Experiment set9IT029 for Pseudomonas syringae pv. syringae B728a

Compare to:

KB with Isoliquiritigenin 10 mM

200 most detrimental genes:

  gene name fitness t score description  
Psyr_2292 +1.5 2.9 L-glutaminase compare
Psyr_0857 +1.5 3.3 [SSU ribosomal protein S18P]-alanine acetyltransferase compare
Psyr_1832 +1.5 3.8 Exonuclease compare
Psyr_2501 +1.3 1.9 Hemerythrin compare
Psyr_3262 +1.2 1.9 dnaK suppressor protein, putative compare
Psyr_3611 +1.1 4.4 Protein of unknown function DUF815 compare
Psyr_0137 +1.1 0.8 outer membrane transport energization protein ExbD compare
Psyr_4077 +1.1 3.3 Methylated-DNA-[protein]-cysteine S-methyltransferase compare
Psyr_1875 +1.1 3.4 Enoyl-CoA hydratase/isomerase compare
Psyr_2808 +1.1 3.1 hypothetical protein compare
Psyr_1992 +1.1 2.4 Zinc-containing alcohol dehydrogenase superfamily compare
Psyr_2906 +1.1 1.7 Pilus retraction protein PilT compare
Psyr_2134 +1.0 1.9 protein of unknown function DUF903 compare
Psyr_2925 +1.0 2.6 Helix-turn-helix motif protein compare
Psyr_0248 +1.0 2.8 conserved hypothetical protein compare
Psyr_1844 +1.0 2.5 conserved hypothetical protein compare
Psyr_0447 +1.0 2.5 malonate decarboxylase subunit, putative compare
Psyr_1600 +0.9 2.0 Zinc-containing alcohol dehydrogenase superfamily compare
Psyr_1998 +0.9 1.6 lipoprotein, putative compare
Psyr_1402 +0.9 1.4 SlyX compare
Psyr_3083 +0.9 2.6 RND efflux system, outer membrane lipoprotein, NodT compare
Psyr_4224 +0.9 1.7 conserved hypothetical protein compare
Psyr_4596 +0.9 2.0 conserved hypothetical protein compare
Psyr_1212 +0.8 1.7 type III secretion protein HrpO compare
Psyr_5029 +0.8 1.2 Rubredoxin-type Fe(Cys)4 protein compare
Psyr_1202 +0.8 1.6 negative regulator of hrp expression HrpV compare
Psyr_3661 +0.8 2.4 Fumarate hydratase, class II compare
Psyr_2890 +0.8 1.8 amino acid ABC transporter ATP-binding protein, PAAT family compare
Psyr_0858 +0.8 2.4 conserved hypothetical protein compare
Psyr_0562 +0.8 2.8 OmpA/MotB compare
Psyr_1689 +0.8 2.4 conserved hypothetical protein compare
Psyr_3116 +0.8 2.2 transcriptional regulator, CdaR family compare
Psyr_2434 +0.8 2.7 Carbohydrate kinase, PfkB compare
Psyr_0252 +0.8 3.3 adenylate cyclase compare
Psyr_3632 +0.8 2.9 conserved hypothetical protein compare
Psyr_2713 +0.8 4.2 transcriptional regulator, LysR family compare
Psyr_3446 +0.8 0.9 Surface presentation of antigens (SPOA) protein compare
Psyr_1780 +0.7 1.9 transcriptional regulator, TetR family compare
Psyr_1881 +0.7 2.3 conserved hypothetical protein compare
Psyr_2984 +0.7 1.4 conserved hypothetical protein compare
Psyr_2520 +0.7 0.8 SOS-response transcriptional repressor, LexA compare
Psyr_3142 +0.7 1.3 general secretion pathway protein N, putative compare
Psyr_3255 +0.7 2.2 multisubunit potassium/proton antiporter, PhaE subunit compare
Psyr_2055 +0.7 2.9 Transglutaminase-like protein compare
Psyr_2807 +0.7 1.1 NinB compare
Psyr_4498 +0.7 1.0 outer membrane transport energization protein ExbD compare
Psyr_3028 +0.7 1.3 Protein of unknown function DUF28 compare
Psyr_2915 +0.7 1.6 transcriptional regulator, AraC family with amidase-like domain protein compare
