Experiment set9IT026 for Bacteroides thetaiotaomicron VPI-5482

Compare to:

BHIS with Cefoxitin sodium salt 0.025 mM

200 most important genes:

  gene name fitness t score description  
BT4028 -3.2 -0.9 hypothetical protein (NCBI ptt file) compare
BT3694 -2.8 -1.3 glycosyltransferase (NCBI ptt file) compare
BT0702 -2.4 -2.8 chloramphenicol acetyltransferase (CAT-III) (NCBI ptt file) compare
BT1375 -2.3 -8.8 aspartokinase (NCBI ptt file) compare
BT2122 -2.1 -1.0 lysyl-tRNA synthetase (NCBI ptt file) compare
BT2170 -2.1 -4.9 hypothetical protein (NCBI ptt file) compare
BT2843 -2.1 -3.3 integrase (NCBI ptt file) compare
BT0175 -2.1 -1.3 conserved hypothetical protein (NCBI ptt file) compare
BT4751 -2.0 -2.3 hypothetical protein (NCBI ptt file) compare
BT1991 -2.0 -2.1 N-acetylmuramoyl-L-alanine amidase (NCBI ptt file) compare
BT3481 -2.0 -1.5 putative glutaminase A (NCBI ptt file) compare
BT2173 -2.0 -5.5 hypothetical protein (NCBI ptt file) compare
BT2417 -1.9 -1.3 conserved hypothetical protein (NCBI ptt file) compare
BT0063 -1.9 -1.1 hypothetical protein (NCBI ptt file) compare
BT1262 -1.9 -1.0 putative transcriptional regulator (NCBI ptt file) compare
BT1071 -1.8 -2.3 hypothetical protein (NCBI ptt file) compare
BT0048 -1.8 -2.7 hypothetical protein (NCBI ptt file) compare
BT0378 -1.8 -1.7 capsular polysaccharide biosynthesis protein capD (NCBI ptt file) compare
BT1234 -1.8 -1.5 conserved hypothetical protein (NCBI ptt file) compare
BT3074 -1.8 -4.5 conserved hypothetical protein (NCBI ptt file) compare
BT1808 -1.8 -1.2 conserved hypothetical protein (NCBI ptt file) compare
BT1804 -1.7 -2.6 electron transfer flavoprotein beta-subunit (NCBI ptt file) compare
BT0085 -1.7 -1.8 conserved protein found in conjugate transposon (NCBI ptt file) compare
BT0122 -1.7 -4.0 3-oxoacyl-[acyl-carrier-protein] synthase III (NCBI ptt file) compare
BT2302 -1.7 -0.8 conserved protein found in conjugate transposon (NCBI ptt file) compare
BT3075 -1.7 -8.5 NAD-dependent epimerase/dehydratase family protein (NCBI ptt file) compare
BT2929 -1.7 -1.9 putative non-specific DNA-binding protein (NCBI ptt file) compare
BT0752 -1.7 -2.3 putative RNA polymerase ECF-type sigma factor (NCBI ptt file) compare
BT0115 -1.7 -2.5 arsenate reductase (NCBI ptt file) compare
BT1202 -1.7 -1.1 UDP-N-acetylglucosamine 2-epimerase (NCBI ptt file) compare
BT0740 -1.7 -0.9 flavoredoxin (NCBI ptt file) compare
BT1894 -1.6 -4.6 TPR-repeat-containing proteins (NCBI ptt file) compare
BT1080 -1.6 -1.3 hypothetical protein (NCBI ptt file) compare
BT0503 -1.6 -1.9 hypothetical protein (NCBI ptt file) compare
BT1805 -1.6 -1.9 electron transfer flavoprotein alpha-subunit (NCBI ptt file) compare
BT4034 -1.6 -2.3 hypothetical protein (NCBI ptt file) compare
BT0925 -1.6 -1.7 ABC transporter, ATP-binding protein (NCBI ptt file) compare
BT1854 -1.6 -1.5 putative membrane-associated phospholipid phosphatase (NCBI ptt file) compare
