Experiment set9IT007 for Methanococcus maripaludis S2

Compare to:

H2 McCas with 10 mM thiosulfate

200 most detrimental genes:

  gene name fitness t score description  
MMP_RS06480 +3.7 18.6 ABC transporter substrate-binding protein compare
MMP_RS07630 +3.7 11.9 ATP-binding cassette domain-containing protein compare
MMP_RS07615 +3.6 22.0 energy-coupling factor ABC transporter permease compare
MMP_RS06165 +3.5 18.3 ABC transporter permease compare
MMP_RS07625 +3.4 13.0 cobalt ECF transporter T component CbiQ compare
MMP_RS06170 +3.2 22.2 ABC transporter ATP-binding protein compare
MMP_RS07620 +3.1 12.7 energy-coupling factor ABC transporter substrate-binding protein compare
MMP_RS07705 +2.9 21.9 transcriptional regulator compare
MMP_RS00810 +2.7 7.6 topoisomerase DNA-binding C4 zinc finger domain-containing protein compare
MMP_RS07710 +2.4 12.4 cell division protein FtsZ compare
MMP_RS00915 +2.3 11.3 DUF116 domain-containing protein compare
MMP_RS08445 +1.9 3.4 DUF2099 family protein compare
MMP_RS03110 +1.7 5.5 glycosyltransferase family 2 protein compare
MMP_RS06290 +1.6 5.7 DNA repair and recombination protein RadA compare
MMP_RS05295 +1.5 11.7 minichromosome maintenance protein MCM compare
MMP_RS08440 +1.5 2.0 cell division protein SepF compare
MMP_RS01775 +1.0 4.3 TIGR00297 family protein compare
MMP_RS07820 +1.0 4.7 UPF0104 family protein compare
MMP_RS08660 +0.9 5.1 DHH family phosphoesterase compare
MMP_RS08615 +0.9 2.1 flagellar protein G compare
MMP_RS03305 +0.8 5.4 winged helix-turn-helix domain-containing protein compare
MMP_RS00910 +0.8 3.8 2-phosphosulfolactate phosphatase compare
MMP_RS03245 +0.8 2.9 DNA repair and recombination protein RadB compare
MMP_RS06600 +0.8 2.2 class III signal peptide-containing protein compare
MMP_RS08265 +0.8 4.1 rubrerythrin compare
MMP_RS08675 +0.7 2.5 class III signal peptide-containing protein compare
MMP_RS07365 +0.7 5.8 2-phosphoglycerate kinase compare
MMP_RS06840 +0.7 1.0 DNA-directed RNA polymerase subunit N compare
MMP_RS08705 +0.7 4.6 sulfopyruvate decarboxylase subunit beta compare
MMP_RS08940 +0.7 1.4 MetS family NSS transporter small subunit compare
MMP_RS06015 +0.6 2.9 flavodoxin family protein compare
MMP_RS08860 +0.6 3.7 MinD/ParA family protein compare
MMP_RS01460 +0.6 2.6 hypothetical protein compare
MMP_RS08580 +0.6 3.6 flagellin compare
MMP_RS05250 +0.6 1.4 NFYB/HAP3 family transcription factor subunit compare
MMP_RS06130 +0.6 1.6 peptidylprolyl isomerase compare
MMP_RS08310 +0.5 1.7 TMEM165/GDT1 family protein compare
MMP_RS00080 +0.5 1.7 RecB-family nuclease compare
MMP_RS05985 +0.5 2.3 hypothetical protein compare
MMP_RS08400 +0.5 1.9 MJ0307 family thioredoxin compare
MMP_RS08855 +0.5 3.3 hypothetical protein compare
MMP_RS00660 +0.5 4.1 alkaline phosphatase family protein compare
MMP_RS05355 +0.5 0.8 hypothetical protein compare
MMP_RS00345 +0.5 3.0 DUF2666 domain-containing protein compare
MMP_RS04060 +0.5 2.0 hypothetical protein compare
MMP_RS07685 +0.5 2.8 TIGR01212 family radical SAM protein compare
MMP_RS07860 +0.5 0.5 hypothetical protein compare
MMP_RS01285 +0.5 3.8 hypothetical protein compare
