Experiment set9IT033 for Methanococcus maripaludis S2

Compare to:

H2 McCas with 5 minute oxygen exposure

200 most important genes:

  gene name fitness t score description  
MMP_RS07845 -6.0 -2.8 LL-diaminopimelate aminotransferase compare
MMP_RS03435 -4.0 -2.7 ketol-acid reductoisomerase compare
MMP_RS08300 -3.8 -1.6 metal-sulfur cluster assembly factor compare
MMP_RS02900 -3.8 -1.0 imidazoleglycerol-phosphate dehydratase HisB compare
MMP_RS06625 -3.7 -2.5 DNA primase compare
MMP_RS01385 -3.7 -1.0 imidazole glycerol phosphate synthase subunit HisH compare
MMP_RS01880 -3.7 -13.1 DegT/DnrJ/EryC1/StrS family aminotransferase compare
MMP_RS01885 -3.7 -13.6 Gfo/Idh/MocA family oxidoreductase compare
MMP_RS02145 -3.7 -8.6 winged helix-turn-helix transcriptional regulator compare
MMP_RS04720 -3.6 -5.0 DedA family protein compare
MMP_RS07005 -3.6 -0.9 4Fe-4S binding protein compare
MMP_RS01875 -3.6 -14.0 N-acetyltransferase compare
MMP_RS08435 -3.5 -3.7 Era-like GTP-binding protein compare
MMP_RS03600 -3.5 -3.8 triose-phosphate isomerase compare
MMP_RS01900 -3.4 -19.7 hypothetical protein compare
MMP_RS02355 -3.4 -3.9 30S ribosomal protein S27ae compare
MMP_RS03640 -3.4 -5.2 archaeal proteasome endopeptidase complex subunit beta compare
MMP_RS06900 -3.4 -3.5 coenzyme F420-reducing hydrogenase FrhD protein compare
MMP_RS03700 -3.4 -12.7 sodium:proton antiporter compare
MMP_RS03015 -3.3 -14.7 GTP 3' 8-cyclase MoaA compare
MMP_RS07755 -3.3 -1.9 DUF555 domain-containing protein compare
MMP_RS03960 -3.3 -1.6 hypothetical protein compare
MMP_RS01175 -3.2 -6.9 triphosphoribosyl-dephospho-CoA synthase compare
MMP_RS01005 -3.2 -1.9 riboflavin synthase compare
MMP_RS05515 -3.1 -11.0 cyclic pyranopterin monophosphate synthase MoaC compare
MMP_RS01925 -3.1 -10.8 DUF1616 domain-containing protein compare
MMP_RS04890 -3.1 -1.6 adenylyltransferase/cytidyltransferase family protein compare
MMP_RS01380 -3.1 -6.3 PHP domain-containing protein compare
MMP_RS03400 -3.0 -4.6 archease compare
MMP_RS08720 -3.0 -1.8 4Fe-4S binding protein compare
MMP_RS01905 -3.0 -15.5 glycosyltransferase compare
MMP_RS06670 -3.0 -6.8 glucose-6-phosphate isomerase compare
MMP_RS06895 -3.0 -2.3 selenocysteine-specific translation elongation factor compare
MMP_RS01265 -3.0 -5.1 hypothetical protein compare
MMP_RS06120 -3.0 -2.4 UPF0147 family protein compare
MMP_RS01890 -3.0 -5.9 nucleotide sugar dehydrogenase compare
MMP_RS05920 -3.0 -1.1 50S ribosomal protein L37e compare
MMP_RS07075 -2.9 -4.9 phosphomannomutase/phosphoglucomutase compare
MMP_RS06355 -2.9 -3.1 molybdenum cofactor biosynthesis protein MoaE compare
MMP_RS06725 -2.9 -15.7 hypothetical protein compare
MMP_RS00735 -2.9 -4.9 5 10-methenyltetrahydromethanopterin hydrogenase compare
MMP_RS06400 -2.9 -1.7 4Fe-4S binding protein compare
MMP_RS02010 -2.9 -13.9 PHP domain-containing protein compare
MMP_RS07605 -2.9 -5.2 diadenylate cyclase compare
MMP_RS00305 -2.9 -2.7 phosphoribosyl-ATP diphosphatase compare
MMP_RS09020 -2.9 -2.5 hypothetical protein compare
MMP_RS00895 -2.9 -4.1 hypothetical protein compare
MMP_RS01325 -2.8 -2.7 dihydroneopterin aldolase family protein compare
MMP_RS08745 -2.8 -8.5 CDP-2 3-bis-(O-geranylgeranyl)-sn-glycerol synthase compare