BT4562 -1.6 -0.9 hypothetical protein (NCBI ptt file) compare
BT2519 -1.6 -3.5 putative glycine cleavage system H protein (NCBI ptt file) compare
BT3996 -1.6 -5.1 putative peptidase (NCBI ptt file) compare
BT3783 -1.6 -2.9 conserved hypothetical protein (NCBI ptt file) compare
BT0087 -1.5 -1.6 conserved protein found in conjugate transposon (NCBI ptt file) compare
BT4326 -1.5 -2.6 ABC transporter ATP-binding protein (NCBI ptt file) compare
BT1958 -1.5 -1.3 hypothetical protein (NCBI ptt file) compare
BT0121 -1.5 -1.6 transcriptional regulator, ArsR family (NCBI ptt file) compare
BT1806 -1.5 -5.2 acyl-CoA dehydrogenase (NCBI ptt file) compare
BT1240 -1.5 -3.6 conserved hypothetical protein (NCBI ptt file) compare
BT0703 -1.5 -2.7 hypothetical protein (NCBI ptt file) compare
BT0827 -1.4 -1.7 hypothetical protein (NCBI ptt file) compare
BT4554 -1.4 -4.8 purine nucleoside phosphorylase II (NCBI ptt file) compare
BT3372 -1.4 -4.2 glycosyltransferase (NCBI ptt file) compare
BT1134 -1.4 -3.1 hypothetical protein (NCBI ptt file) compare
BT3284 -1.4 -2.3 conserved hypothetical protein (NCBI ptt file) compare
BT2960 -1.4 -2.3 hypothetical protein (NCBI ptt file) compare
BT1556 -1.4 -2.6 hypothetical protein (NCBI ptt file) compare
BT0548 -1.4 -1.3 diaminopimelate epimerase (NCBI ptt file) compare
BT2994 -1.4 -2.4 conserved hypothetical protein (NCBI ptt file) compare
BT4703 -1.4 -2.6 chloromuconate cycloisomerase (NCBI ptt file) compare
BT0321 -1.4 -1.6 cytidine/deoxycytidylate deaminase (NCBI ptt file) compare
BT3224 -1.4 -3.6 putative lysine decarboxylase (NCBI ptt file) compare
BT3337 -1.4 -5.5 RND efflux system, outer membrane component BipA (from data) compare
BT2155 -1.4 -3.7 hypothetical protein (NCBI ptt file) compare
BT2157 -1.4 -2.8 3-keto-alpha-glucoside 1,2-lyase; 3-ketoglucose dehydratase (from data) compare
BT2640 -1.3 -3.0 hypothetical protein (NCBI ptt file) compare
BT0880 -1.3 -1.3 hypothetical protein (NCBI ptt file) compare
BT0363 -1.3 -4.4 putative outer membrane protein (NCBI ptt file) compare
BT1912 -1.3 -1.1 hypothetical protein (NCBI ptt file) compare
BT1273 -1.3 -4.2 L-fucose isomerase (NCBI ptt file) compare
BT1576 -1.3 -1.2 conserved hypothetical protein, with a conserved domain (NCBI ptt file) compare
BT4777 -1.3 -2.1 hypothetical protein (NCBI ptt file) compare
BT1607 -1.3 -2.9 methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase (NCBI ptt file) compare
BT0937 -1.3 -1.1 hypothetical protein (NCBI ptt file) compare
BT1295 -1.3 -1.4 V-type sodium ATP synthase subunit K (NCBI ptt file) compare
BT4649 -1.3 -0.9 hypothetical protein (NCBI ptt file) compare
BT0323 -1.3 -1.7 hypothetical protein (NCBI ptt file) compare
BT0561 -1.3 -2.7 conserved hypothetical protein, putative membrane protein (NCBI ptt file) compare
BT0532 -1.3 -3.6 anthranilate synthase component I (NCBI ptt file) compare
BT3399 -1.3 -3.7 putative zinc protease (NCBI ptt file) compare
