Experiment set9IT025 for Methanococcus maripaludis S2

Compare to:

H2 McCas with 1 mM (NH4)2S control

200 most important genes:

  gene name fitness t score description  
MMP_RS00110 -7.3 -4.5 hypothetical protein compare
MMP_RS01880 -4.9 -11.8 DegT/DnrJ/EryC1/StrS family aminotransferase compare
MMP_RS02145 -4.9 -13.3 winged helix-turn-helix transcriptional regulator compare
MMP_RS00300 -4.8 -1.2 6 7-dimethyl-8-ribityllumazine synthase compare
MMP_RS07750 -4.5 -7.5 DUF357 domain-containing protein compare
MMP_RS06350 -4.5 -8.4 HesA/MoeB/ThiF family protein compare
MMP_RS05250 -4.4 -2.9 NFYB/HAP3 family transcription factor subunit compare
MMP_RS01875 -4.4 -16.5 N-acetyltransferase compare
MMP_RS06670 -4.4 -9.0 glucose-6-phosphate isomerase compare
MMP_RS01175 -4.3 -6.0 triphosphoribosyl-dephospho-CoA synthase compare
MMP_RS05515 -4.3 -8.1 cyclic pyranopterin monophosphate synthase MoaC compare
MMP_RS06355 -4.3 -3.8 molybdenum cofactor biosynthesis protein MoaE compare
MMP_RS07845 -4.2 -2.9 LL-diaminopimelate aminotransferase compare
MMP_RS01885 -4.2 -15.2 Gfo/Idh/MocA family oxidoreductase compare
MMP_RS01900 -4.1 -21.4 hypothetical protein compare
MMP_RS01020 -4.1 -1.6 3 4-dihydroxy-2-butanone-4-phosphate synthase compare
MMP_RS01960 -4.1 -1.4 hypothetical protein compare
MMP_RS02900 -4.0 -1.0 imidazoleglycerol-phosphate dehydratase HisB compare
MMP_RS08435 -4.0 -4.1 Era-like GTP-binding protein compare
MMP_RS01925 -4.0 -15.7 DUF1616 domain-containing protein compare
MMP_RS03315 -3.9 -2.0 ferrous iron transport protein A compare
MMP_RS01325 -3.9 -2.7 dihydroneopterin aldolase family protein compare
MMP_RS06120 -3.9 -3.1 UPF0147 family protein compare
MMP_RS01890 -3.8 -8.0 nucleotide sugar dehydrogenase compare
MMP_RS03700 -3.8 -13.7 sodium:proton antiporter compare
MMP_RS03435 -3.8 -3.2 ketol-acid reductoisomerase compare
MMP_RS06285 -3.8 -3.2 precorrin-6Y C5 15-methyltransferase (decarboxylating) subunit CbiT compare
MMP_RS02195 -3.8 -6.5 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase compare
MMP_RS03015 -3.8 -13.7 GTP 3' 8-cyclase MoaA compare
MMP_RS03640 -3.7 -5.5 archaeal proteasome endopeptidase complex subunit beta compare
MMP_RS07635 -3.7 -11.0 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMP_RS08300 -3.6 -1.9 metal-sulfur cluster assembly factor compare
MMP_RS01955 -3.6 -5.7 hypothetical protein compare
MMP_RS06315 -3.5 -1.5 cobalt-precorrin-7 (C(5))-methyltransferase compare
MMP_RS03960 -3.5 -1.7 hypothetical protein compare
MMP_RS01905 -3.5 -20.6 glycosyltransferase compare
MMP_RS07605 -3.5 -6.9 diadenylate cyclase compare
MMP_RS01700 -3.5 -1.5 dihydroxy-acid dehydratase compare
MMP_RS07075 -3.5 -6.0 phosphomannomutase/phosphoglucomutase compare
MMP_RS08790 -3.5 -3.4 translation initiation factor IF-2 subunit alpha compare
MMP_RS01500 -3.5 -4.4 CBS domain-containing protein compare
MMP_RS05930 -3.5 -3.3 3-isopropylmalate dehydratase large subunit compare
MMP_RS01225 -3.4 -7.9 DUF5379 domain-containing protein compare
MMP_RS01755 -3.4 -2.0 DUF2097 domain-containing protein compare
MMP_RS02010 -3.4 -14.0 PHP domain-containing protein compare
MMP_RS04890 -3.4 -1.7 adenylyltransferase/cytidyltransferase family protein compare
MMP_RS07390 -3.4 -4.5 cell division protein FtsZ compare
