP_RS08490 +0.4 3.0 hypothetical protein compare
MMP_RS01150 +0.4 1.9 aldo/keto reductase compare
MMP_RS08250 +0.4 2.1 pyruvate kinase compare
MMP_RS08475 +0.4 2.1 ABC transporter permease compare
MMP_RS03215 +0.4 3.0 MBL fold metallo-hydrolase compare
MMP_RS00960 +0.4 1.5 iron export ABC transporter permease subunit FetB compare
MMP_RS06590 +0.4 0.9 GNAT family N-acetyltransferase compare
MMP_RS08485 +0.4 2.2 tungstate ABC transporter substrate-binding protein WtpA compare
MMP_RS00540 +0.4 1.6 PLP-dependent aminotransferase family protein compare
MMP_RS00670 +0.4 1.9 TIM barrel protein compare
MMP_RS07345 +0.4 1.3 glycine synthesis protein GlyXL (from data) compare
MMP_RS00335 +0.4 1.4 5-amino-6-(D-ribitylamino)uracil--L-tyrosine 4-hydroxyphenyl transferase CofH compare
MMP_RS06745 +0.4 1.3 DUF2119 domain-containing protein compare
MMP_RS01855 +0.4 2.2 2-hydroxyacyl-CoA dehydratase family protein compare
MMP_RS01320 +0.4 1.2 hypothetical protein compare
MMP_RS07890 +0.4 1.0 OB-fold nucleic acid binding domain-containing protein compare
MMP_RS06375 +0.4 1.4 ATP-dependent sacrificial sulfur transferase LarE compare
MMP_RS08080 +0.4 2.0 YchF/TatD family DNA exonuclease compare
MMP_RS02720 +0.4 1.3 molybdate ABC transporter substrate-binding protein compare
MMP_RS06480 +0.4 2.3 ABC transporter substrate-binding protein compare
MMP_RS00345 +0.4 1.6 DUF2666 domain-containing protein compare
MMP_RS09050 +0.4 1.1 CAP domain-containing protein compare
MMP_RS02495 +0.4 1.2 hypothetical protein compare
MMP_RS07680 +0.4 1.9 DUF366 family protein compare
MMP_RS06965 +0.4 1.9 TIGR04014 family B12-binding domain/radical SAM domain-containing protein compare
MMP_RS08555 +0.4 0.9 hypothetical protein compare
MMP_RS00105 +0.4 2.0 hypothetical protein compare
MMP_RS06440 +0.4 2.2 CBS domain-containing protein compare
MMP_RS04205 +0.4 1.7 carboxymuconolactone decarboxylase family protein compare
MMP_RS06185 +0.4 2.1 thermonuclease family protein compare
MMP_RS05275 +0.4 2.3 AI-2E family transporter compare
MMP_RS04735 +0.4 1.7 tautomerase family protein compare
MMP_RS00705 +0.4 0.9 hypothetical protein compare
MMP_RS00085 +0.4 2.5 DNA cytosine methyltransferase compare
MMP_RS07885 +0.4 1.3 tripartite tricarboxylate transporter permease compare
MMP_RS08750 +0.4 0.6 hypothetical protein compare
MMP_RS00450 +0.4 0.7 4Fe-4S binding protein compare
MMP_RS00195 +0.4 3.1 DUF4013 domain-containing protein compare
MMP_RS03910 +0.4 1.0 hypothetical protein compare
MMP_RS06560 +0.4 1.8 hypothetical protein compare
MMP_RS08755 +0.4 2.4 sodium:solute symporter family protein compare
MMP_RS03340 +0.4 0.3 ABC transporter ATP-binding protein compare
MMP_RS08285 +0.3 1.9 serine/threonine protein kinase compare
MMP_RS06495 +0.3 1.4 YkgJ family cysteine cluster protein compare
MMP_RS07905 +0.3 1.4 DUF3343 domain-containing protein compare
MMP_RS06045 +0.3 1.9 DNA polymerase compare
MMP_RS03490 +0.3 0.7 DUF2115 domain-containing protein compare
MMP_RS02370 +0.3 1.1 NifB/NifX family molybdenum-iron cluster-binding protein compare
MMP_RS04030 +0.3 1.6 hypothetical protein compare
MMP_RS02510 +0.3 2.2 site-specific integrase compare
MMP_RS00795 +0.3 2.0 formate dehydrogenase H subunit alpha selenocysteine-containing compare
MMP_RS05660 +0.3 1.8 phosphate ABC transporter substrate-binding protein compare
