Experiment set9IT006 for Methanococcus maripaludis S2

Compare to:

H2 McCas with 0.1 mM sulfite

200 most important genes:

  gene name fitness t score description  
MMP_RS03475 -5.4 -1.3 hypothetical protein compare
MMP_RS08300 -5.0 -2.8 metal-sulfur cluster assembly factor compare
MMP_RS07845 -4.9 -3.5 LL-diaminopimelate aminotransferase compare
MMP_RS06400 -4.7 -2.4 4Fe-4S binding protein compare
MMP_RS08435 -4.7 -4.6 Era-like GTP-binding protein compare
MMP_RS03315 -4.4 -2.2 ferrous iron transport protein A compare
MMP_RS06355 -4.3 -4.8 molybdenum cofactor biosynthesis protein MoaE compare
MMP_RS07755 -4.0 -2.5 DUF555 domain-containing protein compare
MMP_RS01175 -3.9 -8.1 triphosphoribosyl-dephospho-CoA synthase compare
MMP_RS06120 -3.8 -3.5 UPF0147 family protein compare
MMP_RS03035 -3.7 -6.2 4-hydroxy-tetrahydrodipicolinate synthase compare
MMP_RS06350 -3.6 -8.9 HesA/MoeB/ThiF family protein compare
MMP_RS03960 -3.6 -2.1 hypothetical protein compare
MMP_RS00450 -3.6 -3.4 4Fe-4S binding protein compare
MMP_RS08790 -3.5 -4.2 translation initiation factor IF-2 subunit alpha compare
MMP_RS00040 -3.5 -7.5 TIGR03576 family pyridoxal phosphate-dependent enzyme compare
MMP_RS01385 -3.4 -1.4 imidazole glycerol phosphate synthase subunit HisH compare
MMP_RS08720 -3.3 -2.9 4Fe-4S binding protein compare
MMP_RS01880 -3.3 -11.5 DegT/DnrJ/EryC1/StrS family aminotransferase compare
MMP_RS01890 -3.3 -6.5 nucleotide sugar dehydrogenase compare
MMP_RS07635 -3.3 -8.0 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMP_RS05515 -3.2 -9.2 cyclic pyranopterin monophosphate synthase MoaC compare
MMP_RS07730 -3.2 -2.5 pyruvate synthase subunit beta compare
MMP_RS00305 -3.2 -3.5 phosphoribosyl-ATP diphosphatase compare
MMP_RS03015 -3.2 -12.0 GTP 3' 8-cyclase MoaA compare
MMP_RS02010 -3.1 -12.1 PHP domain-containing protein compare
MMP_RS01875 -3.0 -15.2 N-acetyltransferase compare
MMP_RS00110 -3.0 -6.4 hypothetical protein compare
MMP_RS06625 -3.0 -3.0 DNA primase compare
MMP_RS01325 -3.0 -3.9 dihydroneopterin aldolase family protein compare
MMP_RS08745 -2.9 -8.0 CDP-2 3-bis-(O-geranylgeranyl)-sn-glycerol synthase compare
MMP_RS00515 -2.9 -2.2 DUF655 domain-containing protein compare
MMP_RS07750 -2.9 -10.8 DUF357 domain-containing protein compare
MMP_RS01885 -2.8 -14.8 Gfo/Idh/MocA family oxidoreductase compare
MMP_RS08650 -2.8 -6.5 glutamine--fructose-6-phosphate transaminase (isomerizing) compare
MMP_RS09020 -2.8 -3.2 hypothetical protein compare
MMP_RS02145 -2.8 -10.9 winged helix-turn-helix transcriptional regulator compare
MMP_RS06295 -2.8 -9.8 methanogenesis marker 14 protein compare
MMP_RS08820 -2.7 -7.3 hypothetical protein compare
MMP_RS01020 -2.7 -2.1 3 4-dihydroxy-2-butanone-4-phosphate synthase compare
MMP_RS08715 -2.7 -3.1 formylmethanofuran dehydrogenase subunit B compare
MMP_RS05550 -2.7 -1.4 cation:proton antiporter compare
MMP_RS04090 -2.7 -5.9 hypothetical protein compare
MMP_RS03435 -2.7 -3.0 ketol-acid reductoisomerase compare
MMP_RS04890 -2.7 -2.0 adenylyltransferase/cytidyltransferase family protein compare
MMP_RS04685 -2.7 -5.1 DUF126 domain-containing protein compare
MMP_RS07605 -2.7 -4.5 diadenylate cyclase compare
MMP_RS00895 -2.7 -6.7 hypothetical protein compare
MMP_RS03400 -2.7 -5.5 archease compare
