Experiment set9IT008 for Methanococcus maripaludis S2

Compare to:

H2 McCas with 10 mM thiosulfate

200 most important genes:

  gene name fitness t score description  
MMP_RS01385 -5.1 -1.3 imidazole glycerol phosphate synthase subunit HisH compare
MMP_RS00450 -4.1 -3.3 4Fe-4S binding protein compare
MMP_RS07845 -3.6 -2.9 LL-diaminopimelate aminotransferase compare
MMP_RS08790 -3.6 -3.9 translation initiation factor IF-2 subunit alpha compare
MMP_RS00300 -3.5 -1.6 6 7-dimethyl-8-ribityllumazine synthase compare
MMP_RS01175 -3.5 -6.5 triphosphoribosyl-dephospho-CoA synthase compare
MMP_RS08435 -3.4 -5.5 Era-like GTP-binding protein compare
MMP_RS01755 -3.4 -2.2 DUF2097 domain-containing protein compare
MMP_RS02240 -3.3 -5.3 methanogenesis marker 7 protein compare
MMP_RS07635 -3.3 -7.4 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMP_RS06295 -3.2 -9.2 methanogenesis marker 14 protein compare
MMP_RS06315 -3.1 -1.9 cobalt-precorrin-7 (C(5))-methyltransferase compare
MMP_RS08210 -2.9 -3.6 phosphatidylglycerophosphatase A compare
MMP_RS00040 -2.8 -6.0 TIGR03576 family pyridoxal phosphate-dependent enzyme compare
MMP_RS09020 -2.8 -3.5 hypothetical protein compare
MMP_RS05920 -2.8 -1.4 50S ribosomal protein L37e compare
MMP_RS05550 -2.6 -1.3 cation:proton antiporter compare
MMP_RS06730 -2.6 -3.4 phosphopantothenate/pantothenate synthetase compare
MMP_RS01500 -2.6 -3.3 CBS domain-containing protein compare
MMP_RS08635 -2.5 -3.5 UbiA family prenyltransferase compare
MMP_RS02355 -2.4 -5.1 30S ribosomal protein S27ae compare
MMP_RS04890 -2.4 -1.8 adenylyltransferase/cytidyltransferase family protein compare
MMP_RS00305 -2.4 -2.6 phosphoribosyl-ATP diphosphatase compare
MMP_RS03025 -2.4 -7.5 molybdenum cofactor guanylyltransferase compare
MMP_RS03445 -2.3 -1.7 methanogenesis marker 17 protein compare
MMP_RS07545 -2.3 -1.7 HTH domain-containing protein compare
MMP_RS07730 -2.3 -2.1 pyruvate synthase subunit beta compare
MMP_RS03640 -2.3 -5.7 archaeal proteasome endopeptidase complex subunit beta compare
MMP_RS01795 -2.3 -3.2 methanogenesis marker 6 protein compare
MMP_RS02900 -2.2 -1.1 imidazoleglycerol-phosphate dehydratase HisB compare
MMP_RS01265 -2.2 -2.7 hypothetical protein compare
MMP_RS01960 -2.2 -1.9 hypothetical protein compare
MMP_RS07380 -2.2 -4.0 transcription elongation factor Spt5 compare
MMP_RS05515 -2.1 -10.5 cyclic pyranopterin monophosphate synthase MoaC compare
MMP_RS01020 -2.1 -1.9 3 4-dihydroxy-2-butanone-4-phosphate synthase compare
MMP_RS03035 -2.1 -4.8 4-hydroxy-tetrahydrodipicolinate synthase compare
MMP_RS01225 -2.1 -8.2 DUF5379 domain-containing protein compare
MMP_RS07735 -2.1 -1.7 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha compare
MMP_RS06895 -2.1 -2.9 selenocysteine-specific translation elongation factor compare
MMP_RS08720 -2.1 -1.8 4Fe-4S binding protein compare
MMP_RS07605 -2.1 -7.1 diadenylate cyclase compare
MMP_RS02875 -2.1 -11.9 chorismate pyruvate-lyase family protein compare
MMP_RS08300 -2.1 -2.4 metal-sulfur cluster assembly factor compare
MMP_RS05440 -2.1 -12.1 winged helix-turn-helix transcriptional regulator compare
MMP_RS04090 -2.0 -4.6 hypothetical protein compare
MMP_RS07600 -2.0 -2.5 Ni-sirohydrochlorin a c-diamide synthase compare