MMP_RS03580 -2.8 -5.7 signal recognition particle-docking protein FtsY compare
MMP_RS04685 -2.7 -4.4 DUF126 domain-containing protein compare
MMP_RS02875 -2.7 -11.6 chorismate pyruvate-lyase family protein compare
MMP_RS06980 -2.7 -9.4 tRNA 2-thiocytidine biosynthesis TtcA family protein compare
MMP_RS03035 -2.7 -5.6 4-hydroxy-tetrahydrodipicolinate synthase compare
MMP_RS06350 -2.7 -5.4 HesA/MoeB/ThiF family protein compare
MMP_RS00810 -2.7 -13.0 topoisomerase DNA-binding C4 zinc finger domain-containing protein compare
MMP_RS07635 -2.7 -8.2 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMP_RS08650 -2.6 -4.7 glutamine--fructose-6-phosphate transaminase (isomerizing) compare
MMP_RS03025 -2.6 -9.2 molybdenum cofactor guanylyltransferase compare
MMP_RS02800 -2.6 -7.1 nucleotidyltransferase domain-containing protein compare
MMP_RS01725 -2.6 -6.7 class I SAM-dependent methyltransferase family protein compare
MMP_RS01910 -2.6 -14.7 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
MMP_RS02240 -2.6 -5.0 methanogenesis marker 7 protein compare
MMP_RS08820 -2.6 -7.5 hypothetical protein compare
MMP_RS01610 -2.6 -4.9 hypothetical protein compare
MMP_RS08715 -2.5 -2.6 formylmethanofuran dehydrogenase subunit B compare
MMP_RS05845 -2.5 -2.1 tRNA-intron lyase compare
MMP_RS05550 -2.5 -1.0 cation:proton antiporter compare
MMP_RS01795 -2.5 -2.6 methanogenesis marker 6 protein compare
MMP_RS07750 -2.5 -5.7 DUF357 domain-containing protein compare
MMP_RS07390 -2.5 -3.9 cell division protein FtsZ compare
MMP_RS06925 -2.5 -3.3 ribonuclease VapC4 compare
MMP_RS06315 -2.5 -1.4 cobalt-precorrin-7 (C(5))-methyltransferase compare
MMP_RS01500 -2.5 -3.5 CBS domain-containing protein compare
MMP_RS04605 -2.5 -5.8 cobalt ECF transporter T component CbiQ compare
MMP_RS07730 -2.4 -2.7 pyruvate synthase subunit beta compare
MMP_RS00040 -2.4 -5.0 TIGR03576 family pyridoxal phosphate-dependent enzyme compare
MMP_RS04955 -2.4 -6.8 DNA topoisomerase I compare
MMP_RS07380 -2.4 -2.9 transcription elongation factor Spt5 compare
MMP_RS05640 -2.3 -7.1 UTP--glucose-1-phosphate uridylyltransferase GalU compare
MMP_RS01020 -2.3 -1.4 3 4-dihydroxy-2-butanone-4-phosphate synthase compare
MMP_RS00315 -2.3 -7.2 Nif3-like dinuclear metal center hexameric protein compare
MMP_RS05250 -2.3 -2.8 NFYB/HAP3 family transcription factor subunit compare
MMP_RS06020 -2.3 -5.6 archaeoflavoprotein AfpA compare
MMP_RS07600 -2.2 -3.3 Ni-sirohydrochlorin a c-diamide synthase compare
MMP_RS01225 -2.2 -6.5 DUF5379 domain-containing protein compare
MMP_RS07525 -2.2 -7.8 4Fe-4S binding protein compare
MMP_RS02195 -2.2 -5.9 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase compare
MMP_RS06105 -2.2 -9.3 hydrogenase maturation peptidase HycI compare
MMP_RS08600 -2.2 -3.0 flagellar protein D compare
MMP_RS06230 -2.2 -3.5 helix-turn-helix domain-containing protein compare
MMP_RS00900 -2.2 -2.5 50S ribosomal protein L39e compare
MMP_RS01220 -2.2 -8.6 hypothetical protein compare
MMP_RS07555 -2.2 -0.8 monovalent cation/H+ antiporter subunit E compare
MMP_RS02340 -2.2 -2.6 DNA-directed RNA polymerase subunit E'' compare
MMP_RS05265 -2.2 -2.8 2-isopropylmalate synthase compare
MMP_RS05580 -2.2 -15.5 glycosyltransferase compare
MMP_RS06295 -2.2 -7.3 methanogenesis marker 14 protein compare