MMP_RS06630 -2.6 -2.1 UPF0058 family protein compare
MMP_RS03580 -2.6 -5.1 signal recognition particle-docking protein FtsY compare
MMP_RS01725 -2.6 -5.0 class I SAM-dependent methyltransferase family protein compare
MMP_RS03700 -2.6 -10.8 sodium:proton antiporter compare
MMP_RS04720 -2.6 -4.6 DedA family protein compare
MMP_RS06285 -2.6 -3.7 precorrin-6Y C5 15-methyltransferase (decarboxylating) subunit CbiT compare
MMP_RS07580 -2.6 -6.5 DUF356 domain-containing protein compare
MMP_RS02355 -2.6 -4.8 30S ribosomal protein S27ae compare
MMP_RS06315 -2.6 -2.0 cobalt-precorrin-7 (C(5))-methyltransferase compare
MMP_RS01545 -2.6 -2.4 CBS domain-containing protein compare
MMP_RS00735 -2.6 -5.9 5 10-methenyltetrahydromethanopterin hydrogenase compare
MMP_RS05250 -2.5 -3.7 NFYB/HAP3 family transcription factor subunit compare
MMP_RS01755 -2.5 -2.6 DUF2097 domain-containing protein compare
MMP_RS06885 -2.5 -4.6 50S ribosome-binding GTPase compare
MMP_RS02875 -2.4 -11.3 chorismate pyruvate-lyase family protein compare
MMP_RS02240 -2.4 -5.9 methanogenesis marker 7 protein compare
MMP_RS00695 -2.4 -1.9 biotin--[acetyl-CoA-carboxylase] ligase compare
MMP_RS01265 -2.4 -4.8 hypothetical protein compare
MMP_RS04710 -2.4 -3.2 hypothetical protein compare
MMP_RS01225 -2.4 -7.4 DUF5379 domain-containing protein compare
MMP_RS01005 -2.4 -2.8 riboflavin synthase compare
MMP_RS05920 -2.4 -1.4 50S ribosomal protein L37e compare
MMP_RS01610 -2.3 -5.9 hypothetical protein compare
MMP_RS08210 -2.3 -4.0 phosphatidylglycerophosphatase A compare
MMP_RS03025 -2.3 -6.6 molybdenum cofactor guanylyltransferase compare
MMP_RS03640 -2.3 -5.6 archaeal proteasome endopeptidase complex subunit beta compare
MMP_RS02195 -2.3 -6.3 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase compare
MMP_RS01925 -2.3 -11.7 DUF1616 domain-containing protein compare
MMP_RS06900 -2.3 -4.7 coenzyme F420-reducing hydrogenase FrhD protein compare
MMP_RS03600 -2.3 -2.8 triose-phosphate isomerase compare
MMP_RS08440 -2.3 -4.7 cell division protein SepF compare
MMP_RS06020 -2.3 -5.5 archaeoflavoprotein AfpA compare
MMP_RS01500 -2.3 -3.0 CBS domain-containing protein compare
MMP_RS04775 -2.2 -5.2 adenosylhomocysteinase compare
MMP_RS01900 -2.2 -14.0 hypothetical protein compare
MMP_RS01220 -2.2 -9.7 hypothetical protein compare
MMP_RS02800 -2.2 -6.1 nucleotidyltransferase domain-containing protein compare
MMP_RS04780 -2.2 -3.9 ribonuclease P compare
MMP_RS08635 -2.2 -3.2 UbiA family prenyltransferase compare
MMP_RS06925 -2.2 -3.9 ribonuclease VapC4 compare
MMP_RS07390 -2.2 -3.2 cell division protein FtsZ compare
MMP_RS00900 -2.2 -3.2 50S ribosomal protein L39e compare
MMP_RS07005 -2.2 -1.2 4Fe-4S binding protein compare
MMP_RS01905 -2.1 -13.6 glycosyltransferase compare
MMP_RS06230 -2.1 -4.5 helix-turn-helix domain-containing protein compare
MMP_RS06980 -2.1 -8.6 tRNA 2-thiocytidine biosynthesis TtcA family protein compare
MMP_RS04500 -2.1 -15.4 adenosylmethionine--8-amino-7-oxononanoate transaminase compare
MMP_RS07700 -2.1 -11.2 DUF1188 domain-containing protein compare
MMP_RS01955 -2.1 -5.1 hypothetical protein compare
MMP_RS07695 -2.1 -7.7 DUF3236 domain-containing protein compare
MMP_RS08165 -2.1 -2.8 phosphoglycerate dehydrogenase compare
MMP_RS05425 -2.0 -4.2 monovalent cation/H+ antiporter complex subunit F compare