MMP_RS03625 +0.5 3.1 cell wall-binding protein compare
MMP_RS05865 +0.4 1.4 hypothetical protein compare
MMP_RS03340 +0.4 0.6 ABC transporter ATP-binding protein compare
MMP_RS00655 +0.4 1.9 hypothetical protein compare
MMP_RS01290 +0.4 3.5 class III signal peptide-containing protein compare
MMP_RS04650 +0.4 2.2 tetratricopeptide repeat protein compare
MMP_RS01110 +0.4 2.1 FmdE family protein compare
MMP_RS08750 +0.4 1.9 hypothetical protein compare
MMP_RS04030 +0.4 2.0 hypothetical protein compare
MMP_RS00535 +0.4 1.5 TIGR00375 family protein compare
MMP_RS02295 +0.4 3.0 TatD family hydrolase compare
MMP_RS08770 +0.4 3.3 hypothetical protein compare
MMP_RS01370 +0.4 3.2 acetate--CoA ligase family protein compare
MMP_RS01465 +0.4 1.0 hypothetical protein compare
MMP_RS01965 +0.4 2.6 DUF1616 domain-containing protein compare
MMP_RS03300 +0.4 0.5 TOBE domain-containing protein compare
MMP_RS01275 +0.4 2.8 class III signal peptide-containing protein compare
MMP_RS04145 +0.4 1.0 hypothetical protein compare
MMP_RS07775 +0.4 1.5 alanine dehydrogenase compare
MMP_RS00675 +0.4 0.5 nitroreductase family protein compare
MMP_RS07550 +0.4 2.9 L-serine ammonia-lyase iron-sulfur-dependent subunit alpha compare
MMP_RS07900 +0.4 1.7 YeeE/YedE family protein compare
MMP_RS05795 +0.4 2.2 redox-regulated ATPase YchF compare
MMP_RS02790 +0.4 0.7 class III signal peptide-containing protein compare
MMP_RS01525 +0.4 1.2 nucleoside-diphosphate kinase compare
MMP_RS08290 +0.4 2.2 DNA-binding protein Alba compare
MMP_RS03450 +0.4 1.4 glycine synthesis protein GlyXS (from data) compare
MMP_RS01310 +0.4 3.3 hypothetical protein compare
MMP_RS00245 +0.4 3.3 type II secretion system F family protein compare
MMP_RS03535 +0.4 0.8 helix-turn-helix transcriptional regulator compare
MMP_RS01085 +0.4 1.1 hypothetical protein compare
MMP_RS01295 +0.4 2.7 hypothetical protein compare
MMP_RS06300 +0.4 2.7 ABC transporter substrate-binding protein compare
MMP_RS07765 +0.4 2.1 sodium:alanine symporter family protein compare
MMP_RS06910 +0.4 2.6 RlmF-related methyltransferase compare
MMP_RS03065 +0.4 1.3 AzlC family ABC transporter permease compare
MMP_RS01305 +0.4 3.3 hypothetical protein compare
MMP_RS06540 +0.4 1.3 3-methyl-2-oxobutanoate dehydrogenase subunit VorB compare
MMP_RS07095 +0.4 1.4 PspC domain-containing protein compare
MMP_RS07560 +0.3 2.0 prefoldin subunit alpha compare
MMP_RS05620 +0.3 3.0 radical SAM protein compare
MMP_RS02545 +0.3 1.5 hypothetical protein compare
MMP_RS01630 +0.3 2.6 N-glycosylase/DNA lyase compare
MMP_RS06715 +0.3 2.9 cache domain-containing protein compare
MMP_RS07415 +0.3 1.8 molybdopterin-guanine dinucleotide biosynthesis protein MobB compare
MMP_RS07910 +0.3 1.7 NAD(P)H-hydrate dehydratase compare
MMP_RS07915 +0.3 1.8 DUF4870 domain-containing protein compare
MMP_RS01270 +0.3 2.9 prepilin peptidase compare
MMP_RS01470 +0.3 1.1 ATP-binding cassette domain-containing protein compare
MMP_RS01570 +0.3 0.8 hypothetical protein compare
MMP_RS08315 +0.3 1.1 S-methyl-5-thioribose-1-phosphate isomerase compare
