Experiment set9IT026 for Pseudomonas syringae pv. syringae B728a

Compare to:

KB with Plumbagin 10 mM

200 most important genes:

  gene name fitness t score description  
Psyr_0303 -4.2 -5.3 Ferredoxin:Oxidoreductase FAD/NAD(P)-binding protein compare
Psyr_1544 -4.1 -5.6 SirA-like protein compare
Psyr_4203 -3.8 -3.7 SsrA-binding protein compare
Psyr_2591 -3.8 -6.7 transport system permease protein compare
Psyr_2593 -3.5 -4.1 ABC transporter compare
Psyr_1373 -3.5 -4.7 Peptidoglycan-binding LysM:Peptidase M23B compare
Psyr_0393 -3.5 -5.7 Protein of unknown function DUF971 compare
Psyr_2406 -3.4 -3.8 Flavin reductase-like protein compare
Psyr_4009 -3.3 -9.4 RND efflux system, outer membrane lipoprotein, NodT compare
Psyr_4340 -3.2 -10.7 phosphomethylpyrimidine kinase, putative compare
Psyr_4007 -3.2 -11.3 Secretion protein HlyD compare
Psyr_4008 -3.1 -18.2 Hydrophobe/amphiphile efflux-1 HAE1 compare
Psyr_4144 -3.1 -1.7 Protein of unknown function DUF1239 compare
Psyr_0835 -3.0 -6.8 transcriptional regulator, TraR/DksA family compare
Psyr_3691 -3.0 -9.0 conserved hypothetical protein compare
Psyr_0947 -3.0 -9.0 TPR repeat protein:TPR repeat protein compare
Psyr_4887 -3.0 -11.7 Peptidase S41A, C-terminal protease compare
Psyr_0951 -2.9 -4.6 UBA/THIF-type NAD/FAD binding fold:MoeZ/MoeB compare
Psyr_0535 -2.9 -4.7 toluene tolerance protein, putative compare
Psyr_4740 -2.9 -6.6 thiazole-phosphate synthase compare
Psyr_4683 -2.9 -6.1 dethiobiotin synthase compare
Psyr_4341 -2.8 -8.3 thiamine-phosphate diphosphorylase compare
Psyr_0033 -2.8 -3.3 tryptophan synthase, alpha chain compare
Psyr_0475 -2.8 -4.6 Protein of unknown function YGGT compare
Psyr_2913 -2.8 -7.8 transcriptional regulator, LysR family compare
Psyr_2921 -2.7 -2.4 ADP-ribosylglycohydrolase compare
Psyr_0034 -2.7 -4.8 tryptophan synthase, beta chain compare
Psyr_0603 -2.7 -7.7 N-acylglucosamine 2-epimerase compare
Psyr_4277 -2.6 -7.8 Oxidoreductase FAD/NAD(P)-binding:Oxidoreductase FAD-binding region compare
Psyr_3947 -2.6 -3.6 Methyltransferase, putative compare
Psyr_0202 -2.6 -8.9 transcriptional regulator, LysR family compare
Psyr_4684 -2.5 -4.4 biotin synthesis protein BioC compare
Psyr_1630 -2.4 -4.8 ABC transporter compare
Psyr_4687 -2.4 -10.4 biotin synthase compare
Psyr_4194 -2.4 -7.1 DnaJ central region:Heat shock protein DnaJ, N-terminal:Chaperone DnaJ, C-terminal compare
Psyr_0849 -2.4 -11.5 CDP-diacylglycerol--serine O-phosphatidyltransferase compare
Psyr_0454 -2.3 -6.4 adenosylmethionine-8-amino-7-oxononanoate aminotransferase apoenzyme compare
Psyr_3046 -2.2 -4.9 Protein of unknown function DUF330 compare
Psyr_0550 -2.2 -4.4 Protein of unknown function UPF0227 compare
Psyr_0281 -2.2 -4.1 ABC transporter compare
Psyr_4464 -2.2 -1.6 lipoprotein, putative compare
Psyr_4686 -2.2 -6.3 8-amino-7-oxononanoate synthase compare
Psyr_2733 -2.1 -3.3 Short-chain dehydrogenase/reductase SDR compare
Psyr_4091 -2.1 -4.3 8-oxo-dGTPase compare
Psyr_2594 -2.1 -1.8 unknown conserved protein in bacilli compare
Psyr_3043 -2.1 -3.0 Paraquat-inducible protein A compare
Psyr_2582 -2.1 -8.7 TonB-dependent siderophore receptor compare
Psyr_3290 -2.0 -3.0 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase compare