Psyr_1947 +0.7 1.4 MbtH-like protein compare
Psyr_3458 +0.7 0.8 Flagellar hook-basal body complex protein FliE compare
Psyr_1629 +0.7 2.1 Glutathione S-transferase, N-terminal:Glutathione S-transferase, C-terminal compare
Psyr_1718 +0.7 1.3 von Willebrand factor, type A compare
Psyr_2787 +0.7 1.3 hypothetical protein compare
Psyr_3935 +0.7 2.0 Short-chain dehydrogenase/reductase SDR compare
Psyr_2478 +0.7 2.8 surface antigen (D15):Surface antigen variable number compare
Psyr_2388 +0.7 2.7 Twin-arginine translocation pathway signal compare
Psyr_3143 +0.7 1.2 general secretion pathway protein M, putative compare
Psyr_4754 +0.7 1.5 16S rRNA m(2)G-966 methyltransferase compare
Psyr_3830 +0.7 3.4 3-oxoacyl-[acyl-carrier protein] synthase compare
Psyr_2253 +0.7 1.7 Phosphonate metabolism compare
Psyr_4480 +0.7 1.0 outer membrane transport energization protein TonB compare
Psyr_4466 +0.7 1.9 Thioredoxin compare
Psyr_3660 +0.7 1.6 conserved hypothetical protein compare
Psyr_1937 +0.7 1.5 UspA compare
Psyr_1334 +0.7 2.3 Cysteine desulfuration protein SufE compare
Psyr_1067 +0.7 1.9 GTP cyclohydrolase subunit MoaC compare
Psyr_1039 +0.7 0.9 FecR protein compare
Psyr_0845 +0.7 1.7 conserved hypothetical protein compare
Psyr_3703 +0.7 1.8 Flavodoxin/nitric oxide synthase compare
Psyr_1687 +0.6 2.3 Rhomboid-like protein compare
Psyr_0840 +0.6 2.7 Pentapeptide repeat protein compare
Psyr_4920 +0.6 1.1 conserved hypothetical bacteriophage protein compare
Psyr_0843 +0.6 3.4 TPR repeat protein compare
Psyr_1802 +0.6 0.9 transcriptional regulator, AsnC family compare
Psyr_0435 +0.6 1.1 membrane protein, putative compare
Psyr_2243 +0.6 1.8 Endoribonuclease L-PSP compare
Psyr_3130 +0.6 1.7 Secretion protein HlyD compare
Psyr_2132 +0.6 1.5 shikimate dehydrogenase compare
Psyr_2317 +0.6 1.2 CDS compare
Psyr_3594 +0.6 1.7 membrane protein-like protein compare
Psyr_2418 +0.6 2.1 shikimate dehydrogenase compare
Psyr_3006 +0.6 2.2 Protein of unknown function DUF419 compare
Psyr_0153 +0.6 1.1 conserved hypothetical protein compare
Psyr_2140 +0.6 2.0 conserved hypothetical protein compare
Psyr_2100 +0.6 2.8 assimilatory nitrate reductase (NADH) beta subunit compare
Psyr_3211 +0.6 2.3 ATP-binding region, ATPase-like:Histidine kinase, HAMP region compare
Psyr_0907 +0.6 1.3 conserved hypothetical protein compare
Psyr_1888 +0.6 3.0 CDS compare
Psyr_2402 +0.6 1.5 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II compare
Psyr_3789 +0.6 2.4 lipoprotein, putative compare
Psyr_2734 +0.6 1.9 benzaldehyde dehydrogenase (NAD+) compare
Psyr_4155 +0.6 0.6 Protein of unknown function DUF615 compare
Psyr_0426 +0.6 0.9 lipoprotein, putative compare
Psyr_3280 +0.6 1.0 methylthioadenosine phosphorylase compare
Psyr_4463 +0.6 1.1 Protein of unknown function DUF193 compare
Psyr_2562 +0.6 1.4 hypothetical protein compare
Psyr_2350 +0.6 1.1 Protein of unknown function UPF0025 compare
Psyr_5036 +0.6 1.7 Response regulator receiver compare
Psyr_1554 +0.6 2.0 hypothetical protein compare
Psyr_0927 +0.6 1.6 hypothetical protein compare
Psyr_3001 +0.6 1.8 Glycosyl transferase, family 2 compare