MMP_RS03475 -2.0 -1.1 hypothetical protein compare
MMP_RS06350 -2.0 -6.5 HesA/MoeB/ThiF family protein compare
MMP_RS01220 -2.0 -10.1 hypothetical protein compare
MMP_RS00110 -2.0 -4.1 hypothetical protein compare
MMP_RS06355 -2.0 -4.6 molybdenum cofactor biosynthesis protein MoaE compare
MMP_RS01890 -1.9 -6.8 nucleotide sugar dehydrogenase compare
MMP_RS06285 -1.9 -3.2 precorrin-6Y C5 15-methyltransferase (decarboxylating) subunit CbiT compare
MMP_RS03580 -1.9 -6.4 signal recognition particle-docking protein FtsY compare
MMP_RS01610 -1.9 -5.5 hypothetical protein compare
MMP_RS03015 -1.9 -9.5 GTP 3' 8-cyclase MoaA compare
MMP_RS04775 -1.9 -4.2 adenosylhomocysteinase compare
MMP_RS07955 -1.9 -8.2 FumA C-terminus/TtdB family hydratase beta subunit compare
MMP_RS03400 -1.9 -3.8 archease compare
MMP_RS01365 -1.9 -3.3 archaeal proteasome endopeptidase complex subunit alpha compare
MMP_RS06625 -1.9 -3.0 DNA primase compare
MMP_RS04780 -1.8 -4.2 ribonuclease P compare
MMP_RS01005 -1.8 -2.5 riboflavin synthase compare
MMP_RS00750 -1.8 -3.1 fumarate hydratase compare
MMP_RS00735 -1.8 -5.7 5 10-methenyltetrahydromethanopterin hydrogenase compare
MMP_RS02010 -1.7 -10.6 PHP domain-containing protein compare
MMP_RS02145 -1.7 -5.9 winged helix-turn-helix transcriptional regulator compare
MMP_RS07200 -1.7 -9.1 [5-(aminomethyl)furan-3-yl]methyl phosphate kinase compare
MMP_RS01800 -1.7 -5.0 TIGR00303 family protein compare
MMP_RS02135 -1.7 -4.3 DUF5612 domain-containing protein compare
MMP_RS00695 -1.7 -1.6 biotin--[acetyl-CoA-carboxylase] ligase compare
MMP_RS03435 -1.7 -2.4 ketol-acid reductoisomerase compare
MMP_RS08650 -1.7 -4.5 glutamine--fructose-6-phosphate transaminase (isomerizing) compare
MMP_RS06925 -1.7 -3.6 ribonuclease VapC4 compare
MMP_RS03155 -1.7 -7.3 precorrin-6A reductase compare
MMP_RS01725 -1.6 -4.2 class I SAM-dependent methyltransferase family protein compare
MMP_RS03140 -1.6 -11.8 hypothetical protein compare
MMP_RS06630 -1.6 -1.8 UPF0058 family protein compare
MMP_RS07555 -1.6 -1.0 monovalent cation/H+ antiporter subunit E compare
MMP_RS05425 -1.6 -5.5 monovalent cation/H+ antiporter complex subunit F compare
MMP_RS05845 -1.6 -2.2 tRNA-intron lyase compare
MMP_RS07750 -1.6 -5.1 DUF357 domain-containing protein compare
MMP_RS06020 -1.5 -5.2 archaeoflavoprotein AfpA compare
MMP_RS06120 -1.5 -3.0 UPF0147 family protein compare
MMP_RS04685 -1.5 -4.9 DUF126 domain-containing protein compare
MMP_RS03960 -1.5 -1.6 hypothetical protein compare
MMP_RS00895 -1.5 -2.7 hypothetical protein compare
MMP_RS04615 -1.5 -3.9 PDGLE domain-containing protein compare
MMP_RS06395 -1.5 -3.2 ThiF family adenylyltransferase compare
MMP_RS07005 -1.5 -1.0 4Fe-4S binding protein compare
MMP_RS01880 -1.5 -7.3 DegT/DnrJ/EryC1/StrS family aminotransferase compare
MMP_RS01885 -1.5 -7.8 Gfo/Idh/MocA family oxidoreductase compare
MMP_RS06370 -1.5 -5.9 biotin synthase BioB compare
MMP_RS01925 -1.5 -8.5 DUF1616 domain-containing protein compare
MMP_RS08165 -1.4 -1.8 phosphoglycerate dehydrogenase compare
MMP_RS01875 -1.4 -6.5 N-acetyltransferase compare
MMP_RS08460 -1.4 -3.4 proteasome-activating nucleotidase compare
MMP_RS04850 -1.4 -10.3 UPF0254 family protein compare
MMP_RS04720 -1.4 -2.9 DedA family protein compare