Psyr_2989 -2.0 -5.4 6-phosphogluconate dehydrogenase (decarboxylating) compare
Psyr_4991 -2.0 -2.8 hypothetical protein compare
Psyr_0383 -2.0 -1.2 Twin-arginine translocation protein TatB compare
Psyr_4519 -2.0 -5.6 General substrate transporter:Major facilitator superfamily compare
Psyr_2456 -2.0 -2.6 Short-chain dehydrogenase/reductase SDR compare
Psyr_3013 -2.0 -1.8 magnesium chelatase subunit ChlD compare
Psyr_3473 -1.9 -2.6 Flagellar P-ring protein compare
Psyr_1953 -1.9 -1.5 conserved hypothetical protein compare
Psyr_0487 -1.9 -3.2 glutathione synthase compare
Psyr_4139 -1.9 -5.5 Mce4/Rv3499c/MTV023.06c protein compare
Psyr_2592 -1.9 -4.1 transport system permease protein compare
Psyr_4774 -1.8 -1.2 Hypothetical protein compare
Psyr_0549 -1.8 -1.6 Metallophosphoesterase compare
Psyr_0885 -1.8 -1.9 conserved hypothetical protein compare
Psyr_0529 -1.8 -3.3 Glycosyl transferase, group 1 compare
Psyr_4151 -1.8 -1.5 Phosphocarrier HPr protein compare
Psyr_3419 -1.8 -5.3 4Fe-4S ferredoxin, iron-sulfur binding protein compare
Psyr_2256 -1.8 -3.6 ABC transporter compare
Psyr_0525 -1.8 -4.4 Lipopolysaccharide kinase compare
Psyr_1024 -1.8 -3.3 Flavodoxin/nitric oxide synthase compare
Psyr_2150 -1.8 -3.7 protein of unknown function DUF903 compare
Psyr_2383 -1.8 -3.7 Protein of unknown function DUF72 compare
Psyr_0259 -1.7 -3.1 Osmolarity sensor protein envZ compare
Psyr_3695 -1.7 -8.3 RelA/SpoT protein compare
Psyr_3600 -1.7 -2.4 transcriptional regulator, LysR family compare
Psyr_0830 -1.7 -5.7 Poly(A) polymerase compare
Psyr_4178 -1.7 -6.4 tRNA pseudouridine synthase B compare
Psyr_5135 -1.7 -0.7 Protein of unknown function DUF37 compare
Psyr_3886 -1.6 -1.8 methionyl-tRNA synthetase compare
Psyr_0402 -1.6 -11.0 Peptidoglycan glycosyltransferase compare
Psyr_1573 -1.6 -3.5 cyclic nucleotide-binding protein compare
Psyr_0831 -1.6 -2.7 Two-component response regulator CbrB compare
Psyr_2544 -1.6 -2.6 Alkylhydroperoxidase AhpD core:Uncharacterized peroxidase-related protein compare
Psyr_0282 -1.6 -4.0 Binding-protein-dependent transport systems inner membrane component compare
Psyr_2830 -1.6 -2.2 conserved hypothetical protein compare
Psyr_0215 -1.5 -6.4 Exodeoxyribonuclease III xth compare
Psyr_4138 -1.5 -2.8 Toluene tolerance compare
Psyr_2855 -1.5 -2.7 methionine synthase (B12-independent) compare
Psyr_3759 -1.5 -6.5 conserved hypothetical protein compare
Psyr_4278 -1.5 -2.5 regulatory protein, LuxR compare
Psyr_4912 -1.5 -5.7 amino acid ABC transporter substrate-binding protein, PAAT family compare
Psyr_2590 -1.5 -2.2 Periplasmic binding protein compare
Psyr_0772 -1.5 -3.5 Protein of unknown function DUF1355 compare
Psyr_2137 -1.5 -2.1 molybdopterin molybdochelatase compare
Psyr_1372 -1.5 -3.1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase compare
Psyr_4460 -1.5 -1.8 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II compare
Psyr_0574 -1.4 -4.0 protease FtsH subunit HflK compare
Psyr_3045 -1.4 -4.9 PqiB family protein compare
Psyr_4141 -1.4 -3.4 ABC transporter compare
Psyr_3055 -1.4 -2.1 Aminoglycoside phosphotransferase compare
Psyr_3112 -1.4 -5.7 Putative ammonia monooxygenase compare
Psyr_3841 -1.4 -1.4 conserved hypothetical protein compare