BT3338 -1.3 -8.8 RND efflux system, inner membrane component BipB (from data) compare
BT0197 -1.3 -2.5 hypothetical protein (NCBI ptt file) compare
BT4150 -1.3 -5.0 putative rhamnogalacturonan acetylesterase (NCBI ptt file) compare
p5482_02 -1.2 -4.1 hypothetical protein (NCBI) compare
BT0697 -1.2 -1.0 putative phosphatase/phosphohexomutase (NCBI ptt file) compare
BT0598 -1.2 -3.3 putative nucleoside-diphosphate sugar epimerases/dehydrase (NCBI ptt file) compare
BT3396 -1.2 -3.6 RNA polymerase ECF-type sigma factor (NCBI ptt file) compare
BT2172 -1.2 -6.3 putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) compare
BT0435 -1.2 -3.0 hypothetical protein (NCBI ptt file) compare
BT3810 -1.2 -3.0 putative endothelin-converting enzyme (NCBI ptt file) compare
BT3758 -1.2 -2.4 N-succinylornithine aminotransferase (EC 2.6.1.81) (from data) compare
BT0256 -1.2 -2.7 hypothetical protein (NCBI ptt file) compare
BT1312 -1.2 -2.1 serine protease precursor (NCBI ptt file) compare
BT1112 -1.2 -0.7 transposase (NCBI ptt file) compare
BT2645 -1.2 -3.0 hypothetical protein (NCBI ptt file) compare
BT3320 -1.2 -4.8 dihydrodipicolinate reductase (NCBI ptt file) compare
BT2100 -1.2 -1.6 putative ABC transporter, ATP-binding protein (NCBI ptt file) compare
BT4452 -1.2 -1.5 conserved hypothetical protein (NCBI ptt file) compare
BT1481 -1.2 -2.8 hypothetical protein (NCBI ptt file) compare
BT2088 -1.2 -1.3 hypothetical protein (NCBI ptt file) compare
BT0019 -1.2 -2.1 hypothetical protein (NCBI ptt file) compare
BT0820 -1.2 -2.3 conserved hypothetical protein (NCBI ptt file) compare
BT1564 -1.2 -1.2 conserved hypothetical protein (NCBI ptt file) compare
BT3211 -1.2 -1.0 conserved hypothetical protein (NCBI ptt file) compare
BT3325 -1.2 -4.7 hypothetical protein (NCBI ptt file) compare
BT1470 -1.2 -1.3 putative two-component system sensor histidine kinase (NCBI ptt file) compare
BT0046 -1.2 -3.0 putative glycosyltransferase (NCBI ptt file) compare
BT2932 -1.2 -1.7 transcriptional regulator (NCBI ptt file) compare
BT4515 -1.2 -1.8 hypothetical protein (NCBI ptt file) compare
BT3370 -1.2 -1.1 putative glycosyltransferase yibD (NCBI ptt file) compare
BT1575 -1.1 -1.3 putative dehydrogenase (NCBI ptt file) compare
BT4573 -1.1 -1.9 conserved hypothetical protein (NCBI ptt file) compare
BT0729 -1.1 -1.9 transcriptional regulator (NCBI ptt file) compare
BT4735 -1.1 -0.9 hypothetical protein (NCBI ptt file) compare
BT3220 -1.1 -6.1 TPR-repeat-containing protein (NCBI ptt file) compare
BT1104 -1.1 -0.4 small heat shock protein (NCBI ptt file) compare
BT3247 -1.1 -3.3 conserved hypothetical protein (NCBI ptt file) compare
BT4574 -1.1 -3.6 conserved hypothetical protein (NCBI ptt file) compare
BT3035 -1.1 -6.0 carboxy-terminal processing protease precursor (NCBI ptt file) compare
BT4219 -1.1 -2.2 hypothetical protein (NCBI ptt file) compare
BT0959 -1.1 -2.8 conserved hypothetical protein (NCBI ptt file) compare
