Experiment set9IT014 for Methanococcus maripaludis S2

Compare to:

H2 McCas with 1 mM Na2S

200 most detrimental genes:

  gene name fitness t score description  
MMP_RS08315 +1.1 3.5 S-methyl-5-thioribose-1-phosphate isomerase compare
MMP_RS08265 +1.1 5.4 rubrerythrin compare
MMP_RS00655 +1.1 3.9 hypothetical protein compare
MMP_RS07925 +1.1 4.2 haloacid dehalogenase compare
MMP_RS08310 +1.0 2.6 TMEM165/GDT1 family protein compare
MMP_RS07895 +1.0 3.2 cytochrome c compare
MMP_RS08215 +0.9 3.2 DUF483 domain-containing protein compare
MMP_RS02045 +0.9 2.0 tRNA-Met compare
MMP_RS08380 +0.9 4.6 phosphatase PAP2 family protein compare
MMP_RS08390 +0.9 3.7 DUF5400 domain-containing protein compare
MMP_RS08415 +0.9 1.6 radical SAM protein compare
MMP_RS08640 +0.8 6.2 TIM barrel protein compare
MMP_RS08775 +0.8 4.0 methanogenesis marker 9 domain-containing protein compare
MMP_RS08480 +0.8 5.6 molybdate ABC transporter substrate-binding protein compare
MMP_RS08835 +0.8 5.0 H(2)-dependent methylenetetrahydromethanopterin dehydrogenase-related protein compare
MMP_RS08160 +0.8 2.7 EamA family transporter compare
MMP_RS01675 +0.8 1.6 hypothetical protein compare
MMP_RS00675 +0.7 0.8 nitroreductase family protein compare
MMP_RS08455 +0.7 3.6 multiprotein bridging factor aMBF1 compare
MMP_RS08260 +0.7 3.2 DUF99 family protein compare
MMP_RS08175 +0.7 3.5 7-cyano-7-deazaguanine synthase compare
MMP_RS04145 +0.7 1.5 hypothetical protein compare
MMP_RS09065 +0.7 5.1 hypothetical protein compare
MMP_RS07985 +0.7 4.9 nitroreductase family protein compare
MMP_RS08700 +0.7 5.1 hypothetical protein compare
MMP_RS06910 +0.7 3.9 RlmF-related methyltransferase compare
MMP_RS08575 +0.7 5.2 hypothetical protein compare
MMP_RS03065 +0.7 2.2 AzlC family ABC transporter permease compare
MMP_RS08430 +0.7 3.5 HAD family hydrolase compare
MMP_RS09025 +0.7 1.1 hypothetical protein compare
MMP_RS07915 +0.6 1.7 DUF4870 domain-containing protein compare
MMP_RS03340 +0.6 0.6 ABC transporter ATP-binding protein compare
MMP_RS06965 +0.6 3.6 TIGR04014 family B12-binding domain/radical SAM domain-containing protein compare
MMP_RS08325 +0.6 3.5 hypothetical protein compare
MMP_RS00400 +0.6 3.0 tributyrin esterase compare
MMP_RS01630 +0.6 4.2 N-glycosylase/DNA lyase compare
MMP_RS08705 +0.6 2.6 sulfopyruvate decarboxylase subunit beta compare
MMP_RS06335 +0.6 2.5 HAD family hydrolase compare
MMP_RS08090 +0.6 2.8 hypothetical protein compare
MMP_RS09060 +0.6 4.5 hypothetical protein compare
MMP_RS08235 +0.6 2.9 hypothetical protein compare
MMP_RS07155 +0.6 3.3 MFS transporter compare
MMP_RS01055 +0.6 2.6 hypothetical protein compare
MMP_RS08470 +0.6 3.0 ATP-binding cassette domain-containing protein compare
MMP_RS08085 +0.6 3.7 hypothetical protein compare
MMP_RS01580 +0.6 3.0 PQQ-binding-like beta-propeller repeat protein compare
MMP_RS08980 +0.6 2.2 hypothetical protein compare
MMP_RS02605 +0.6 0.6 MotA/TolQ/ExbB proton channel family protein compare
MMP_RS07890 +0.6 1.2 OB-fold nucleic acid binding domain-containing protein compare
MMP_RS01455 +0.6 3.9 nickel pincer cofactor biosynthesis protein LarC compare