MMP_RS08555 +0.3 1.7 hypothetical protein compare
MMP_RS07335 +0.3 1.2 tRNA (cytidine(56)-2'-O)-methyltransferase compare
MMP_RS08665 +0.3 2.9 hypothetical protein compare
MMP_RS07345 +0.3 2.0 glycine synthesis protein GlyXL (from data) compare
MMP_RS08240 +0.3 1.9 methanogenesis marker 16 metalloprotein compare
MMP_RS08395 +0.3 1.7 DsrE family protein compare
MMP_RS06720 +0.3 2.4 response regulator transcription factor compare
MMP_RS06520 +0.3 1.2 DUF1786 domain-containing protein compare
MMP_RS05560 +0.3 1.7 deoxyuridine 5'-triphosphate nucleotidohydrolase compare
MMP_RS00855 +0.3 2.0 DUF367 family protein compare
MMP_RS00250 +0.3 2.5 Flp pilus assembly complex ATPase component TadA compare
MMP_RS00530 +0.3 2.0 tRNA pseudouridine(54/55) synthase Pus10 compare
MMP_RS01280 +0.3 2.7 DUF515 domain-containing protein compare
MMP_RS08080 +0.3 2.3 YchF/TatD family DNA exonuclease compare
MMP_RS03550 +0.3 1.0 DUF2124 domain-containing protein compare
MMP_RS00240 +0.3 2.3 type II secretion system F family protein compare
MMP_RS01545 +0.3 0.6 CBS domain-containing protein compare
MMP_RS02045 +0.3 0.7 tRNA-Met compare
MMP_RS05850 +0.3 1.2 Ldh family oxidoreductase compare
MMP_RS05110 +0.3 1.5 16S ribosomal RNA methyltransferase A compare
MMP_RS02495 +0.3 0.8 hypothetical protein compare
MMP_RS08830 +0.3 1.6 GTP-binding protein compare
MMP_RS05435 +0.3 1.9 5'/3'-nucleotidase SurE compare
MMP_RS02510 +0.3 2.0 site-specific integrase compare
MMP_RS04190 +0.3 1.3 hypothetical protein compare
MMP_RS07805 +0.3 2.0 ABC transporter permease compare
MMP_RS01635 +0.3 1.7 thiamine pyrophosphate-dependent enzyme compare
MMP_RS06990 +0.3 1.3 CatB-related O-acetyltransferase compare
MMP_RS08480 +0.3 2.0 molybdate ABC transporter substrate-binding protein compare
MMP_RS04050 +0.3 1.4 hypothetical protein compare
MMP_RS02605 +0.3 0.3 MotA/TolQ/ExbB proton channel family protein compare
MMP_RS06590 +0.3 0.8 GNAT family N-acetyltransferase compare
MMP_RS08610 +0.3 2.1 flagellar protein F compare
MMP_RS05545 +0.3 1.6 pyridoxal phosphate-dependent aminotransferase compare
MMP_RS00545 +0.3 1.4 XRE family transcriptional regulator compare
MMP_RS06460 +0.3 1.9 pyrimidine dimer DNA glycosylase/endonuclease V compare
MMP_RS06325 +0.3 0.6 hypothetical protein compare
MMP_RS01315 +0.3 2.4 DUF2341 domain-containing protein compare
MMP_RS03220 +0.3 0.8 RNA 2' 3'-cyclic phosphodiesterase compare
MMP_RS05715 +0.3 1.8 hypothetical protein compare
MMP_RS06445 +0.3 1.5 DUF89 domain-containing protein compare
MMP_RS05430 +0.3 1.6 TIGR00288 family NYN domain-containing protein compare
MMP_RS07120 +0.3 1.8 coenzyme F420 hydrogenase subunit alpha compare
MMP_RS03150 +0.2 2.0 phosphoglycerate mutase compare
MMP_RS04020 +0.2 1.3 hypothetical protein compare
MMP_RS04100 +0.2 1.1 hypothetical protein compare
MMP_RS03780 +0.2 1.5 4Fe-4S binding protein compare
MMP_RS02765 +0.2 0.9 ABC transporter ATP-binding protein compare
MMP_RS06145 +0.2 2.3 hypothetical protein compare
MMP_RS08835 +0.2 1.7 H(2)-dependent methylenetetrahydromethanopterin dehydrogenase-related protein compare
MMP_RS08250 +0.2 1.8 pyruvate kinase compare