BT0692 -1.1 -1.5 putative calcineurin superfamily phosphohydrolase (NCBI ptt file) compare
BT2470 -1.1 -2.1 hypothetical protein (NCBI ptt file) compare
BT1515 -1.1 -4.8 conserved hypothetical protein (NCBI ptt file) compare
BT2945 -1.1 -4.8 UDP-N-acetyl-D-mannosamine dehydrogenase (NCBI ptt file) compare
BT3368 -1.1 -1.1 putative glycosyltransferase (NCBI ptt file) compare
BT0877 -1.1 -1.3 ferredoxin domain containing protein (NCBI ptt file) compare
BT0704 -1.1 -0.9 phosphoribosylglycinamide formyltransferase 2 (NCBI ptt file) compare
BT0671 -1.1 -1.4 outer membrane protein TolC, putative (NCBI ptt file) compare
BT0799 -1.1 -1.2 hypothetical protein (NCBI ptt file) compare
BT1186 -1.1 -1.2 ABC transporter ATP-binding protein (NCBI ptt file) compare
BT0134 -1.1 -1.5 conserved hypothetical protein (NCBI ptt file) compare
BT2944 -1.1 -3.4 putative UDP-N-acetylglucosamine 2-epimerase (NCBI ptt file) compare
BT2693 -1.1 -4.4 formiminotransferase-cyclodeaminase (NCBI ptt file) compare
BT1077 -1.1 -2.6 putative aspartate aminotransferase (NCBI ptt file) compare
BT2169 -1.1 -2.3 RNA polymerase ECF-type sigma factor (NCBI ptt file) compare
BT0851 -1.1 -1.9 hypothetical protein (NCBI ptt file) compare
BT0201 -1.1 -2.7 histidinol dehydrogenase (NCBI ptt file) compare
BT3466 -1.1 -3.2 hypothetical protein (NCBI ptt file) compare
BT0735 -1.1 -2.4 aspartate decarboxylase AsdA (NCBI ptt file) compare
BT0020 -1.1 -3.3 hypothetical protein (NCBI ptt file) compare
BT4328 -1.1 -1.2 conserved hypothetical protein (NCBI ptt file) compare
BT0314 -1.1 -1.9 ribosomal protein L11 methyltransferase (NCBI ptt file) compare
BT1859 -1.0 -2.6 3-isopropylmalate dehydratase small subunit (NCBI ptt file) compare
BT1948 -1.0 -1.1 hypothetical protein (NCBI ptt file) compare
BT2612 -1.0 -2.4 hypothetical protein (NCBI ptt file) compare
BT2552 -1.0 -3.8 putative butyrate kinase (NCBI ptt file) compare
BT0786 -1.0 -2.0 putative integral membrane protein (NCBI ptt file) compare
BT0593 -1.0 -0.9 conserved hypothetical protein (NCBI ptt file) compare
BT3191 -1.0 -3.1 hypothetical protein (NCBI ptt file) compare
BT2309 -1.0 -2.5 hypothetical protein (NCBI ptt file) compare
BT2142 -1.0 -1.1 conserved hypothetical protein, with a conserved domain (NCBI ptt file) compare
BT3389 -1.0 -2.9 hypothetical protein (NCBI ptt file) compare
BT1979 -1.0 -2.0 Meso-diaminopimelate D-dehydrogenase (NCBI ptt file) compare
BT1600 -1.0 -2.7 BexA, membrane proein (NCBI ptt file) compare
BT4760 -1.0 -2.1 hypothetical protein (NCBI ptt file) compare
BT4503 -1.0 -1.4 conserved hypothetical protein (NCBI ptt file) compare
BT0560 -1.0 -1.3 outer membrane efflux protein (NCBI ptt file) compare
BT4644 -1.0 -2.2 putative anti-sigma factor (NCBI ptt file) compare
BT2418 -1.0 -2.3 hypothetical protein (NCBI ptt file) compare
BT1341 -1.0 -2.5 UDP-glucose 6-dehydrogenase (NCBI ptt file) compare
BT0223 -1.0 -1.7 two-component system response regulator (NCBI ptt file) compare