MMP_RS07200 -2.0 -8.0 [5-(aminomethyl)furan-3-yl]methyl phosphate kinase compare
MMP_RS02135 -2.0 -5.6 DUF5612 domain-containing protein compare
MMP_RS00315 -2.0 -9.5 Nif3-like dinuclear metal center hexameric protein compare
MMP_RS02280 -2.0 -1.3 DUF211 domain-containing protein compare
MMP_RS03155 -2.0 -10.0 precorrin-6A reductase compare
MMP_RS04850 -2.0 -14.9 UPF0254 family protein compare
MMP_RS00300 -2.0 -1.4 6 7-dimethyl-8-ribityllumazine synthase compare
MMP_RS01365 -2.0 -3.8 archaeal proteasome endopeptidase complex subunit alpha compare
MMP_RS05580 -1.9 -14.3 glycosyltransferase compare
MMP_RS00730 -1.9 -7.4 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdB compare
MMP_RS06940 -1.9 -3.8 polyprenyl diphosphate synthase compare
MMP_RS01700 -1.9 -1.8 dihydroxy-acid dehydratase compare
MMP_RS05640 -1.9 -7.6 UTP--glucose-1-phosphate uridylyltransferase GalU compare
MMP_RS06340 -1.9 -10.0 phosphoadenosine phosphosulfate reductase family protein compare
MMP_RS06395 -1.9 -4.5 ThiF family adenylyltransferase compare
MMP_RS06475 -1.9 -6.8 FAD-dependent oxidoreductase compare
MMP_RS07525 -1.9 -7.8 4Fe-4S binding protein compare
MMP_RS01380 -1.9 -8.2 PHP domain-containing protein compare
MMP_RS01800 -1.9 -5.4 TIGR00303 family protein compare
MMP_RS05440 -1.9 -12.7 winged helix-turn-helix transcriptional regulator compare
MMP_RS00685 -1.8 -4.2 2-phospho-L-lactate guanylyltransferase compare
MMP_RS04615 -1.8 -5.4 PDGLE domain-containing protein compare
MMP_RS07545 -1.8 -1.9 HTH domain-containing protein compare
MMP_RS05540 -1.8 -3.5 hypothetical protein compare
MMP_RS07955 -1.8 -8.2 FumA C-terminus/TtdB family hydratase beta subunit compare
MMP_RS03145 -1.8 -7.6 fibrillarin-like rRNA/tRNA 2'-O-methyltransferase compare
MMP_RS00810 -1.8 -7.7 topoisomerase DNA-binding C4 zinc finger domain-containing protein compare
MMP_RS05815 -1.8 -3.3 NOL1/NOP2/sun family putative RNA methylase compare
MMP_RS05555 -1.8 -2.1 DUF4040 domain-containing protein compare
MMP_RS07075 -1.8 -4.3 phosphomannomutase/phosphoglucomutase compare
MMP_RS06895 -1.7 -2.1 selenocysteine-specific translation elongation factor compare
MMP_RS06370 -1.7 -5.3 biotin synthase BioB compare
MMP_RS03445 -1.7 -1.6 methanogenesis marker 17 protein compare
MMP_RS07380 -1.7 -4.5 transcription elongation factor Spt5 compare
MMP_RS06670 -1.7 -5.7 glucose-6-phosphate isomerase compare
MMP_RS08095 -1.7 -8.3 dethiobiotin synthase compare
MMP_RS05845 -1.7 -2.8 tRNA-intron lyase compare
MMP_RS00750 -1.7 -3.2 fumarate hydratase compare
MMP_RS07330 -1.7 -13.8 membrane protein compare
MMP_RS06270 -1.7 -5.0 TIGR00300 family protein compare
MMP_RS05265 -1.7 -3.1 2-isopropylmalate synthase compare
MMP_RS00060 -1.7 -1.8 3-dehydroquinate synthase II compare
MMP_RS00985 -1.7 -7.9 CDC48 family AAA ATPase compare
MMP_RS02900 -1.7 -1.0 imidazoleglycerol-phosphate dehydratase HisB compare
MMP_RS01830 -1.6 -2.5 tRNA-Val compare
MMP_RS06105 -1.6 -8.2 hydrogenase maturation peptidase HycI compare
MMP_RS03140 -1.6 -10.3 hypothetical protein compare
MMP_RS01910 -1.6 -10.1 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
MMP_RS00725 -1.6 -6.5 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdC compare
MMP_RS00115 -1.6 -10.9 radical SAM protein compare
