Experiment set9IT018 for Pseudomonas syringae pv. syringae B728a

Compare to:

KB with Resveratrol 10 mM

200 most important genes:

  gene name fitness t score description  
Psyr_4683 -4.2 -7.4 dethiobiotin synthase compare
Psyr_0034 -3.3 -3.9 tryptophan synthase, beta chain compare
Psyr_4740 -3.2 -8.3 thiazole-phosphate synthase compare
Psyr_4340 -3.2 -11.7 phosphomethylpyrimidine kinase, putative compare
Psyr_4687 -3.1 -11.0 biotin synthase compare
Psyr_4341 -3.1 -9.6 thiamine-phosphate diphosphorylase compare
Psyr_4684 -2.8 -4.0 biotin synthesis protein BioC compare
Psyr_0951 -2.7 -4.6 UBA/THIF-type NAD/FAD binding fold:MoeZ/MoeB compare
Psyr_4091 -2.6 -6.4 8-oxo-dGTPase compare
Psyr_0033 -2.6 -3.4 tryptophan synthase, alpha chain compare
Psyr_3202 -2.5 -2.7 NADH dehydrogenase subunit G compare
Psyr_0454 -2.1 -6.3 adenosylmethionine-8-amino-7-oxononanoate aminotransferase apoenzyme compare
Psyr_4991 -2.0 -2.9 hypothetical protein compare
Psyr_4686 -1.9 -6.6 8-amino-7-oxononanoate synthase compare
Psyr_1373 -1.9 -4.4 Peptidoglycan-binding LysM:Peptidase M23B compare
Psyr_0835 -1.9 -6.2 transcriptional regulator, TraR/DksA family compare
Psyr_1747 -1.8 -6.0 ATP-dependent Clp protease proteolytic subunit ClpP compare
Psyr_3620 -1.6 -2.3 hypothetical protein compare
Psyr_1544 -1.5 -4.3 SirA-like protein compare
Psyr_1613 -1.5 -4.2 septum site-determining protein MinC compare
Psyr_3665 -1.5 -4.3 conserved hypothetical protein compare
Psyr_4519 -1.5 -6.8 General substrate transporter:Major facilitator superfamily compare
Psyr_3315 -1.5 -2.4 conserved hypothetical protein compare
Psyr_5135 -1.4 -0.8 Protein of unknown function DUF37 compare
Psyr_1963 -1.4 -4.6 Cyclic peptide transporter compare
Psyr_2980 -1.4 -4.1 UDP-glucose pyrophosphorylase compare
Psyr_3208 -1.4 -1.8 NADH dehydrogenase subunit M compare
Psyr_3419 -1.4 -3.9 4Fe-4S ferredoxin, iron-sulfur binding protein compare
Psyr_3597 -1.4 -1.7 ABC transporter compare
Psyr_1663 -1.4 -3.5 phosphoribosylanthranilate isomerase compare
Psyr_4920 -1.4 -2.0 conserved hypothetical bacteriophage protein compare
Psyr_4627 -1.3 -2.7 dimethyladenosine transferase compare
Psyr_1251 -1.3 -3.0 quinoprotein compare
Psyr_0531 -1.3 -2.8 LmbE-like protein compare
Psyr_4015 -1.3 -2.7 conserved domain protein compare
Psyr_3627 -1.3 -3.4 OsmC-like protein compare
Psyr_4009 -1.3 -5.1 RND efflux system, outer membrane lipoprotein, NodT compare
Psyr_2312 -1.3 -1.6 Protein of unknown function DUF24 compare
Psyr_5133 -1.3 -4.1 tRNA modification GTPase trmE compare
Psyr_2071 -1.3 -2.7 outer membrane lipoprotein OprI compare
Psyr_0383 -1.3 -1.1 Twin-arginine translocation protein TatB compare
Psyr_2897 -1.3 -4.9 regulatory protein, LuxR:Response regulator receiver compare
Psyr_2668 -1.3 -3.1 Helix-turn-helix, Fis-type compare
Psyr_1227 -1.3 -2.1 Queuosine biosynthesis protein compare
Psyr_0255 -1.2 -2.4 glutamate-cysteine ligase compare
Psyr_0475 -1.2 -3.0 Protein of unknown function YGGT compare
Psyr_5132 -1.2 -3.6 Glucose-inhibited division protein A subfamily compare
Psyr_RNA28 -1.2 -2.2 tRNA-Val compare
Psyr_2151 -1.2 -2.0 monosaccharide ABC transporter substrate-binding protein, CUT2 family compare