Psyr_2201 +0.6 1.3 amino acid/amide ABC transporter ATP-binding protein 2, HAAT family compare
Psyr_2783 +0.6 1.9 conserved hypothetical protein compare
Psyr_1973 +0.6 1.5 Aspartate transaminase compare
Psyr_4487 +0.6 1.6 Carbohydrate kinase, PfkB compare
Psyr_2439 +0.6 2.3 mannitol ABC transporter membrane protein / sorbitol ABC transporter membrane protein compare
Psyr_0338 +0.6 1.4 ABC transporter compare
Psyr_0294 +0.6 2.3 Exopolyphosphatase compare
Psyr_3281 +0.6 1.2 Glycoside hydrolase, family 3, N-terminal compare
Psyr_0642 +0.6 1.5 conserved hypothetical protein compare
Psyr_0256 +0.6 1.8 Phenylacetic acid degradation-related protein compare
Psyr_4124 +0.6 2.5 conserved hypothetical protein compare
Psyr_2725 +0.6 2.4 Thiolase compare
Psyr_1975 +0.6 1.1 Integrase, catalytic region compare
Psyr_2219 +0.6 2.2 transcriptional regulator, LysR family compare
Psyr_3601 +0.6 0.7 conserved hypothetical protein compare
Psyr_4169 +0.6 1.1 4-carboxymuconolactone decarboxylase compare
Psyr_4579 +0.6 3.3 indole-3-glycerol phosphate synthase compare
Psyr_2870 +0.6 1.2 CDS compare
Psyr_2177 +0.6 1.8 probable sulfopyruvate decarboxylase compare
Psyr_3319 +0.6 2.1 ThiJ/PfpI compare
Psyr_2904 +0.5 2.8 Binding-protein-dependent transport systems inner membrane component compare
Psyr_3324 +0.5 2.4 transcriptional regulator, TetR family compare
Psyr_1210 +0.5 2.1 type III secretion protein HrcQa compare
Psyr_2618 +0.5 2.2 ABC transporter:Protein of unknown function DUF214 compare
Psyr_0283 +0.5 2.4 NLPA lipoprotein compare
Psyr_4571 +0.5 2.6 Protein of unknown function DUF805 compare
Psyr_5033 +0.5 2.9 PAS/PAC sensor signal transduction histidine kinase compare
Psyr_3104 +0.5 0.7 phosphate ABC transporter membrane protein 2, PhoT family compare
Psyr_3236 +0.5 2.1 transcriptional regulator, LysR family compare
Psyr_3152 +0.5 1.1 hypothetical protein compare
Psyr_3882 +0.5 0.5 conserved hypothetical protein compare
Psyr_3213 +0.5 1.3 Propeptide, PepSY amd peptidase M4 compare
Psyr_2765 +0.5 1.5 conserved domain protein compare
Psyr_0142 +0.5 1.9 ABC transporter compare
Psyr_3228 +0.5 1.6 Glycosyl transferase, group 1 compare
Psyr_3585 +0.5 1.4 Sua5/YciO/YrdC/YwlC compare
Psyr_4804 +0.5 1.4 conserved hypothetical protein compare
Psyr_1752 +0.5 1.8 transcriptional regulator, HxlR family compare
Psyr_1216 +0.5 2.7 type III secretion outer membrane protein PopN compare
Psyr_3662 +0.5 1.7 NAD(P)H dehydrogenase (quinone) compare
Psyr_0406 +0.5 1.3 Pilus assembly protein, PilQ compare
Psyr_2387 +0.5 1.6 Malate:quinone-oxidoreductase compare
Psyr_0645 +0.5 1.7 3-ketoacyl-CoA thiolase compare
Psyr_3034 +0.5 1.4 conserved hypothetical protein compare
Psyr_3693 +0.5 2.2 conserved hypothetical protein compare
Psyr_3723 +0.5 1.1 CDS compare
Psyr_3711 +0.5 2.0 Dienelactone hydrolase compare
Psyr_1547 +0.5 1.7 glycine cleavage system transcriptional repressor compare
Psyr_4160 +0.5 1.8 Maf-like protein compare
Psyr_3758 +0.5 2.3 Substrate-binding region of ABC-type glycine betaine transport system compare
Psyr_4157 +0.5 2.3 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase compare