MMP_RS00895 -3.3 -5.1 hypothetical protein compare
MMP_RS08635 -3.3 -2.9 UbiA family prenyltransferase compare
MMP_RS00810 -3.3 -12.4 topoisomerase DNA-binding C4 zinc finger domain-containing protein compare
MMP_RS00040 -3.2 -6.6 TIGR03576 family pyridoxal phosphate-dependent enzyme compare
MMP_RS01380 -3.2 -9.5 PHP domain-containing protein compare
MMP_RS02240 -3.2 -3.5 methanogenesis marker 7 protein compare
MMP_RS04090 -3.2 -4.5 hypothetical protein compare
MMP_RS06885 -3.2 -4.0 50S ribosome-binding GTPase compare
MMP_RS00515 -3.2 -2.0 DUF655 domain-containing protein compare
MMP_RS05640 -3.2 -9.6 UTP--glucose-1-phosphate uridylyltransferase GalU compare
MMP_RS05550 -3.1 -1.1 cation:proton antiporter compare
MMP_RS06900 -3.1 -3.9 coenzyme F420-reducing hydrogenase FrhD protein compare
MMP_RS03600 -3.1 -3.0 triose-phosphate isomerase compare
MMP_RS01265 -3.1 -4.7 hypothetical protein compare
MMP_RS08720 -3.1 -2.3 4Fe-4S binding protein compare
MMP_RS07380 -3.1 -3.7 transcription elongation factor Spt5 compare
MMP_RS08745 -3.1 -9.1 CDP-2 3-bis-(O-geranylgeranyl)-sn-glycerol synthase compare
MMP_RS01545 -3.0 -1.9 CBS domain-containing protein compare
MMP_RS01005 -3.0 -1.9 riboflavin synthase compare
MMP_RS06925 -3.0 -4.6 ribonuclease VapC4 compare
MMP_RS04685 -3.0 -5.2 DUF126 domain-containing protein compare
MMP_RS03035 -3.0 -5.7 4-hydroxy-tetrahydrodipicolinate synthase compare
MMP_RS05920 -2.9 -1.1 50S ribosomal protein L37e compare
MMP_RS03580 -2.9 -4.5 signal recognition particle-docking protein FtsY compare
MMP_RS04585 -2.9 -15.5 AIR synthase related protein compare
MMP_RS01895 -2.9 -20.5 flippase compare
MMP_RS06340 -2.9 -10.8 phosphoadenosine phosphosulfate reductase family protein compare
MMP_RS02875 -2.9 -12.6 chorismate pyruvate-lyase family protein compare
MMP_RS01610 -2.9 -4.9 hypothetical protein compare
MMP_RS06270 -2.9 -8.9 TIGR00300 family protein compare
MMP_RS04780 -2.8 -4.0 ribonuclease P compare
MMP_RS03400 -2.8 -3.3 archease compare
MMP_RS00115 -2.8 -16.8 radical SAM protein compare
MMP_RS08715 -2.8 -2.3 formylmethanofuran dehydrogenase subunit B compare
MMP_RS01725 -2.8 -6.8 class I SAM-dependent methyltransferase family protein compare
MMP_RS02345 -2.8 -5.1 GTP-dependent dephospho-CoA kinase family protein compare
MMP_RS00900 -2.8 -3.1 50S ribosomal protein L39e compare
MMP_RS01220 -2.8 -11.1 hypothetical protein compare
MMP_RS07005 -2.8 -1.0 4Fe-4S binding protein compare
MMP_RS06230 -2.8 -3.6 helix-turn-helix domain-containing protein compare
MMP_RS07755 -2.8 -2.0 DUF555 domain-containing protein compare
MMP_RS06625 -2.7 -2.7 DNA primase compare
MMP_RS08650 -2.7 -5.4 glutamine--fructose-6-phosphate transaminase (isomerizing) compare
MMP_RS04710 -2.7 -2.8 hypothetical protein compare
MMP_RS08440 -2.7 -3.8 cell division protein SepF compare
MMP_RS07735 -2.6 -1.3 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha compare
MMP_RS08820 -2.6 -6.9 hypothetical protein compare
MMP_RS03025 -2.6 -6.3 molybdenum cofactor guanylyltransferase compare
MMP_RS02800 -2.6 -5.9 nucleotidyltransferase domain-containing protein compare
MMP_RS05845 -2.6 -3.1 tRNA-intron lyase compare
MMP_RS04720 -2.6 -4.4 DedA family protein compare
MMP_RS01910 -2.6 -12.2 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