Psyr_3808 -1.4 -1.4 hypothetical protein compare
Psyr_2999 -1.4 -2.5 LmbE-like protein compare
Psyr_4465 -1.4 -1.3 conserved domain protein compare
Psyr_1268 -1.4 -5.1 extracellular solute-binding protein, family 3:SLT compare
Psyr_3854 -1.4 -1.0 OmpA/MotB compare
Psyr_0538 -1.4 -3.9 conserved hypothetical protein compare
Psyr_1487 -1.4 -1.7 conserved hypothetical protein compare
Psyr_1530 -1.3 -2.9 hypothetical protein compare
Psyr_1910 -1.3 -3.7 VacJ-like lipoprotein compare
Psyr_1707 -1.3 -2.4 transcriptional regulator, GntR family compare
Psyr_3146 -1.2 -1.5 general secretion pathway protein J, putative compare
Psyr_2968 -1.2 -6.9 Hydrophobe/amphiphile efflux-1 HAE1 compare
Psyr_2327 -1.2 -2.8 GTP cyclohydrolase subunit MoaA compare
Psyr_3665 -1.2 -4.0 conserved hypothetical protein compare
Psyr_5067 -1.2 -5.0 conserved hypothetical protein compare
Psyr_0571 -1.2 -3.0 tRNA isopentenyltransferase compare
Psyr_2474 -1.2 -2.8 Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region compare
Psyr_1424 -1.2 -1.9 Peptidase S24, S26A and S26B compare
Psyr_4895 -1.2 -1.6 conserved hypothetical protein compare
Psyr_4593 -1.2 -2.4 sigma factor domain protein compare
Psyr_2180 -1.2 -2.0 transcriptional regulator, LysR family compare
Psyr_1509 -1.2 -4.2 PilM protein, putative compare
Psyr_4879 -1.2 -2.4 hypothetical protein compare
Psyr_4786 -1.2 -1.2 hypothetical protein compare
Psyr_5102 -1.2 -1.7 ABC transporter compare
Psyr_1724 -1.2 -6.0 glutamate dehydrogenase (NAD) compare
Psyr_0579 -1.2 -6.9 RNAse R compare
Psyr_0575 -1.2 -2.1 protease FtsH subunit HflC compare
Psyr_0838 -1.2 -2.2 Rieske [2Fe-2S] region compare
Psyr_1138 -1.1 -1.0 GCN5-related N-acetyltransferase compare
Psyr_1816 -1.1 -2.6 transcriptional regulator, GntR family compare
Psyr_3462 -1.1 -2.0 conserved hypothetical protein compare
Psyr_3489 -1.1 -2.1 FlgN compare
Psyr_4254 -1.1 -1.2 conserved hypothetical protein compare
Psyr_2143 -1.1 -1.7 delta1-piperideine 2-carboxylate reductase compare
Psyr_2990 -1.1 -2.2 conserved hypothetical protein compare
Psyr_4089 -1.1 -4.1 PAS compare
Psyr_1725 -1.1 -1.6 Protein of unknown function DUF204 compare
Psyr_4043 -1.1 -2.3 hypothetical protein compare
Psyr_1650 -1.1 -2.7 aminodeoxychorismate lyase apoprotein compare
Psyr_3357 -1.1 -2.3 transcriptional regulator, LysR family compare
Psyr_4627 -1.1 -2.3 dimethyladenosine transferase compare
Psyr_2537 -1.1 -2.0 conserved hypothetical protein compare
Psyr_4788 -1.1 -1.3 lipoprotein, putative compare
Psyr_1119 -1.1 -5.0 Helix-turn-helix protein RpiR:Sugar isomerase (SIS) compare
Psyr_1236 -1.1 -0.9 transcriptional regulator, BadM/Rrf2 family compare
Psyr_0680 -1.1 -1.9 DNA helicase/exodeoxyribonuclease V, gamma subunit compare
Psyr_3842 -1.0 -4.2 SNF2-related:Helicase, C-terminal:Type III restriction enzyme, res subunit compare
Psyr_3427 -1.0 -1.4 conserved hypothetical protein compare
Psyr_3445 -1.0 -1.9 Flagellar biosynthesis protein, FliO compare
Psyr_0735 -1.0 -1.7 Peptidase S24, S26A and S26B compare
Psyr_1389 -1.0 -1.9 Protein of unknown function DUF1456 compare
Psyr_1378 -1.0 -1.5 RecA protein compare
Psyr_3958 -1.0 -4.9 RNA polymerase, sigma-24 subunit, RpoE compare