BT3427 -1.0 -3.8 conserved hypothetical protein (NCBI ptt file) compare
BT0934 -1.0 -1.1 hypothetical protein (NCBI ptt file) compare
BT1467 -1.0 -3.8 ABC transporter permease (NCBI ptt file) compare
BT4429 -1.0 -3.1 putative pteridine-dependent dioxygenase (NCBI ptt file) compare
BT1903 -1.0 -1.8 hypothetical protein (NCBI ptt file) compare
BT2647 -1.0 -3.0 hypothetical protein (NCBI ptt file) compare
BT0860 -1.0 -0.8 putative ABC transporter ATP-binding protein (NCBI ptt file) compare
BT4191 -1.0 -5.2 hypothetical protein (NCBI ptt file) compare
BT1520 -1.0 -1.4 putative transcriptional regulator (NCBI ptt file) compare
BT2974 -1.0 -0.9 hypothetical protein (NCBI ptt file) compare
BT0342 -1.0 -2.9 conserved hypothetical protein (NCBI ptt file) compare
BT1598 -1.0 -3.5 putative two-component system sensor histidine kinase (NCBI ptt file) compare
BT1125 -1.0 -1.6 hypothetical protein (NCBI ptt file) compare
BT0884 -1.0 -2.4 outer membrane efflux protein oprM precursor (NCBI ptt file) compare
BT4103 -1.0 -1.7 putative Sec-independent protein translocase (NCBI ptt file) compare
BT2320 -1.0 -3.8 transcription regulator (NCBI ptt file) compare
BT0511 -1.0 -2.0 hypothetical protein (NCBI ptt file) compare
BT4325 -1.0 -2.2 hypothetical protein (NCBI ptt file) compare
BT4765 -1.0 -2.5 conserved hypothetical protein (NCBI ptt file) compare
BT3980 -1.0 -0.9 hypothetical protein (NCBI ptt file) compare
BT4501 -1.0 -1.8 ribosomal large subunit pseudouridine synthase A (NCBI ptt file) compare
BT1478 -1.0 -2.7 putative histidinol-phosphatase (NCBI ptt file) compare
BT0320 -1.0 -1.5 hypothetical protein (NCBI ptt file) compare
BT2045 -1.0 -0.7 hypothetical protein (NCBI ptt file) compare
BT0055 -1.0 -2.2 putative glycosyltransferase (NCBI ptt file) compare
BT3811 -1.0 -3.3 putative endothelin-converting enzyme (NCBI ptt file) compare
BT0638 -1.0 -2.7 putative methionine aminopeptidase A (NCBI ptt file) compare
BT0930 -1.0 -1.5 hypothetical protein (NCBI ptt file) compare
BT0781 -1.0 -1.8 hypothetical protein (NCBI ptt file) compare
BT1594 -0.9 -1.9 putative ferredoxin (NCBI ptt file) compare
BT2696 -0.9 -1.8 hypothetical protein (NCBI ptt file) compare
BT4753 -0.9 -0.6 hypothetical protein (NCBI ptt file) compare
BT4214 -0.9 -4.1 conserved hypothetical protein (NCBI ptt file) compare
BT0028 -0.9 -1.5 alkaline phosphatase (NCBI ptt file) compare
BT1215 -0.9 -2.4 ABC transporter, permease protein (NCBI ptt file) compare
BT3339 -0.9 -4.6 RND efflux system, membrane fusion component BipC (from data) compare
BT4472 -0.9 -2.3 hypothetical protein (NCBI ptt file) compare
BT2586 -0.9 -1.9 hypothetical protein (NCBI ptt file) compare
BT0427 -0.9 -0.9 xanthine phosphoribosyltransferase (NCBI ptt file) compare


Specific Phenotypes

For 4 genes in this experiment

For stress Cefoxitin sodium salt in Bacteroides thetaiotaomicron VPI-5482

For stress Cefoxitin sodium salt across organisms