MMP_RS04710 -2.2 -2.4 hypothetical protein compare
MMP_RS03205 -2.1 -2.3 peptidyl-tRNA hydrolase Pth2 compare
MMP_RS04850 -2.1 -15.0 UPF0254 family protein compare
MMP_RS07700 -2.1 -10.4 DUF1188 domain-containing protein compare
MMP_RS03095 -2.1 -8.6 diphthine synthase compare
MMP_RS04780 -2.1 -3.9 ribonuclease P compare
MMP_RS01800 -2.1 -5.0 TIGR00303 family protein compare
MMP_RS03390 -2.1 -7.6 malate dehydrogenase compare
MMP_RS06340 -2.1 -7.9 phosphoadenosine phosphosulfate reductase family protein compare
MMP_RS04585 -2.1 -10.4 AIR synthase related protein compare
MMP_RS06840 -2.0 -1.0 DNA-directed RNA polymerase subunit N compare
MMP_RS07540 -2.0 -4.8 CBS domain-containing protein compare
MMP_RS00515 -2.0 -1.7 DUF655 domain-containing protein compare
MMP_RS00725 -2.0 -6.5 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdC compare
MMP_RS04615 -2.0 -5.6 PDGLE domain-containing protein compare
MMP_RS06885 -2.0 -3.5 50S ribosome-binding GTPase compare
MMP_RS01915 -2.0 -12.2 DUF354 domain-containing protein compare
MMP_RS07735 -2.0 -1.1 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha compare
MMP_RS02345 -2.0 -4.2 GTP-dependent dephospho-CoA kinase family protein compare
MMP_RS00115 -2.0 -13.1 radical SAM protein compare
MMP_RS08790 -2.0 -1.7 translation initiation factor IF-2 subunit alpha compare
MMP_RS06730 -2.0 -2.5 phosphopantothenate/pantothenate synthetase compare
MMP_RS04775 -2.0 -4.5 adenosylhomocysteinase compare
MMP_RS03110 -2.0 -5.7 glycosyltransferase family 2 protein compare
MMP_RS00695 -2.0 -1.2 biotin--[acetyl-CoA-carboxylase] ligase compare
MMP_RS07200 -1.9 -6.5 [5-(aminomethyl)furan-3-yl]methyl phosphate kinase compare
MMP_RS01830 -1.9 -2.1 tRNA-Val compare
MMP_RS07695 -1.9 -5.0 DUF3236 domain-containing protein compare
MMP_RS06035 -1.9 -11.3 glycosyltransferase family 2 protein compare
MMP_RS07330 -1.9 -15.8 membrane protein compare
MMP_RS07580 -1.9 -3.5 DUF356 domain-containing protein compare
MMP_RS06270 -1.9 -6.4 TIGR00300 family protein compare
MMP_RS01335 -1.9 -2.9 prefoldin subunit beta compare
MMP_RS00110 -1.9 -4.4 hypothetical protein compare
MMP_RS02135 -1.9 -4.2 DUF5612 domain-containing protein compare
MMP_RS03475 -1.9 -0.9 hypothetical protein compare
MMP_RS02885 -1.9 -11.7 molybdopterin biosynthesis protein compare
MMP_RS05635 -1.8 -10.5 NAD-dependent epimerase/dehydratase family protein compare
MMP_RS04090 -1.8 -3.5 hypothetical protein compare
MMP_RS01895 -1.8 -10.8 flippase compare
MMP_RS01365 -1.8 -2.4 archaeal proteasome endopeptidase complex subunit alpha compare
MMP_RS00985 -1.8 -6.1 CDC48 family AAA ATPase compare
MMP_RS05925 -1.8 -4.6 small nuclear ribonucleoprotein compare
MMP_RS05555 -1.8 -1.4 DUF4040 domain-containing protein compare
MMP_RS01755 -1.8 -1.6 DUF2097 domain-containing protein compare
MMP_RS03445 -1.8 -1.2 methanogenesis marker 17 protein compare
MMP_RS04620 -1.8 -11.0 cobalt transporter CbiM compare
MMP_RS05345 -1.7 -7.3 hypothetical protein compare
MMP_RS05450 -1.7 -4.6 CoB--CoM heterodisulfide reductase subunit C compare
MMP_RS04870 -1.7 -5.6 TIGR02253 family HAD-type hydrolase compare
MMP_RS08070 -1.7 -7.8 DUF2096 domain-containing protein compare
MMP_RS06475 -1.7 -5.6 FAD-dependent oxidoreductase compare
MMP_RS08590 -1.7 -4.4 flagellin compare
