Experiment set9IT017 for Pseudomonas syringae pv. syringae B728a

Compare to:

KB with Prenyletin 10 mM

200 most important genes:

  gene name fitness t score description  
Psyr_0951 -3.9 -4.8 UBA/THIF-type NAD/FAD binding fold:MoeZ/MoeB compare
Psyr_4203 -3.4 -3.9 SsrA-binding protein compare
Psyr_4340 -3.3 -12.5 phosphomethylpyrimidine kinase, putative compare
Psyr_1544 -3.2 -6.6 SirA-like protein compare
Psyr_0034 -3.0 -5.2 tryptophan synthase, beta chain compare
Psyr_4683 -2.8 -6.5 dethiobiotin synthase compare
Psyr_4686 -2.7 -8.7 8-amino-7-oxononanoate synthase compare
Psyr_4341 -2.6 -9.6 thiamine-phosphate diphosphorylase compare
Psyr_1373 -2.5 -4.7 Peptidoglycan-binding LysM:Peptidase M23B compare
Psyr_4740 -2.4 -5.7 thiazole-phosphate synthase compare
Psyr_5132 -2.4 -4.6 Glucose-inhibited division protein A subfamily compare
Psyr_2980 -2.4 -5.3 UDP-glucose pyrophosphorylase compare
Psyr_4687 -2.3 -10.4 biotin synthase compare
Psyr_4991 -2.2 -2.9 hypothetical protein compare
Psyr_2264 -2.2 -2.8 Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal compare
Psyr_0383 -2.0 -1.3 Twin-arginine translocation protein TatB compare
Psyr_0033 -2.0 -3.5 tryptophan synthase, alpha chain compare
Psyr_3701 -2.0 -2.6 thioredoxin, putative compare
Psyr_1613 -2.0 -7.4 septum site-determining protein MinC compare
Psyr_2593 -2.0 -3.6 ABC transporter compare
Psyr_4684 -1.9 -2.9 biotin synthesis protein BioC compare
Psyr_4581 -1.9 -1.9 anthranilate synthase, component II compare
Psyr_0571 -1.8 -4.5 tRNA isopentenyltransferase compare
Psyr_3459 -1.8 -2.9 Helix-turn-helix, Fis-type compare
Psyr_3419 -1.8 -5.1 4Fe-4S ferredoxin, iron-sulfur binding protein compare
Psyr_4091 -1.8 -3.9 8-oxo-dGTPase compare
Psyr_0454 -1.8 -5.8 adenosylmethionine-8-amino-7-oxononanoate aminotransferase apoenzyme compare
Psyr_3554 -1.8 -1.5 Carbon storage regulator compare
Psyr_3020 -1.7 -2.1 precorrin-4 C11-methyltransferase compare
Psyr_2383 -1.7 -4.1 Protein of unknown function DUF72 compare
Psyr_0529 -1.7 -4.5 Glycosyl transferase, group 1 compare
Psyr_2594 -1.7 -1.9 unknown conserved protein in bacilli compare
Psyr_0835 -1.7 -5.8 transcriptional regulator, TraR/DksA family compare
Psyr_4512 -1.7 -6.9 putative phage-related protein compare
Psyr_4519 -1.6 -6.2 General substrate transporter:Major facilitator superfamily compare
Psyr_1419 -1.6 -4.3 preQ(0) biosynthesis protein QueC compare
Psyr_5135 -1.6 -0.8 Protein of unknown function DUF37 compare
Psyr_0831 -1.6 -2.7 Two-component response regulator CbrB compare
Psyr_1910 -1.5 -5.2 VacJ-like lipoprotein compare
Psyr_4115 -1.5 -3.1 phosphoheptose isomerase compare
Psyr_1953 -1.5 -2.4 conserved hypothetical protein compare
Psyr_4465 -1.5 -2.5 conserved domain protein compare
Psyr_4774 -1.4 -1.9 Hypothetical protein compare
Psyr_1371 -1.4 -5.9 5'-nucleotidase / exopolyphosphatase / 3'-nucleotidase compare
Psyr_4139 -1.4 -4.5 Mce4/Rv3499c/MTV023.06c protein compare
Psyr_0531 -1.4 -1.9 LmbE-like protein compare
Psyr_4380 -1.3 -2.9 translation initiation factor 1 (eIF-1/SUI1) compare
Psyr_4754 -1.3 -1.9 16S rRNA m(2)G-966 methyltransferase compare
Psyr_0372 -1.3 -2.7 CDS compare