Psyr_2617 -1.2 -1.4 Secretion protein HlyD compare
Psyr_3906 -1.1 -1.6 regulatory protein, DeoR compare
Psyr_3179 -1.1 -2.2 DNA translocase FtsK compare
Psyr_0574 -1.1 -4.5 protease FtsH subunit HflK compare
Psyr_4158 -1.1 -6.4 conserved hypothetical protein compare
Psyr_2227 -1.1 -1.2 conserved hypothetical protein compare
Psyr_4464 -1.1 -1.5 lipoprotein, putative compare
Psyr_1268 -1.1 -4.7 extracellular solute-binding protein, family 3:SLT compare
Psyr_1236 -1.1 -3.6 transcriptional regulator, BadM/Rrf2 family compare
Psyr_4089 -1.1 -4.8 PAS compare
Psyr_3698 -1.1 -3.0 Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal:Hpt compare
Psyr_2348 -1.1 -2.7 hypothetical protein compare
Psyr_3585 -1.1 -2.6 Sua5/YciO/YrdC/YwlC compare
Psyr_1408 -1.1 -2.0 Holliday junction endonuclease RuvC compare
Psyr_3199 -1.0 -2.5 NADH dehydrogenase subunit D / NADH dehydrogenase subunit C compare
Psyr_4203 -1.0 -1.6 SsrA-binding protein compare
Psyr_0487 -1.0 -2.1 glutathione synthase compare
Psyr_2591 -1.0 -4.1 transport system permease protein compare
Psyr_4460 -1.0 -1.6 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II compare
Psyr_3198 -1.0 -1.7 NADH dehydrogenase subunit B compare
Psyr_4043 -1.0 -2.5 hypothetical protein compare
Psyr_4580 -1.0 -2.4 anthranilate phosphoribosyltransferase compare
Psyr_2180 -1.0 -2.2 transcriptional regulator, LysR family compare
Psyr_0549 -1.0 -1.8 Metallophosphoesterase compare
Psyr_3688 -1.0 -2.1 conserved hypothetical protein compare
Psyr_4336 -1.0 -1.8 ribosomal large subunit pseudouridine synthase E compare
Psyr_1419 -1.0 -2.5 preQ(0) biosynthesis protein QueC compare
Psyr_0917 -0.9 -6.5 ABC-2 compare
Psyr_4566 -0.9 -5.2 Peptidase M23B compare
Psyr_3290 -0.9 -2.8 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase compare
Psyr_0575 -0.9 -1.7 protease FtsH subunit HflC compare
Psyr_1140 -0.9 -2.6 Disulfide bond formation protein DsbB compare
Psyr_2256 -0.9 -2.2 ABC transporter compare
Psyr_4386 -0.9 -2.1 conserved hypothetical protein compare
Psyr_1458 -0.9 -1.7 hypothetical protein compare
Psyr_2137 -0.9 -2.3 molybdopterin molybdochelatase compare
Psyr_0571 -0.9 -3.0 tRNA isopentenyltransferase compare
Psyr_4139 -0.9 -3.8 Mce4/Rv3499c/MTV023.06c protein compare
Psyr_4582 -0.9 -1.2 hypothetical protein compare
Psyr_3947 -0.9 -1.2 Methyltransferase, putative compare
Psyr_1942 -0.9 -2.9 conserved hypothetical protein compare
Psyr_4194 -0.9 -2.8 DnaJ central region:Heat shock protein DnaJ, N-terminal:Chaperone DnaJ, C-terminal compare
Psyr_0529 -0.9 -2.6 Glycosyl transferase, group 1 compare
Psyr_4262 -0.9 -1.0 lipoprotein, putative compare
Psyr_1910 -0.9 -3.0 VacJ-like lipoprotein compare
Psyr_2830 -0.9 -1.4 conserved hypothetical protein compare
Psyr_2592 -0.9 -3.1 transport system permease protein compare
Psyr_0616 -0.9 -1.4 conserved domain protein compare
Psyr_4140 -0.8 -1.5 Protein of unknown function DUF140 compare
Psyr_3193 -0.8 -1.9 Transcription factor jumonji, jmjC compare
Psyr_5065 -0.8 -4.1 ATP-dependent DNA helicase UvrD compare
Psyr_2346 -0.8 -3.1 conserved hypothetical protein compare
Psyr_3674 -0.8 -1.8 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase compare