MMP_RS02190 -1.7 -3.5 sulfopyruvate decarboxylase subunit alpha compare
MMP_RS06940 -1.7 -3.0 polyprenyl diphosphate synthase compare
MMP_RS02935 -1.7 -4.6 A24 family peptidase compare
MMP_RS07955 -1.7 -5.0 FumA C-terminus/TtdB family hydratase beta subunit compare
MMP_RS06685 -1.7 -11.2 formate dehydrogenase H subunit alpha selenocysteine-containing compare
MMP_RS01960 -1.7 -1.3 hypothetical protein compare
MMP_RS06130 -1.7 -4.9 peptidylprolyl isomerase compare
MMP_RS03125 -1.7 -6.8 cell division ATPase MinD compare
MMP_RS05930 -1.6 -2.3 3-isopropylmalate dehydratase large subunit compare
MMP_RS01840 -1.6 -6.5 TIGR00289 family protein compare
MMP_RS06110 -1.6 -3.5 ATP-dependent protease LonB compare
MMP_RS00050 -1.6 -8.0 AarF/UbiB family protein compare
MMP_RS03315 -1.6 -1.3 ferrous iron transport protein A compare
MMP_RS08605 -1.6 -5.3 flagellar protein E compare
MMP_RS09055 -1.6 -1.1 CAP domain-containing protein compare
MMP_RS07420 -1.6 -4.0 metalloregulator ArsR/SmtB family transcription factor compare
MMP_RS05525 -1.6 -6.0 calcium/sodium antiporter compare
MMP_RS04875 -1.6 -5.5 energy-converting hydrogenase B subunit P compare
MMP_RS05540 -1.6 -3.2 hypothetical protein compare
MMP_RS08320 -1.6 -5.3 molybdopterin molybdotransferase MoeA compare
MMP_RS00685 -1.6 -4.5 2-phospho-L-lactate guanylyltransferase compare
MMP_RS06630 -1.5 -1.1 UPF0058 family protein compare
MMP_RS00750 -1.5 -2.6 fumarate hydratase compare
MMP_RS06395 -1.5 -4.2 ThiF family adenylyltransferase compare
MMP_RS07135 -1.5 -8.8 coenzyme F420 hydrogenase subunit beta compare
MMP_RS00720 -1.5 -7.4 metal-dependent hydrolase compare
MMP_RS08635 -1.5 -1.8 UbiA family prenyltransferase compare
MMP_RS09045 -1.5 -11.6 class III signal peptide-containing protein compare
MMP_RS07575 -1.5 -3.2 RNA ligase partner protein compare
MMP_RS03145 -1.5 -4.5 fibrillarin-like rRNA/tRNA 2'-O-methyltransferase compare
MMP_RS06865 -1.5 -2.9 HypC/HybG/HupF family hydrogenase formation chaperone compare
MMP_RS00730 -1.5 -3.8 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdB compare
MMP_RS05445 -1.5 -7.4 CoB--CoM heterodisulfide reductase subunit B compare
MMP_RS06600 -1.5 -1.7 class III signal peptide-containing protein compare
MMP_RS06975 -1.5 -2.5 sulfide-dependent adenosine diphosphate thiazole synthase compare
MMP_RS01085 -1.5 -1.9 hypothetical protein compare
MMP_RS00915 -1.5 -6.1 DUF116 domain-containing protein compare
MMP_RS04500 -1.5 -11.1 adenosylmethionine--8-amino-7-oxononanoate transaminase compare
MMP_RS02280 -1.5 -0.8 DUF211 domain-containing protein compare
MMP_RS07425 -1.4 -5.9 GTP-binding protein compare
MMP_RS08440 -1.4 -1.8 cell division protein SepF compare
MMP_RS05500 -1.4 -6.8 2-isopropylmalate synthase compare
MMP_RS02245 -1.4 -3.5 hypothetical protein compare
MMP_RS01045 -1.4 -8.8 diphthamide biosynthesis enzyme Dph2 compare
MMP_RS07445 -1.4 -3.8 helix-turn-helix domain-containing protein compare
MMP_RS01270 -1.4 -11.0 prepilin peptidase compare
MMP_RS00300 -1.4 -0.9 6 7-dimethyl-8-ribityllumazine synthase compare
MMP_RS07130 -1.4 -7.1 coenzyme F420 hydrogenase subunit gamma compare
MMP_RS01720 -1.4 -2.0 replication factor C large subunit compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis S2 in stress experiments