MMP_RS07855 +0.3 1.5 class I SAM-dependent methyltransferase compare
MMP_RS08410 +0.3 1.0 DUF169 domain-containing protein compare
MMP_RS08240 +0.3 1.6 methanogenesis marker 16 metalloprotein compare
MMP_RS06150 +0.3 1.9 hypothetical protein compare
MMP_RS08370 +0.3 0.2 cation:proton antiporter subunit C compare
MMP_RS07805 +0.3 1.5 ABC transporter permease compare
MMP_RS06465 +0.3 2.0 NERD domain-containing protein compare
MMP_RS01965 +0.3 1.5 DUF1616 domain-containing protein compare
MMP_RS07140 +0.3 2.2 TIGR00341 family protein compare
MMP_RS01805 +0.3 0.9 NUDIX hydrolase compare
MMP_RS01160 +0.3 1.5 DMT family transporter compare
MMP_RS00660 +0.3 2.0 alkaline phosphatase family protein compare
MMP_RS01145 +0.3 1.8 ABC transporter ATP-binding protein compare
MMP_RS07715 +0.3 1.5 YfcE family phosphodiesterase compare
MMP_RS01475 +0.3 1.7 phosphosulfolactate synthase compare
MMP_RS01435 +0.3 1.0 DMT family transporter compare
MMP_RS06570 +0.3 0.7 DUF190 domain-containing protein compare
MMP_RS08245 +0.3 1.6 DUF4013 domain-containing protein compare
MMP_RS01640 +0.3 1.4 2-oxoacid:acceptor oxidoreductase subunit alpha compare
MMP_RS03520 +0.3 0.5 YwbE family protein compare
MMP_RS06870 +0.3 1.4 DedA family protein compare
MMP_RS03715 +0.3 1.5 class III signal peptide-containing protein compare
MMP_RS03235 +0.3 1.3 tRNA pseudouridine(13) synthase TruD compare
MMP_RS02500 +0.3 1.4 minichromosome maintenance protein MCM compare
MMP_RS00650 +0.3 1.7 ABC transporter ATP-binding protein compare
MMP_RS02590 +0.3 1.5 low molecular weight phosphatase family protein compare
MMP_RS06500 +0.3 1.7 ATP-binding protein compare
MMP_RS03740 +0.3 1.1 indolepyruvate oxidoreductase subunit beta compare
MMP_RS01060 +0.3 1.4 calcium/sodium antiporter compare
MMP_RS00280 +0.3 1.8 DUF2118 domain-containing protein compare
MMP_RS01200 +0.3 1.3 hypothetical protein compare
MMP_RS02295 +0.3 1.5 TatD family hydrolase compare
MMP_RS08175 +0.3 1.5 7-cyano-7-deazaguanine synthase compare
MMP_RS02200 +0.3 2.0 methyl-accepting chemotaxis protein compare
MMP_RS06525 +0.3 0.4 YciI family protein compare
MMP_RS02045 +0.3 0.5 tRNA-Met compare
MMP_RS07620 +0.3 1.0 energy-coupling factor ABC transporter substrate-binding protein compare
MMP_RS02680 +0.3 1.2 ABC transporter permease compare
MMP_RS07775 +0.3 1.1 alanine dehydrogenase compare
MMP_RS06065 +0.3 2.0 iron ABC transporter substrate-binding protein compare
MMP_RS05715 +0.3 1.1 hypothetical protein compare
MMP_RS05470 +0.3 1.7 DUF523 and DUF1722 domain-containing protein compare
MMP_RS06080 +0.3 2.0 radical SAM protein compare
MMP_RS05720 +0.3 0.9 signal recognition particle subunit SRP19/SEC65 family protein compare
MMP_RS03450 +0.3 0.8 glycine synthesis protein GlyXS (from data) compare
MMP_RS02415 +0.3 0.8 site-specific integrase compare
MMP_RS02675 +0.3 0.6 hypothetical protein compare
MMP_RS03890 +0.3 1.4 DUF2540 domain-containing protein compare
MMP_RS04040 +0.3 1.6 hypothetical protein compare
MMP_RS01635 +0.3 1.0 thiamine pyrophosphate-dependent enzyme compare
MMP_RS08945 +0.3 2.0 hypothetical protein compare
MMP_RS02300 +0.3 1.2 NAD(P)H-dependent oxidoreductase compare
MMP_RS07650 +0.3 1.7 TldD/PmbA family protein compare


Specific Phenotypes

For 4 genes in this experiment