MMP_RS02280 -2.6 -1.1 DUF211 domain-containing protein compare
MMP_RS00725 -2.6 -7.7 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdC compare
MMP_RS06020 -2.6 -5.1 archaeoflavoprotein AfpA compare
MMP_RS05580 -2.6 -16.6 glycosyltransferase compare
MMP_RS04850 -2.6 -18.5 UPF0254 family protein compare
MMP_RS08595 -2.6 -1.8 flagellar protein C compare
MMP_RS06980 -2.5 -8.9 tRNA 2-thiocytidine biosynthesis TtcA family protein compare
MMP_RS06400 -2.5 -2.0 4Fe-4S binding protein compare
MMP_RS03110 -2.5 -9.6 glycosyltransferase family 2 protein compare
MMP_RS06475 -2.5 -6.7 FAD-dependent oxidoreductase compare
MMP_RS07575 -2.5 -4.6 RNA ligase partner protein compare
MMP_RS03095 -2.5 -8.0 diphthine synthase compare
MMP_RS04775 -2.5 -4.4 adenosylhomocysteinase compare
MMP_RS06395 -2.5 -4.8 ThiF family adenylyltransferase compare
MMP_RS04955 -2.5 -7.6 DNA topoisomerase I compare
MMP_RS07545 -2.4 -1.6 HTH domain-containing protein compare
MMP_RS06725 -2.4 -13.9 hypothetical protein compare
MMP_RS07330 -2.4 -19.5 membrane protein compare
MMP_RS05265 -2.4 -3.0 2-isopropylmalate synthase compare
MMP_RS00305 -2.4 -3.0 phosphoribosyl-ATP diphosphatase compare
MMP_RS01365 -2.3 -3.8 archaeal proteasome endopeptidase complex subunit alpha compare
MMP_RS00315 -2.3 -10.1 Nif3-like dinuclear metal center hexameric protein compare
MMP_RS09020 -2.3 -2.3 hypothetical protein compare
MMP_RS04615 -2.3 -3.9 PDGLE domain-containing protein compare
MMP_RS06630 -2.3 -1.7 UPF0058 family protein compare
MMP_RS06485 -2.3 -1.6 zinc ribbon domain-containing protein compare
MMP_RS03205 -2.3 -2.5 peptidyl-tRNA hydrolase Pth2 compare
MMP_RS06295 -2.3 -7.9 methanogenesis marker 14 protein compare
MMP_RS02355 -2.3 -3.5 30S ribosomal protein S27ae compare
MMP_RS03445 -2.3 -1.4 methanogenesis marker 17 protein compare
MMP_RS05345 -2.3 -10.1 hypothetical protein compare
MMP_RS05815 -2.3 -3.5 NOL1/NOP2/sun family putative RNA methylase compare
MMP_RS06975 -2.3 -3.3 sulfide-dependent adenosine diphosphate thiazole synthase compare
MMP_RS00685 -2.3 -6.0 2-phospho-L-lactate guanylyltransferase compare
MMP_RS07695 -2.3 -6.3 DUF3236 domain-containing protein compare
MMP_RS06105 -2.2 -10.9 hydrogenase maturation peptidase HycI compare
MMP_RS07200 -2.2 -6.9 [5-(aminomethyl)furan-3-yl]methyl phosphate kinase compare
MMP_RS07580 -2.2 -4.4 DUF356 domain-containing protein compare
MMP_RS00520 -2.2 -2.7 RNA polymerase Rpb4 family protein compare
MMP_RS05555 -2.2 -1.7 DUF4040 domain-containing protein compare
MMP_RS02135 -2.2 -5.3 DUF5612 domain-containing protein compare
MMP_RS05635 -2.2 -11.3 NAD-dependent epimerase/dehydratase family protein compare
MMP_RS06035 -2.2 -12.3 glycosyltransferase family 2 protein compare
MMP_RS03475 -2.2 -1.0 hypothetical protein compare
MMP_RS06895 -2.2 -2.4 selenocysteine-specific translation elongation factor compare
MMP_RS01840 -2.1 -9.8 TIGR00289 family protein compare
MMP_RS01385 -2.1 -1.0 imidazole glycerol phosphate synthase subunit HisH compare
MMP_RS07525 -2.1 -6.1 4Fe-4S binding protein compare
MMP_RS00735 -2.1 -5.2 5 10-methenyltetrahydromethanopterin hydrogenase compare
MMP_RS07700 -2.1 -12.6 DUF1188 domain-containing protein compare
MMP_RS05500 -2.1 -10.3 2-isopropylmalate synthase compare