MMP_RS07700 -1.4 -8.1 DUF1188 domain-containing protein compare
MMP_RS07695 -1.4 -6.8 DUF3236 domain-containing protein compare
MMP_RS07525 -1.3 -5.6 4Fe-4S binding protein compare
MMP_RS00315 -1.3 -5.1 Nif3-like dinuclear metal center hexameric protein compare
MMP_RS08715 -1.3 -1.9 formylmethanofuran dehydrogenase subunit B compare
MMP_RS04500 -1.3 -10.3 adenosylmethionine--8-amino-7-oxononanoate transaminase compare
MMP_RS01475 -1.3 -6.5 phosphosulfolactate synthase compare
MMP_RS03390 -1.3 -5.1 malate dehydrogenase compare
MMP_RS01325 -1.3 -2.9 dihydroneopterin aldolase family protein compare
MMP_RS08745 -1.3 -5.8 CDP-2 3-bis-(O-geranylgeranyl)-sn-glycerol synthase compare
MMP_RS00900 -1.3 -2.2 50S ribosomal protein L39e compare
MMP_RS05555 -1.3 -1.0 DUF4040 domain-containing protein compare
MMP_RS00720 -1.3 -7.2 metal-dependent hydrolase compare
MMP_RS00985 -1.3 -4.8 CDC48 family AAA ATPase compare
MMP_RS03315 -1.2 -1.3 ferrous iron transport protein A compare
MMP_RS03485 -1.2 -3.8 TIGR00267 family protein compare
MMP_RS03600 -1.2 -2.8 triose-phosphate isomerase compare
MMP_RS07390 -1.2 -1.7 cell division protein FtsZ compare
MMP_RS01900 -1.2 -7.8 hypothetical protein compare
MMP_RS01665 -1.2 -2.3 DUF2111 domain-containing protein compare
MMP_RS05450 -1.2 -2.9 CoB--CoM heterodisulfide reductase subunit C compare
MMP_RS05765 -1.2 -7.5 M42 family metallopeptidase compare
MMP_RS07755 -1.2 -1.7 DUF555 domain-containing protein compare
MMP_RS04710 -1.2 -2.3 hypothetical protein compare
MMP_RS02175 -1.2 -1.0 DUF1611 domain-containing protein compare
MMP_RS05815 -1.2 -1.9 NOL1/NOP2/sun family putative RNA methylase compare
MMP_RS08095 -1.2 -7.0 dethiobiotin synthase compare
MMP_RS05925 -1.2 -5.1 small nuclear ribonucleoprotein compare
MMP_RS06105 -1.2 -5.7 hydrogenase maturation peptidase HycI compare
MMP_RS03145 -1.2 -6.5 fibrillarin-like rRNA/tRNA 2'-O-methyltransferase compare
MMP_RS06865 -1.1 -1.7 HypC/HybG/HupF family hydrogenase formation chaperone compare
MMP_RS00455 -1.1 -7.5 orotate phosphoribosyltransferase-like protein compare
MMP_RS06110 -1.1 -3.0 ATP-dependent protease LonB compare
MMP_RS01915 -1.1 -8.3 DUF354 domain-containing protein compare
MMP_RS01905 -1.1 -7.0 glycosyltransferase compare
MMP_RS00130 -1.1 -1.4 nickel-responsive transcriptional regulator NikR compare
MMP_RS07190 -1.1 -5.2 chromosome segregation protein SMC compare
MMP_RS01830 -1.0 -1.6 tRNA-Val compare
MMP_RS02800 -1.0 -3.1 nucleotidyltransferase domain-containing protein compare
MMP_RS01955 -1.0 -2.0 hypothetical protein compare
MMP_RS00730 -1.0 -3.1 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdB compare
MMP_RS02195 -1.0 -2.3 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase compare
MMP_RS01750 -1.0 -5.4 DUF63 family protein compare
MMP_RS08820 -1.0 -3.9 hypothetical protein compare
MMP_RS00725 -1.0 -4.4 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdC compare
MMP_RS06400 -1.0 -0.8 4Fe-4S binding protein compare
MMP_RS06270 -1.0 -3.9 TIGR00300 family protein compare
MMP_RS06885 -1.0 -2.4 50S ribosome-binding GTPase compare
MMP_RS01920 -1.0 -7.6 glycosyltransferase family 2 protein compare
MMP_RS07875 -1.0 -4.4 hypothetical protein compare
MMP_RS01575 -1.0 -5.9 aldolase compare
MMP_RS06980 -0.9 -5.4 tRNA 2-thiocytidine biosynthesis TtcA family protein compare