MMP_RS00665 +0.6 2.6 hypothetical protein compare
MMP_RS07150 +0.6 2.2 MTH895/ArsE family thioredoxin-like protein compare
MMP_RS08555 +0.6 1.3 hypothetical protein compare
MMP_RS01570 +0.6 1.0 hypothetical protein compare
MMP_RS07885 +0.6 1.9 tripartite tricarboxylate transporter permease compare
MMP_RS07620 +0.6 1.9 energy-coupling factor ABC transporter substrate-binding protein compare
MMP_RS08500 +0.5 2.5 pyridoxal 5'-phosphate synthase glutaminase subunit PdxT compare
MMP_RS08755 +0.5 3.4 sodium:solute symporter family protein compare
MMP_RS07095 +0.5 1.2 PspC domain-containing protein compare
MMP_RS00325 +0.5 1.0 RNA-binding protein compare
MMP_RS08405 +0.5 3.4 MFS transporter compare
MMP_RS08245 +0.5 2.6 DUF4013 domain-containing protein compare
MMP_RS05975 +0.5 0.9 hypothetical protein compare
MMP_RS00705 +0.5 1.3 hypothetical protein compare
MMP_RS08475 +0.5 2.6 ABC transporter permease compare
MMP_RS00155 +0.5 2.0 heavy metal-binding domain-containing protein compare
MMP_RS00990 +0.5 1.3 hypothetical protein compare
MMP_RS07835 +0.5 1.9 TldD/PmbA family protein compare
MMP_RS08490 +0.5 3.6 hypothetical protein compare
MMP_RS04985 +0.5 2.4 DUF2180 family protein compare
MMP_RS05660 +0.5 2.8 phosphate ABC transporter substrate-binding protein compare
MMP_RS00950 +0.5 2.4 site-2 protease family protein compare
MMP_RS00565 +0.5 2.8 CBS domain-containing protein compare
MMP_RS01155 +0.5 3.0 XRE family transcriptional regulator compare
MMP_RS08275 +0.5 2.2 hypothetical protein compare
MMP_RS02805 +0.5 0.8 HEPN domain-containing protein compare
MMP_RS07850 +0.5 1.5 prephenate dehydratase compare
MMP_RS00385 +0.5 2.5 P-II family nitrogen regulator compare
MMP_RS06500 +0.5 3.2 ATP-binding protein compare
MMP_RS08250 +0.5 2.6 pyruvate kinase compare
MMP_RS08240 +0.5 2.1 methanogenesis marker 16 metalloprotein compare
MMP_RS06520 +0.5 1.9 DUF1786 domain-containing protein compare
MMP_RS00335 +0.5 1.9 5-amino-6-(D-ribitylamino)uracil--L-tyrosine 4-hydroxyphenyl transferase CofH compare
MMP_RS07100 +0.5 2.2 hypothetical protein compare
MMP_RS08770 +0.4 1.8 hypothetical protein compare
MMP_RS00960 +0.4 2.0 iron export ABC transporter permease subunit FetB compare
MMP_RS02495 +0.4 1.5 hypothetical protein compare
MMP_RS07680 +0.4 1.6 DUF366 family protein compare
MMP_RS08205 +0.4 2.3 stage II sporulation protein M compare
MMP_RS00395 +0.4 0.9 MGMT family protein compare
MMP_RS07590 +0.4 2.6 hypothetical protein compare
MMP_RS06305 +0.4 2.5 transporter substrate-binding domain-containing protein compare
MMP_RS07800 +0.4 2.2 ATP-binding cassette domain-containing protein compare
MMP_RS07840 +0.4 1.3 ribonuclease III compare
MMP_RS03220 +0.4 1.4 RNA 2' 3'-cyclic phosphodiesterase compare
MMP_RS06185 +0.4 1.9 thermonuclease family protein compare
MMP_RS07815 +0.4 0.6 DUF2120 domain-containing protein compare
MMP_RS07085 +0.4 2.0 ribonuclease HII compare
MMP_RS08280 +0.4 1.4 proteasome assembly chaperone family protein compare
MMP_RS07910 +0.4 1.6 NAD(P)H-hydrate dehydratase compare
MMP_RS01320 +0.4 1.2 hypothetical protein compare
MMP_RS06990 +0.4 1.8 CatB-related O-acetyltransferase compare