Psyr_2572 -1.3 -3.0 ribose-5-phosphate isomerase compare
Psyr_3640 -1.3 -1.9 conserved hypothetical protein compare
Psyr_3208 -1.3 -2.9 NADH dehydrogenase subunit M compare
Psyr_4808 -1.3 -1.4 conserved hypothetical protein compare
Psyr_2591 -1.3 -5.1 transport system permease protein compare
Psyr_2088 -1.3 -1.8 2-methylaconitate cis-trans isomerase compare
Psyr_4418 -1.3 -2.1 Precorrin-6Y C5,15-methyltransferase (decarboxylating) compare
Psyr_2092 -1.3 -2.6 Protein of unknown function 1935 compare
Psyr_4830 -1.3 -2.0 Binding-protein-dependent transport systems inner membrane component compare
Psyr_0487 -1.3 -2.5 glutathione synthase compare
Psyr_0255 -1.2 -2.1 glutamate-cysteine ligase compare
Psyr_0025 -1.2 -3.3 shikimate dehydrogenase compare
Psyr_0475 -1.2 -1.9 Protein of unknown function YGGT compare
Psyr_0917 -1.2 -7.3 ABC-2 compare
Psyr_1663 -1.2 -2.9 phosphoribosylanthranilate isomerase compare
Psyr_0918 -1.2 -8.6 ABC transporter compare
Psyr_2112 -1.2 -2.2 Protein with unknown function DUF469 compare
Psyr_1499 -1.2 -3.1 Protein of unknown function DUF compare
Psyr_2897 -1.2 -3.9 regulatory protein, LuxR:Response regulator receiver compare
Psyr_1556 -1.1 -2.5 hypothetical protein compare
Psyr_2143 -1.1 -2.0 delta1-piperideine 2-carboxylate reductase compare
Psyr_1973 -1.1 -2.3 Aspartate transaminase compare
Psyr_4566 -1.1 -5.6 Peptidase M23B compare
Psyr_3462 -1.1 -2.7 conserved hypothetical protein compare
Psyr_4658 -1.1 -1.5 CDS compare
Psyr_1806 -1.1 -1.8 Ureidoglycolate hydrolase compare
Psyr_5067 -1.1 -4.9 conserved hypothetical protein compare
Psyr_3581 -1.1 -4.4 ribosomal large subunit pseudouridine synthase B compare
Psyr_0936 -1.1 -7.0 Glycosyl transferase, group 1 compare
Psyr_4138 -1.1 -2.7 Toluene tolerance compare
Psyr_0014 -1.1 -1.0 lipid A biosynthesis acyltransferase compare
Psyr_3005 -1.1 -2.5 3-oxoadipate enol-lactonase compare
Psyr_2211 -1.1 -2.5 monooxygenase, NtaA/SnaA/SoxA family compare
Psyr_1017 -1.0 -2.0 type III effector HopJ1 compare
Psyr_3036 -1.0 -2.0 transcriptional regulator, TetR family compare
Psyr_3193 -1.0 -2.4 Transcription factor jumonji, jmjC compare
Psyr_4582 -1.0 -1.2 hypothetical protein compare
Psyr_4043 -1.0 -1.8 hypothetical protein compare
Psyr_1667 -1.0 -4.4 Colicin V production protein compare
Psyr_0044 -1.0 -1.9 transferase hexapeptide repeat protein compare
Psyr_5133 -1.0 -3.4 tRNA modification GTPase trmE compare
Psyr_4580 -1.0 -2.6 anthranilate phosphoribosyltransferase compare
Psyr_0575 -1.0 -2.0 protease FtsH subunit HflC compare
Psyr_4622 -1.0 -3.5 Nucleotidyl transferase compare
Psyr_0214 -1.0 -2.4 conserved hypothetical protein compare
Psyr_4897 -0.9 -1.7 imidazoleglycerol-phosphate dehydratase compare
Psyr_3842 -0.9 -3.9 SNF2-related:Helicase, C-terminal:Type III restriction enzyme, res subunit compare
Psyr_0574 -0.9 -3.6 protease FtsH subunit HflK compare
Psyr_0524 -0.9 -2.5 Lipopolysaccharide kinase compare
Psyr_0784 -0.9 -2.0 CheW-like protein compare
Psyr_3806 -0.9 -3.2 hypothetical protein compare
Psyr_1747 -0.9 -2.8 ATP-dependent Clp protease proteolytic subunit ClpP compare
Psyr_2987 -0.9 -2.5 Cof protein:HAD-superfamily hydrolase, subfamily IIB compare