MMP_RS08850 +0.2 2.1 hypothetical protein compare
MMP_RS00390 +0.2 1.6 ammonium transporter compare
MMP_RS05500 +0.2 1.5 2-isopropylmalate synthase compare
MMP_RS05820 +0.2 1.8 RNA-binding transcriptional accessory protein compare
MMP_RS04185 +0.2 1.9 aldo/keto reductase compare
MMP_RS04730 +0.2 1.8 flavodoxin family protein compare
MMP_RS02020 +0.2 1.0 gamma-glutamylcyclotransferase compare
MMP_RS00690 +0.2 1.4 MBL fold metallo-hydrolase compare
MMP_RS03060 +0.2 1.4 MBL fold metallo-hydrolase compare
MMP_RS07130 +0.2 1.7 coenzyme F420 hydrogenase subunit gamma compare
MMP_RS08410 +0.2 0.8 DUF169 domain-containing protein compare
MMP_RS00710 +0.2 1.4 hypothetical protein compare
MMP_RS09050 +0.2 0.9 CAP domain-containing protein compare
MMP_RS01655 +0.2 0.8 DsrE family protein compare
MMP_RS09060 +0.2 1.5 hypothetical protein compare
MMP_RS06150 +0.2 1.9 hypothetical protein compare
MMP_RS00905 +0.2 1.1 phenylacetate--CoA ligase compare
MMP_RS08390 +0.2 1.2 DUF5400 domain-containing protein compare
MMP_RS00435 +0.2 1.9 CPBP family intramembrane metalloprotease compare
MMP_RS04610 +0.2 1.4 Dabb family protein compare
MMP_RS04520 +0.2 1.2 nucleoside deaminase compare
MMP_RS02470 +0.2 0.5 helix-turn-helix transcriptional regulator compare
MMP_RS03845 +0.2 1.5 DNA adenine methylase compare
MMP_RS02595 +0.2 0.4 putative zinc-binding protein compare
MMP_RS02680 +0.2 1.0 ABC transporter permease compare
MMP_RS02375 +0.2 1.5 hypothetical protein compare
MMP_RS02920 +0.2 1.8 DMT family transporter compare
MMP_RS01145 +0.2 1.4 ABC transporter ATP-binding protein compare
MMP_RS01490 +0.2 1.5 tetratricopeptide repeat protein compare
MMP_RS06335 +0.2 1.0 HAD family hydrolase compare
MMP_RS07155 +0.2 1.2 MFS transporter compare
MMP_RS08600 +0.2 0.5 flagellar protein D compare
MMP_RS01855 +0.2 1.4 2-hydroxyacyl-CoA dehydratase family protein compare
MMP_RS02935 +0.2 1.0 A24 family peptidase compare
MMP_RS02540 +0.2 1.3 DUF2283 domain-containing protein compare
MMP_RS00705 +0.2 0.4 hypothetical protein compare
MMP_RS04530 +0.2 1.5 ABC transporter permease compare
MMP_RS05680 +0.2 1.4 phosphate signaling complex protein PhoU compare
MMP_RS01250 +0.2 0.9 tRNA (guanine(26)-N(2))-dimethyltransferase compare
MMP_RS00825 +0.2 1.2 fumarylacetoacetate hydrolase family protein compare
MMP_RS02530 +0.2 1.2 type II toxin-antitoxin system mRNA interferase toxin RelE/StbE family compare
MMP_RS00430 +0.2 1.0 hypothetical protein compare
MMP_RS08285 +0.2 1.5 serine/threonine protein kinase compare
MMP_RS08475 +0.2 1.0 ABC transporter permease compare
MMP_RS02835 +0.2 1.0 CGGC domain-containing protein compare
MMP_RS05780 +0.2 1.3 multidrug resistance efflux transporter family protein compare
MMP_RS02455 +0.2 1.2 hypothetical protein compare
MMP_RS08215 +0.2 1.1 DUF483 domain-containing protein compare
MMP_RS04790 +0.2 1.5 4-hydroxy-tetrahydrodipicolinate reductase compare
MMP_RS08945 +0.2 1.5 hypothetical protein compare


Specific Phenotypes

For 3 genes in this experiment

For stress Sodium thiosulfate in Methanococcus maripaludis S2

For stress Sodium thiosulfate across organisms