MMP_RS01060 +0.4 2.6 calcium/sodium antiporter compare
MMP_RS06745 +0.4 1.2 DUF2119 domain-containing protein compare
MMP_RS05675 +0.4 1.3 phosphate ABC transporter ATP-binding protein PstB compare
MMP_RS00085 +0.4 2.6 DNA cytosine methyltransferase compare
MMP_RS08410 +0.4 1.4 DUF169 domain-containing protein compare
MMP_RS00945 +0.4 0.7 PadR family transcriptional regulator compare
MMP_RS08130 +0.4 2.3 IGHMBP2 family helicase compare
MMP_RS08400 +0.4 0.7 MJ0307 family thioredoxin compare
MMP_RS00700 +0.4 1.3 OB-fold nucleic acid binding domain-containing protein compare
MMP_RS00545 +0.4 2.0 XRE family transcriptional regulator compare
MMP_RS00345 +0.4 2.2 DUF2666 domain-containing protein compare
MMP_RS07970 +0.4 0.8 hypothetical protein compare
MMP_RS00660 +0.4 2.4 alkaline phosphatase family protein compare
MMP_RS00770 +0.4 1.7 hypothetical protein compare
MMP_RS00800 +0.4 2.4 Coenzyme F420 hydrogenase/dehydrogenase beta subunit C-terminal domain compare
MMP_RS06515 +0.4 1.2 UPF0489 family protein compare
MMP_RS02300 +0.4 1.7 NAD(P)H-dependent oxidoreductase compare
MMP_RS00635 +0.4 1.8 energy-coupling factor transporter transmembrane protein EcfT compare
MMP_RS01850 +0.4 1.9 phosphate ABC transporter substrate-binding protein compare
MMP_RS01855 +0.4 2.0 2-hydroxyacyl-CoA dehydratase family protein compare
MMP_RS07650 +0.4 2.7 TldD/PmbA family protein compare
MMP_RS05665 +0.4 2.0 phosphate ABC transporter permease subunit PstC compare
MMP_RS07905 +0.4 1.4 DUF3343 domain-containing protein compare
MMP_RS05415 +0.4 1.6 DUF22 domain-containing protein compare
MMP_RS05980 +0.3 2.4 ferritin compare
MMP_RS06250 +0.3 1.3 hypothetical protein compare
MMP_RS05895 +0.3 2.2 metallophosphoesterase compare
MMP_RS00195 +0.3 2.9 DUF4013 domain-containing protein compare
MMP_RS03890 +0.3 1.9 DUF2540 domain-containing protein compare
MMP_RS04730 +0.3 2.2 flavodoxin family protein compare
MMP_RS00630 +0.3 1.5 ECF transporter S component compare
MMP_RS06585 +0.3 0.7 DMT family protein compare
MMP_RS01965 +0.3 1.7 DUF1616 domain-containing protein compare
MMP_RS09030 +0.3 1.6 hypothetical protein compare
MMP_RS07145 +0.3 1.5 AmmeMemoRadiSam system protein B compare
MMP_RS04205 +0.3 1.3 carboxymuconolactone decarboxylase family protein compare
MMP_RS02725 +0.3 2.0 molybdate ABC transporter permease subunit compare
MMP_RS06190 +0.3 2.3 tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO compare
MMP_RS00625 +0.3 2.1 hypothetical protein compare
MMP_RS00795 +0.3 1.6 formate dehydrogenase H subunit alpha selenocysteine-containing compare
MMP_RS05695 +0.3 1.4 phospholipase D-like domain-containing protein compare
MMP_RS09035 +0.3 1.0 hypothetical protein compare
MMP_RS06570 +0.3 0.8 DUF190 domain-containing protein compare
MMP_RS01120 +0.3 1.4 permease compare
MMP_RS03465 +0.3 0.5 adenine phosphoribosyltransferase compare
MMP_RS07775 +0.3 1.2 alanine dehydrogenase compare
MMP_RS06375 +0.3 1.4 ATP-dependent sacrificial sulfur transferase LarE compare
MMP_RS06045 +0.3 1.9 DNA polymerase compare
MMP_RS01095 +0.3 1.4 iron ABC transporter permease compare