Psyr_3854 -0.8 -0.9 OmpA/MotB compare
Psyr_4512 -0.8 -4.5 putative phage-related protein compare
Psyr_1955 -0.8 -2.4 Propeptide, PepSY amd peptidase M4:PepSY-associated TM helix compare
Psyr_4115 -0.8 -1.6 phosphoheptose isomerase compare
Psyr_1371 -0.8 -3.8 5'-nucleotidase / exopolyphosphatase / 3'-nucleotidase compare
Psyr_1511 -0.8 -2.9 type II secretion system protein E compare
Psyr_1410 -0.8 -1.9 Holliday junction DNA helicase RuvB compare
Psyr_0918 -0.8 -6.2 ABC transporter compare
Psyr_2594 -0.8 -0.9 unknown conserved protein in bacilli compare
Psyr_3904 -0.8 -3.9 Major intrinsic protein compare
Psyr_0936 -0.8 -5.3 Glycosyl transferase, group 1 compare
Psyr_0576 -0.8 -1.3 ATP phosphoribosyltransferase regulatory subunit, putative compare
Psyr_1546 -0.8 -2.4 Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen compare
Psyr_1418 -0.8 -1.5 Radical SAM compare
Psyr_1615 -0.8 -2.1 Patatin compare
Psyr_0263 -0.8 -2.3 Two-component response regulator AlgB compare
Psyr_2259 -0.8 -1.7 Beta-lactamase-like protein compare
Psyr_2347 -0.8 -2.2 hypothetical protein compare
Psyr_0014 -0.8 -0.7 lipid A biosynthesis acyltransferase compare
Psyr_1017 -0.8 -1.5 type III effector HopJ1 compare
Psyr_2471 -0.8 -1.3 hydroxymethylglutaryl-CoA lyase compare
Psyr_2593 -0.8 -1.9 ABC transporter compare
Psyr_5129 -0.8 -2.5 chromosome segregation DNA-binding protein compare
Psyr_4362 -0.8 -1.9 Rare lipoprotein A compare
Psyr_3677 -0.7 -1.4 Aminotransferase, class I and II compare
Psyr_0535 -0.7 -1.9 toluene tolerance protein, putative compare
Psyr_0724 -0.7 -1.6 conserved hypothetical protein compare
Psyr_4183 -0.7 -1.2 protein translocase subunit secG compare
Psyr_4151 -0.7 -1.1 Phosphocarrier HPr protein compare
Psyr_0070 -0.7 -1.9 hypothetical protein compare
Psyr_3282 -0.7 -3.3 transcriptional regulator, TetR family compare
Psyr_4939 -0.7 -2.1 conserved hypothetical protein compare
Psyr_1751 -0.7 -2.6 PpiC-type peptidyl-prolyl cis-trans isomerase compare
Psyr_0826 -0.7 -3.4 glucose-6-phosphate isomerase compare
Psyr_3848 -0.7 -2.0 L-valine ABC transporter ATP-binding protein / L-isoleucine ABC transporter ATP-binding protein / L-leucine ABC transporter ATP-binding protein compare
Psyr_3842 -0.7 -3.6 SNF2-related:Helicase, C-terminal:Type III restriction enzyme, res subunit compare
Psyr_3255 -0.7 -1.8 multisubunit potassium/proton antiporter, PhaE subunit compare
Psyr_4660 -0.7 -1.9 Formate/nitrite transporter compare
Psyr_3727 -0.7 -2.2 conserved hypothetical protein compare
Psyr_4808 -0.7 -1.5 conserved hypothetical protein compare
Psyr_1930 -0.7 -2.3 hypothetical protein compare
Psyr_3293 -0.7 -1.5 UspA compare
Psyr_2318 -0.7 -1.7 CDS compare
Psyr_0849 -0.7 -4.4 CDP-diacylglycerol--serine O-phosphatidyltransferase compare
Psyr_3598 -0.7 -2.1 Binding-protein-dependent transport systems inner membrane component compare
Psyr_0916 -0.7 -4.7 GDP-mannose 4,6-dehydratase compare
Psyr_3776 -0.7 -2.5 Cytosine deaminase compare
Psyr_1024 -0.7 -1.5 Flavodoxin/nitric oxide synthase compare
Psyr_0385 -0.7 -2.1 phosphoribosyl-ATP pyrophosphatase compare
Psyr_2582 -0.7 -3.7 TonB-dependent siderophore receptor compare