MMP_RS01915 -2.1 -13.9 DUF354 domain-containing protein compare
MMP_RS04605 -2.1 -6.7 cobalt ECF transporter T component CbiQ compare
MMP_RS07875 -2.1 -6.2 hypothetical protein compare
MMP_RS00730 -2.1 -6.2 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdB compare
MMP_RS02340 -2.0 -1.7 DNA-directed RNA polymerase subunit E'' compare
MMP_RS01795 -2.0 -2.0 methanogenesis marker 6 protein compare
MMP_RS00985 -2.0 -8.5 CDC48 family AAA ATPase compare
MMP_RS01800 -2.0 -4.6 TIGR00303 family protein compare
MMP_RS02245 -2.0 -4.2 hypothetical protein compare
MMP_RS01335 -2.0 -3.4 prefoldin subunit beta compare
MMP_RS04500 -2.0 -14.6 adenosylmethionine--8-amino-7-oxononanoate transaminase compare
MMP_RS01720 -2.0 -2.2 replication factor C large subunit compare
MMP_RS01975 -2.0 -15.3 hypothetical protein compare
MMP_RS02190 -2.0 -3.2 sulfopyruvate decarboxylase subunit alpha compare
MMP_RS00750 -2.0 -2.9 fumarate hydratase compare
MMP_RS07420 -1.9 -4.8 metalloregulator ArsR/SmtB family transcription factor compare
MMP_RS08605 -1.9 -8.1 flagellar protein E compare
MMP_RS08460 -1.8 -3.4 proteasome-activating nucleotidase compare
MMP_RS06730 -1.8 -2.2 phosphopantothenate/pantothenate synthetase compare
MMP_RS06940 -1.8 -4.1 polyprenyl diphosphate synthase compare
MMP_RS01240 -1.8 -1.8 7-cyano-7-deazaguanine synthase QueC compare
MMP_RS05425 -1.8 -4.1 monovalent cation/H+ antiporter complex subunit F compare
MMP_RS07600 -1.8 -2.9 Ni-sirohydrochlorin a c-diamide synthase compare
MMP_RS08600 -1.7 -3.1 flagellar protein D compare
MMP_RS02930 -1.7 -3.8 class I SAM-dependent methyltransferase compare
MMP_RS01970 -1.7 -11.0 TIGR04279 domain-containing protein compare
MMP_RS04620 -1.7 -8.1 cobalt transporter CbiM compare
MMP_RS05245 -1.7 -7.2 archaeosine biosynthesis radical SAM protein RaSEA compare
MMP_RS07555 -1.7 -0.8 monovalent cation/H+ antiporter subunit E compare
MMP_RS05540 -1.7 -3.2 hypothetical protein compare
MMP_RS03390 -1.7 -8.6 malate dehydrogenase compare
MMP_RS05525 -1.7 -5.7 calcium/sodium antiporter compare
MMP_RS01830 -1.6 -2.1 tRNA-Val compare
MMP_RS02885 -1.6 -10.0 molybdopterin biosynthesis protein compare
MMP_RS08590 -1.6 -4.8 flagellin compare
MMP_RS08210 -1.6 -2.1 phosphatidylglycerophosphatase A compare
MMP_RS08100 -1.6 -5.5 8-amino-7-oxononanoate synthase compare
MMP_RS00050 -1.6 -6.9 AarF/UbiB family protein compare
MMP_RS06370 -1.6 -4.4 biotin synthase BioB compare
MMP_RS07955 -1.5 -5.8 FumA C-terminus/TtdB family hydratase beta subunit compare
MMP_RS06865 -1.5 -1.3 HypC/HybG/HupF family hydrogenase formation chaperone compare
MMP_RS02935 -1.5 -4.7 A24 family peptidase compare
MMP_RS06310 -1.5 -3.7 NAD(P)/FAD-dependent oxidoreductase compare
MMP_RS00130 -1.5 -1.4 nickel-responsive transcriptional regulator NikR compare
MMP_RS08330 -1.5 -5.9 NADH-quinone oxidoreductase subunit H compare
MMP_RS06855 -1.5 -9.9 hypothetical protein compare
MMP_RS01045 -1.5 -7.3 diphthamide biosynthesis enzyme Dph2 compare
MMP_RS06130 -1.5 -3.8 peptidylprolyl isomerase compare
MMP_RS03125 -1.5 -5.1 cell division ATPase MinD compare
MMP_RS07710 -1.5 -6.8 cell division protein FtsZ compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis S2 in stress experiments

For stress ammonium sulfide solution across organisms