MMP_RS00955 +0.3 2.2 coenzyme gamma-F420-2:alpha-L-glutamate ligase compare
MMP_RS04515 +0.3 2.0 betaine/proline/choline family ABC transporter ATP-binding protein compare
MMP_RS08395 +0.3 0.9 DsrE family protein compare
MMP_RS07805 +0.3 1.4 ABC transporter permease compare
MMP_RS01065 +0.3 2.2 alpha/beta hydrolase compare
MMP_RS01515 +0.3 1.8 PINc/VapC family ATPase compare
MMP_RS07765 +0.3 1.4 sodium:alanine symporter family protein compare
MMP_RS05780 +0.3 1.6 multidrug resistance efflux transporter family protein compare
MMP_RS07715 +0.3 1.4 YfcE family phosphodiesterase compare
MMP_RS08385 +0.3 1.3 ABC transporter substrate-binding protein compare
MMP_RS06080 +0.3 2.2 radical SAM protein compare
MMP_RS02380 +0.3 1.7 ATP-binding protein compare
MMP_RS06560 +0.3 1.8 hypothetical protein compare
MMP_RS05940 +0.3 1.3 corrinoid protein compare
MMP_RS08535 +0.3 1.6 bis-aminopropyl spermidine synthase family protein compare
MMP_RS03740 +0.3 1.7 indolepyruvate oxidoreductase subunit beta compare
MMP_RS05790 +0.3 1.7 HDIG domain-containing protein compare
MMP_RS08485 +0.3 1.6 tungstate ABC transporter substrate-binding protein WtpA compare
MMP_RS06300 +0.3 1.2 ABC transporter substrate-binding protein compare
MMP_RS00105 +0.3 1.5 hypothetical protein compare
MMP_RS03965 +0.3 0.8 hypothetical protein compare
MMP_RS03490 +0.3 0.5 DUF2115 domain-containing protein compare
MMP_RS08685 +0.3 1.9 hypothetical protein compare
MMP_RS09050 +0.3 1.1 CAP domain-containing protein compare
MMP_RS07795 +0.3 1.9 site-2 protease family protein compare
MMP_RS02745 +0.3 0.8 hypothetical protein compare
MMP_RS01260 +0.3 1.0 HDIG domain-containing protein compare
MMP_RS01420 +0.3 0.7 hypothetical protein compare
MMP_RS07595 +0.3 1.5 hypothetical protein compare
MMP_RS08080 +0.3 1.2 YchF/TatD family DNA exonuclease compare
MMP_RS05355 +0.3 0.3 hypothetical protein compare
MMP_RS07675 +0.3 2.1 S-layer protein compare
MMP_RS01985 +0.3 1.2 F420-dependent methylenetetrahydromethanopterin dehydrogenase compare
MMP_RS02705 +0.3 1.8 formylmethanofuran dehydrogenase subunit B compare
MMP_RS05900 +0.3 1.4 tetratricopeptide repeat protein compare
MMP_RS05085 +0.3 1.2 AAA family ATPase compare
MMP_RS02370 +0.3 0.9 NifB/NifX family molybdenum-iron cluster-binding protein compare
MMP_RS03230 +0.3 1.1 flavodoxin family protein compare
MMP_RS06150 +0.3 1.8 hypothetical protein compare
MMP_RS01435 +0.3 1.0 DMT family transporter compare
MMP_RS02680 +0.3 1.3 ABC transporter permease compare
MMP_RS00185 +0.3 1.7 potassium channel protein compare
MMP_RS06870 +0.2 1.3 DedA family protein compare
MMP_RS05055 +0.2 1.7 DUF166 domain-containing protein compare
MMP_RS05795 +0.2 1.0 redox-regulated ATPase YchF compare
MMP_RS00760 +0.2 1.1 branched-chain-amino-acid transaminase compare
MMP_RS02755 +0.2 1.8 ABC transporter permease compare
MMP_RS01625 +0.2 1.7 rubredoxin compare
MMP_RS01430 +0.2 0.9 mechanosensitive ion channel family protein compare


Specific Phenotypes

For 2 genes in this experiment

For stress Sodium sulfide nonahydrate in Methanococcus maripaludis S2

For stress Sodium sulfide nonahydrate across organisms