Psyr_0831 -0.7 -1.3 Two-component response regulator CbrB compare
Psyr_5067 -0.7 -2.5 conserved hypothetical protein compare
Psyr_1667 -0.7 -3.5 Colicin V production protein compare
Psyr_1736 -0.7 -2.5 Helix-turn-helix, Fis-type compare
Psyr_1587 -0.7 -2.7 Bile acid:sodium symporter compare
Psyr_0920 -0.7 -5.7 Glycosyl transferase, group 1 compare
Psyr_2143 -0.7 -1.0 delta1-piperideine 2-carboxylate reductase compare
Psyr_1885 -0.7 -0.9 hypothetical protein compare
Psyr_0590 -0.7 -2.9 Transglutaminase-like protein compare
Psyr_3031 -0.7 -1.8 Thiolase compare
Psyr_0250 -0.7 -2.2 conserved hypothetical protein compare
Psyr_0347 -0.7 -2.4 hypothetical protein compare
Psyr_2202 -0.6 -1.0 ABC transporter compare
Psyr_4822 -0.6 -1.7 Helix-turn-helix, Fis-type:Nitrogen regulation protein NR(I) compare
Psyr_1864 -0.6 -2.3 spermidine synthase compare
Psyr_2242 -0.6 -2.3 conserved hypothetical protein compare
Psyr_3257 -0.6 -1.7 multisubunit potassium/proton antiporter, PhaG subunit compare
Psyr_2386 -0.6 -1.1 hypothetical protein compare
Psyr_2942 -0.6 -2.1 amino acid ABC transporter ATP-binding protein, PAAT family compare
Psyr_1614 -0.6 -0.7 lipid A biosynthesis acyltransferase compare
Psyr_0982 -0.6 -2.4 conserved hypothetical protein compare
Psyr_3739 -0.6 -1.5 conserved hypothetical protein compare
Psyr_4408 -0.6 -3.5 Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal:Histidine kinase:Histidine kinase compare
Psyr_5130 -0.6 -3.5 chromosome segregation ATPase compare
Psyr_3952 -0.6 -1.2 conserved hypothetical protein compare
Psyr_0246 -0.6 -3.9 aminomethyltransferase compare
Psyr_0444 -0.6 -0.9 Malonate decarboxylase delta subunit compare
Psyr_2588 -0.6 -1.5 HpcH/HpaI aldolase compare
Psyr_3954 -0.6 -2.4 GTP-binding protein LepA compare
Psyr_4100 -0.6 -3.1 D-alanine--D-alanine ligase compare
Psyr_3837 -0.6 -1.1 conserved hypothetical protein compare
Psyr_2285 -0.6 -0.9 Twin-arginine translocation pathway signal compare
Psyr_3013 -0.6 -1.4 magnesium chelatase subunit ChlD compare
Psyr_1152 -0.6 -2.2 transcriptional regulator, ArsR family compare
Psyr_2636 -0.6 -1.4 TspO/MBR-related protein compare
Psyr_2411 -0.6 -1.4 Short-chain dehydrogenase/reductase SDR compare
Psyr_2211 -0.6 -1.6 monooxygenase, NtaA/SnaA/SoxA family compare
Psyr_3055 -0.6 -1.4 Aminoglycoside phosphotransferase compare
Psyr_0528 -0.6 -1.5 Carbamoyltransferase compare
Psyr_2560 -0.6 -2.0 hypothetical protein compare
Psyr_2916 -0.6 -2.7 Substrate-binding region of ABC-type glycine betaine transport system compare
Psyr_4008 -0.6 -4.8 Hydrophobe/amphiphile efflux-1 HAE1 compare
Psyr_2974 -0.6 -2.7 FAD-dependent pyridine nucleotide-disulfide oxidoreductase compare
Psyr_2875 -0.6 -1.7 monosaccharide ABC transporter membrane protein, CUT2 family compare
Psyr_2579 -0.6 -2.9 Aldehyde dehydrogenase compare
Psyr_3425 -0.6 -1.3 Cyclic nucleotide-binding:Bacterial regulatory protein, Crp compare
Psyr_3181 -0.6 -2.0 Arginyltransferase compare
Psyr_1748 -0.6 -1.9 ATP-dependent Clp protease ATP-binding subunit ClpX compare


Specific Phenotypes

None in this experiment

For Pseudomonas syringae pv. syringae B728a in stress experiments

For stress Resveratrol across organisms