Psyr_1371 -1.0 -4.4 5'-nucleotidase / exopolyphosphatase / 3'-nucleotidase compare
Psyr_2790 -1.0 -2.6 conserved hypothetical protein compare
Psyr_0464 -1.0 -1.7 hypothetical protein compare
Psyr_4408 -1.0 -4.5 Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal:Histidine kinase:Histidine kinase compare
Psyr_3727 -1.0 -2.8 conserved hypothetical protein compare
Psyr_1270 -1.0 -1.1 conserved hypothetical protein compare
Psyr_1419 -1.0 -1.6 preQ(0) biosynthesis protein QueC compare
Psyr_1968 -1.0 -1.7 RND efflux system, outer membrane lipoprotein, NodT compare
Psyr_2312 -1.0 -1.0 Protein of unknown function DUF24 compare
Psyr_0490 -1.0 -2.8 CheW-like protein compare
Psyr_2967 -1.0 -2.8 Secretion protein HlyD compare
Psyr_2897 -1.0 -3.4 regulatory protein, LuxR:Response regulator receiver compare
Psyr_1631 -1.0 -5.4 ABC-2 compare
Psyr_2088 -1.0 -1.3 2-methylaconitate cis-trans isomerase compare
Psyr_3118 -1.0 -1.6 transcriptional regulator, GntR family compare
Psyr_2190 -0.9 -1.5 NADH:flavin oxidoreductase/NADH oxidase compare
Psyr_2487 -0.9 -2.2 Short-chain dehydrogenase/reductase SDR compare
Psyr_3932 -0.9 -1.5 Cobalamin synthesis protein/P47K:Cobalamin synthesis protein/P47K compare
Psyr_2077 -0.9 -3.0 regulatory protein, LysR:LysR, substrate-binding protein compare
Psyr_2531 -0.9 -2.2 transcriptional regulator, LysR family compare
Psyr_1930 -0.9 -2.3 hypothetical protein compare
Psyr_2752 -0.9 -1.5 conserved hypothetical protein compare
Psyr_2084 -0.9 -2.6 transcriptional regulator, GntR family compare
Psyr_3377 -0.9 -1.5 transcriptional regulator, MarR family compare
Psyr_2745 -0.9 -4.8 Pyridoxal-5'-phosphate-dependent enzyme, beta subunit:Ornithine cyclodeaminase/mu-crystallin compare
Psyr_1555 -0.9 -2.6 Cobyrinic acid a,c-diamide synthase compare
Psyr_3969 -0.9 -3.4 Putative ammonia monooxygenase compare
Psyr_2112 -0.9 -0.8 Protein with unknown function DUF469 compare
Psyr_2836 -0.9 -2.0 hypothetical protein compare
Psyr_0844 -0.9 -2.2 Protein of unknown function DUF446 compare
Psyr_1069 -0.9 -2.6 molybdopterin synthase subunit MoaE compare
Psyr_0395 -0.9 -1.2 HslV component of HslUV peptidase, Threonine peptidase, MEROPS family T01B compare
Psyr_4112 -0.9 -4.8 Protein of unknown function UPF0011 compare
Psyr_0785 -0.9 -1.8 Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer compare
Psyr_4140 -0.9 -1.6 Protein of unknown function DUF140 compare
Psyr_2930 -0.9 -1.5 Glyoxalase/bleomycin resistance protein/dioxygenase compare
Psyr_3791 -0.9 -2.2 Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal compare
Psyr_4143 -0.9 -1.3 HAD-superfamily hydrolase, subfamily IIIA:Phosphatase YrbI compare
Psyr_3450 -0.9 -2.5 Hpt compare
Psyr_3287 -0.9 -1.2 DNA topoisomerase I compare
Psyr_0784 -0.9 -1.2 CheW-like protein compare
Psyr_3867 -0.9 -0.8 hypothetical protein compare
Psyr_4113 -0.9 -4.0 LppC putative lipoprotein compare
Psyr_2300 -0.9 -2.5 Conserved hypothetical protein 374 compare
Psyr_2117 -0.9 -1.3 conserved hypothetical protein compare
Psyr_2743 -0.9 -2.0 Lysine exporter protein (LYSE/YGGA) compare


Specific Phenotypes

For 14 genes in this experiment

For stress Plumbagin in Pseudomonas syringae pv. syringae B728a

For stress Plumbagin across organisms