Psyr_3289 -0.9 -1.9 3-ketoacyl-CoA thiolase compare
Psyr_2245 -0.9 -1.9 conserved domain protein compare
Psyr_0666 -0.9 -3.0 transport system permease protein compare
Psyr_4350 -0.9 -2.2 Protein of unknown function DUF218 compare
Psyr_2137 -0.9 -2.6 molybdopterin molybdochelatase compare
Psyr_4845 -0.9 -1.9 conserved hypothetical protein compare
Psyr_2592 -0.9 -3.7 transport system permease protein compare
Psyr_0914 -0.9 -5.4 Glycosyl transferase, group 1 compare
Psyr_4140 -0.9 -1.7 Protein of unknown function DUF140 compare
Psyr_3427 -0.9 -2.9 conserved hypothetical protein compare
Psyr_1236 -0.9 -2.2 transcriptional regulator, BadM/Rrf2 family compare
Psyr_5065 -0.9 -4.6 ATP-dependent DNA helicase UvrD compare
Psyr_2351 -0.9 -2.5 tRNA synthetase, class-II (G, H, P and S) compare
Psyr_4660 -0.9 -2.7 Formate/nitrite transporter compare
Psyr_2636 -0.9 -2.7 TspO/MBR-related protein compare
Psyr_2582 -0.9 -4.9 TonB-dependent siderophore receptor compare
Psyr_0982 -0.9 -2.7 conserved hypothetical protein compare
Psyr_1900 -0.9 -3.1 ApbE-like lipoprotein compare
Psyr_3857 -0.9 -2.7 conserved hypothetical protein compare
Psyr_0954 -0.9 -1.6 Protein of unknown function UPF0153 compare
Psyr_0726 -0.9 -3.1 ribosomal large subunit pseudouridine synthase D compare
Psyr_4627 -0.8 -1.5 dimethyladenosine transferase compare
Psyr_2105 -0.8 -2.5 conserved hypothetical protein compare
Psyr_3179 -0.8 -1.3 DNA translocase FtsK compare
Psyr_3202 -0.8 -1.4 NADH dehydrogenase subunit G compare
Psyr_4194 -0.8 -2.4 DnaJ central region:Heat shock protein DnaJ, N-terminal:Chaperone DnaJ, C-terminal compare
Psyr_3596 -0.8 -2.3 Selenoprotein W-related protein compare
Psyr_0498 -0.8 -2.5 Protein of unknown function DUF1445 compare
Psyr_1121 -0.8 -1.8 6-phosphogluconolactonase compare
Psyr_2854 -0.8 -3.1 conserved hypothetical protein compare
Psyr_3637 -0.8 -5.6 Glycosyl transferase, family 4 compare
Psyr_3673 -0.8 -1.5 Phosphoglycerate/bisphosphoglycerate mutase compare
Psyr_0849 -0.8 -5.0 CDP-diacylglycerol--serine O-phosphatidyltransferase compare
Psyr_3418 -0.8 -2.4 PilT protein, N-terminal compare
Psyr_2347 -0.8 -1.6 hypothetical protein compare
Psyr_1796 -0.8 -1.6 GCN5-related N-acetyltransferase compare
Psyr_1761 -0.8 -2.3 Hydroxyacylglutathione hydrolase compare
Psyr_3395 -0.8 -2.3 FlhB domain protein compare
Psyr_0735 -0.8 -2.5 Peptidase S24, S26A and S26B compare
Psyr_2836 -0.8 -2.2 hypothetical protein compare
Psyr_2758 -0.8 -3.2 ABC transporter:TOBE compare
Psyr_1688 -0.8 -1.3 Protein of unknown function DUF1315 compare
Psyr_4386 -0.8 -1.9 conserved hypothetical protein compare
Psyr_2311 -0.8 -2.5 conserved hypothetical protein compare
Psyr_0826 -0.8 -3.4 glucose-6-phosphate isomerase compare
Psyr_1158 -0.8 -2.7 Gluconate transporter compare
Psyr_3257 -0.8 -1.9 multisubunit potassium/proton antiporter, PhaG subunit compare
Psyr_3288 -0.8 -2.3 conserved hypothetical protein compare
Psyr_3932 -0.8 -1.4 Cobalamin synthesis protein/P47K:Cobalamin synthesis protein/P47K compare
Psyr_4336 -0.8 -1.9 ribosomal large subunit pseudouridine synthase E compare
Psyr_0552 -0.8 -2.9 conserved hypothetical protein compare