MMP_RS04695 -0.9 -3.5 selenide water dikinase SelD compare
MMP_RS05445 -0.9 -5.9 CoB--CoM heterodisulfide reductase subunit B compare
MMP_RS08330 -0.9 -3.7 NADH-quinone oxidoreductase subunit H compare
MMP_RS08100 -0.9 -5.2 8-amino-7-oxononanoate synthase compare
MMP_RS01600 -0.9 -1.9 50S ribosomal protein L15e compare
MMP_RS05540 -0.9 -2.9 hypothetical protein compare
MMP_RS07540 -0.9 -3.1 CBS domain-containing protein compare
MMP_RS07790 -0.9 -5.1 segregation/condensation protein A compare
MMP_RS07445 -0.9 -3.2 helix-turn-helix domain-containing protein compare
MMP_RS05245 -0.8 -6.3 archaeosine biosynthesis radical SAM protein RaSEA compare
MMP_RS00685 -0.8 -3.1 2-phospho-L-lactate guanylyltransferase compare
MMP_RS07575 -0.8 -2.5 RNA ligase partner protein compare
MMP_RS03590 -0.8 -3.2 METTL5 family protein compare
MMP_RS06940 -0.8 -2.1 polyprenyl diphosphate synthase compare
MMP_RS06215 -0.8 -2.7 30S ribosomal protein S6e compare
MMP_RS03205 -0.8 -1.4 peptidyl-tRNA hydrolase Pth2 compare
MMP_RS07385 -0.8 -1.5 protein translocase SEC61 complex subunit gamma compare
MMP_RS03095 -0.8 -5.0 diphthine synthase compare
MMP_RS06900 -0.8 -2.8 coenzyme F420-reducing hydrogenase FrhD protein compare
MMP_RS00515 -0.8 -1.0 DUF655 domain-containing protein compare
MMP_RS08320 -0.8 -3.3 molybdopterin molybdotransferase MoeA compare
MMP_RS01745 -0.8 -4.5 AMP phosphorylase compare
MMP_RS01975 -0.8 -6.5 hypothetical protein compare
MMP_RS06310 -0.7 -2.3 NAD(P)/FAD-dependent oxidoreductase compare
MMP_RS08070 -0.7 -4.7 DUF2096 domain-containing protein compare
MMP_RS08915 -0.7 -2.7 2 5-diamino-6-(ribosylamino)-4(3H)-pyrimidinone 5'-phosphate reductase compare
MMP_RS04360 -0.7 -2.0 hypothetical protein compare
MMP_RS01910 -0.7 -4.4 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
MMP_RS06555 -0.7 -1.2 cupin domain-containing protein compare
MMP_RS06675 -0.7 -4.5 ADP-specific phosphofructokinase compare
MMP_RS03250 -0.7 -1.2 MJ1244 family protein compare
MMP_RS07725 -0.7 -2.2 4Fe-4S dicluster domain-containing protein compare
MMP_RS08195 -0.7 -4.5 hypothetical protein compare
MMP_RS01940 -0.7 -2.5 MoxR family ATPase compare
MMP_RS08785 -0.7 -1.0 RNA-protein complex protein Nop10 compare
MMP_RS00050 -0.6 -3.9 AarF/UbiB family protein compare
MMP_RS06175 -0.6 -2.9 winged helix-turn-helix transcriptional regulator compare
MMP_RS04900 -0.6 -5.6 hypothetical protein compare
MMP_RS07420 -0.6 -1.7 metalloregulator ArsR/SmtB family transcription factor compare
MMP_RS02340 -0.6 -0.9 DNA-directed RNA polymerase subunit E'' compare
MMP_RS01935 -0.6 -4.0 DUF58 domain-containing protein compare
MMP_RS07180 -0.6 -3.4 DEAD/DEAH box helicase compare
MMP_RS07860 -0.6 -0.5 hypothetical protein compare
MMP_RS00620 -0.6 -3.2 4Fe-4S binding protein compare
MMP_RS04875 -0.6 -2.2 energy-converting hydrogenase B subunit P compare
MMP_RS02235 -0.5 -3.9 CBS domain-containing protein compare
MMP_RS08105 -0.5 -3.0 6-carboxyhexanoate--CoA ligase compare
MMP_RS08350 -0.5 -0.7 hypothetical protein compare
MMP_RS01840 -0.5 -3.6 TIGR00289 family protein compare


Specific Phenotypes

For 3 genes in this experiment

For stress Sodium thiosulfate in Methanococcus maripaludis S2

For stress Sodium thiosulfate across organisms