MMP_RS07540 -1.6 -3.9 CBS domain-containing protein compare
MMP_RS06215 -1.6 -3.6 30S ribosomal protein S6e compare
MMP_RS05635 -1.6 -8.9 NAD-dependent epimerase/dehydratase family protein compare
MMP_RS03390 -1.6 -6.8 malate dehydrogenase compare
MMP_RS03095 -1.5 -7.5 diphthine synthase compare
MMP_RS01915 -1.5 -9.9 DUF354 domain-containing protein compare
MMP_RS08100 -1.5 -7.8 8-amino-7-oxononanoate synthase compare
MMP_RS06730 -1.5 -1.8 phosphopantothenate/pantothenate synthetase compare
MMP_RS04585 -1.5 -9.8 AIR synthase related protein compare
MMP_RS04955 -1.5 -4.3 DNA topoisomerase I compare
MMP_RS08320 -1.5 -6.7 molybdopterin molybdotransferase MoeA compare
MMP_RS01795 -1.4 -2.4 methanogenesis marker 6 protein compare
MMP_RS07575 -1.4 -5.2 RNA ligase partner protein compare
MMP_RS08590 -1.4 -5.1 flagellin compare
MMP_RS00720 -1.4 -7.1 metal-dependent hydrolase compare
MMP_RS06035 -1.4 -8.2 glycosyltransferase family 2 protein compare
MMP_RS05345 -1.4 -6.9 hypothetical protein compare
MMP_RS07735 -1.4 -1.3 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha compare
MMP_RS06865 -1.4 -1.6 HypC/HybG/HupF family hydrogenase formation chaperone compare
MMP_RS07600 -1.4 -2.1 Ni-sirohydrochlorin a c-diamide synthase compare
MMP_RS08605 -1.4 -6.7 flagellar protein E compare
MMP_RS06725 -1.4 -8.6 hypothetical protein compare
MMP_RS01665 -1.3 -3.5 DUF2111 domain-containing protein compare
MMP_RS08600 -1.3 -2.9 flagellar protein D compare
MMP_RS07645 -1.3 -6.8 aldehyde dehydrogenase family protein compare
MMP_RS01840 -1.3 -7.5 TIGR00289 family protein compare
MMP_RS01895 -1.3 -10.0 flippase compare
MMP_RS06840 -1.3 -1.1 DNA-directed RNA polymerase subunit N compare
MMP_RS08105 -1.3 -6.6 6-carboxyhexanoate--CoA ligase compare
MMP_RS05930 -1.3 -2.2 3-isopropylmalate dehydratase large subunit compare
MMP_RS03440 -1.3 -1.7 MoaD/ThiS family protein compare
MMP_RS01335 -1.2 -3.3 prefoldin subunit beta compare
MMP_RS07420 -1.2 -3.9 metalloregulator ArsR/SmtB family transcription factor compare
MMP_RS07090 -1.2 -7.0 tRNA (adenine-N1)-methyltransferase compare
MMP_RS02345 -1.2 -2.1 GTP-dependent dephospho-CoA kinase family protein compare
MMP_RS01475 -1.2 -7.1 phosphosulfolactate synthase compare
MMP_RS01575 -1.2 -4.7 aldolase compare
MMP_RS02885 -1.2 -9.3 molybdopterin biosynthesis protein compare
MMP_RS00455 -1.1 -6.7 orotate phosphoribosyltransferase-like protein compare
MMP_RS08330 -1.1 -4.1 NADH-quinone oxidoreductase subunit H compare
MMP_RS05450 -1.1 -2.2 CoB--CoM heterodisulfide reductase subunit C compare
MMP_RS04605 -1.1 -5.0 cobalt ECF transporter T component CbiQ compare
MMP_RS01600 -1.1 -1.5 50S ribosomal protein L15e compare
MMP_RS08460 -1.1 -1.7 proteasome-activating nucleotidase compare
MMP_RS05445 -1.1 -6.0 CoB--CoM heterodisulfide reductase subunit B compare
MMP_RS05925 -1.1 -3.5 small nuclear ribonucleoprotein compare
MMP_RS06685 -1.0 -7.5 formate dehydrogenase H subunit alpha selenocysteine-containing compare
MMP_RS08915 -1.0 -2.2 2 5-diamino-6-(ribosylamino)-4(3H)-pyrimidinone 5'-phosphate reductase compare
MMP_RS01920 -1.0 -7.8 glycosyltransferase family 2 protein compare


Specific Phenotypes

For 3 genes in this experiment

For stress sodium sulfite in Methanococcus maripaludis S2

For stress sodium sulfite across organisms