Psyr_2941 +0.5 2.1 amino acid ABC transporter substrate-binding protein, PAAT family compare
Psyr_2860 +0.5 0.8 hypothetical protein compare
Psyr_4476 +0.5 2.2 dTDP-4-dehydrorhamnose reductase compare
Psyr_1272 +0.5 2.6 NUDIX hydrolase compare
Psyr_1277 +0.5 0.7 formate-dependent phosphoribosylglycinamide formyltransferase compare
Psyr_1273 +0.5 1.5 NUDIX hydrolase compare
Psyr_3865 +0.5 1.9 conserved hypothetical protein compare
Psyr_2442 +0.5 1.9 precorrin-6A synthase (deacetylating) compare
Psyr_1694 +0.5 1.4 Rhomboid-like protein compare
Psyr_3684 +0.5 0.8 NLP/P60 compare
Psyr_2275 +0.5 1.0 glutamate synthase (NADPH) GltB3 subunit compare
Psyr_2867 +0.5 1.5 ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal compare
Psyr_3004 +0.5 1.7 transcriptional regulator, LysR family compare
Psyr_3566 +0.5 1.4 transcriptional regulator, AraC family compare
Psyr_2962 +0.5 1.6 amino acid ABC transporter substrate-binding protein, PAAT family compare
Psyr_4494 +0.5 3.0 ABC-type phosphate/phosphonate transport system periplasmic component-like protein compare
Psyr_2014 +0.5 1.1 conserved hypothetical protein compare
Psyr_2919 +0.5 2.0 conserved hypothetical protein compare
Psyr_3018 +0.5 1.2 membrane protein, putative compare
Psyr_4161 +0.5 1.1 Rod shape-determining protein MreD compare
Psyr_2620 +0.5 1.0 RND efflux system, outer membrane lipoprotein, NodT compare
Psyr_0736 +0.5 1.2 umuC protein compare
Psyr_1695 +0.5 1.8 conserved hypothetical protein compare
Psyr_2302 +0.5 2.2 FAD linked oxidase, N-terminal compare
Psyr_2401 +0.5 1.5 extracellular solute-binding protein, family 1 compare
Psyr_1779 +0.5 1.3 hypothetical protein compare
Psyr_2046 +0.5 1.7 conserved hypothetical protein compare
Psyr_4605 +0.5 1.4 transcriptional regulator PrtN, putative compare
Psyr_4257 +0.5 1.1 Uncharacterized protein UPF0114 compare
Psyr_3748 +0.5 1.7 GCN5-related N-acetyltransferase compare
Psyr_4495 +0.5 2.3 Beta-lactamase compare
Psyr_2823 +0.4 0.6 hypothetical protein compare
Psyr_1769 +0.4 2.2 Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal compare
Psyr_1130 +0.4 1.3 conserved hypothetical protein compare
Psyr_3055 +0.4 1.3 Aminoglycoside phosphotransferase compare
Psyr_0440 +0.4 2.2 Cobyrinic acid a,c-diamide synthase compare
Psyr_1081 +0.4 2.7 conserved hypothetical protein compare
Psyr_3570 +0.4 1.5 L-ornithine ABC transporter membrane protein / L-arginine ABC transporter membrane protein compare
Psyr_0493 +0.4 1.0 CheW-like protein compare
Psyr_2486 +0.4 2.0 diguanylate cyclase/phosphodiesterase compare
Psyr_4591 +0.4 1.9 DNA circulation, N-terminal compare
Psyr_3790 +0.4 1.5 conserved hypothetical protein compare
Psyr_1953 +0.4 0.5 conserved hypothetical protein compare
Psyr_4995 +0.4 1.0 RHS protein compare
Psyr_1022 +0.4 0.7 conserved hypothetical protein compare
Psyr_4507 +0.4 2.8 Inositol monophosphatase compare
Psyr_3264 +0.4 2.3 monosaccharide ABC transporter ATP-binding protein, CUT2 family compare
Psyr_2647 +0.4 2.0 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Pseudomonas syringae pv. syringae B728a in stress experiments

For stress Isoliquiritigenin across organisms