Psyr_1268 -0.8 -2.8 extracellular solute-binding protein, family 3:SLT compare
Psyr_0916 -0.7 -4.4 GDP-mannose 4,6-dehydratase compare
Psyr_0579 -0.7 -4.6 RNAse R compare
Psyr_4316 -0.7 -2.7 conserved hypothetical protein compare
Psyr_3667 -0.7 -1.5 conserved hypothetical protein compare
Psyr_3142 -0.7 -1.8 general secretion pathway protein N, putative compare
Psyr_2150 -0.7 -1.2 protein of unknown function DUF903 compare
Psyr_2927 -0.7 -1.3 transcriptional regulator, TetR family compare
Psyr_1755 -0.7 -2.9 ABC transporter compare
Psyr_4424 -0.7 -3.0 Propeptide, PepSY amd peptidase M4:PepSY-associated TM helix compare
Psyr_2202 -0.7 -1.4 ABC transporter compare
Psyr_3904 -0.7 -3.6 Major intrinsic protein compare
Psyr_0535 -0.7 -2.0 toluene tolerance protein, putative compare
Psyr_0464 -0.7 -1.5 hypothetical protein compare
Psyr_2144 -0.7 -1.1 conserved hypothetical protein compare
Psyr_3636 -0.7 -4.4 Polysaccharide biosynthesis protein CapD compare
Psyr_4967 -0.7 -2.7 conserved hypothetical protein compare
Psyr_2590 -0.7 -1.5 Periplasmic binding protein compare
Psyr_4144 -0.7 -1.3 Protein of unknown function DUF1239 compare
Psyr_3358 -0.7 -1.7 transmembrane pair compare
Psyr_4752 -0.7 -2.2 Insulinase-like:Peptidase M16, C-terminal compare
Psyr_2354 -0.7 -3.0 Taurine catabolism dioxygenase TauD/TfdA compare
Psyr_0219 -0.7 -3.4 phosphomannomutase compare
Psyr_1247 -0.7 -1.4 conserved hypothetical protein compare
Psyr_3476 -0.7 -1.9 Flagellar basal body rod protein:Protein of unknown function DUF1078 compare
Psyr_1614 -0.7 -0.8 lipid A biosynthesis acyltransferase compare
Psyr_4842 -0.7 -3.3 Phosphoenolpyruvate-protein phosphotransferase compare
Psyr_1304 -0.7 -1.6 CheW-like protein compare
Psyr_4158 -0.7 -3.7 conserved hypothetical protein compare
Psyr_0528 -0.7 -1.4 Carbamoyltransferase compare
Psyr_3698 -0.7 -2.0 Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal:Hpt compare
Psyr_0785 -0.7 -1.8 Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer compare
Psyr_1408 -0.7 -1.0 Holliday junction endonuclease RuvC compare
Psyr_4062 -0.7 -1.9 Pyridoxamine 5'-phosphate oxidase-related protein compare
Psyr_4051 -0.7 -1.3 transcriptional regulator, ArsR family compare
Psyr_2578 -0.7 -1.4 regulatory protein, LuxR compare
Psyr_2809 -0.7 -2.0 hypothetical protein compare
Psyr_2330 -0.7 -2.1 FAD dependent oxidoreductase compare
Psyr_3618 -0.6 -1.9 Catalytic LigB subunit of aromatic ring-opening dioxygenase compare
Psyr_2265 -0.6 -1.7 Binding-protein-dependent transport systems inner membrane component compare
Psyr_1410 -0.6 -2.0 Holliday junction DNA helicase RuvB compare
Psyr_4003 -0.6 -1.8 conserved hypothetical protein compare
Psyr_0303 -0.6 -2.3 Ferredoxin:Oxidoreductase FAD/NAD(P)-binding protein compare
Psyr_3688 -0.6 -1.6 conserved hypothetical protein compare
Psyr_0041 -0.6 -1.6 Protein of unknown function DUF1161 compare
Psyr_2589 -0.6 -2.1 IucA/IucC compare
Psyr_1791 -0.6 -1.8 HAD-superfamily hydrolase, subfamily IA, variant 2 compare


Specific Phenotypes

None in this experiment

For Pseudomonas syringae pv. syringae B728a in stress experiments

For stress Prenyletin across organisms