Experiment set9IT006 for Methanococcus maripaludis S2

Compare to:

H2 McCas with 0.1 mM sulfite

200 most detrimental genes:

  gene name fitness t score description  
MMP_RS06480 +3.6 22.1 ABC transporter substrate-binding protein compare
MMP_RS06165 +3.2 17.3 ABC transporter permease compare
MMP_RS06170 +2.8 8.0 ABC transporter ATP-binding protein compare
MMP_RS07705 +2.2 6.4 transcriptional regulator compare
MMP_RS07615 +2.2 11.1 energy-coupling factor ABC transporter permease compare
MMP_RS07620 +2.1 8.3 energy-coupling factor ABC transporter substrate-binding protein compare
MMP_RS07350 +2.1 5.7 preprotein translocase subunit Sec61beta compare
MMP_RS07625 +1.6 3.0 cobalt ECF transporter T component CbiQ compare
MMP_RS07710 +1.3 4.4 cell division protein FtsZ compare
MMP_RS08705 +1.1 5.3 sulfopyruvate decarboxylase subunit beta compare
MMP_RS03305 +1.1 6.1 winged helix-turn-helix domain-containing protein compare
MMP_RS01465 +0.8 2.5 hypothetical protein compare
MMP_RS08400 +0.8 4.3 MJ0307 family thioredoxin compare
MMP_RS00345 +0.8 3.4 DUF2666 domain-containing protein compare
MMP_RS00915 +0.7 3.5 DUF116 domain-containing protein compare
MMP_RS03340 +0.7 1.0 ABC transporter ATP-binding protein compare
MMP_RS01775 +0.7 2.7 TIGR00297 family protein compare
MMP_RS05315 +0.7 1.2 hypothetical protein compare
MMP_RS08265 +0.7 3.5 rubrerythrin compare
MMP_RS05675 +0.7 2.6 phosphate ABC transporter ATP-binding protein PstB compare
MMP_RS08315 +0.6 2.1 S-methyl-5-thioribose-1-phosphate isomerase compare
MMP_RS07850 +0.6 2.0 prephenate dehydratase compare
MMP_RS01965 +0.6 3.5 DUF1616 domain-containing protein compare
MMP_RS08310 +0.6 1.9 TMEM165/GDT1 family protein compare
MMP_RS07915 +0.6 2.0 DUF4870 domain-containing protein compare
MMP_RS06905 +0.6 1.4 hypothetical protein compare
MMP_RS00910 +0.6 2.8 2-phosphosulfolactate phosphatase compare
MMP_RS08245 +0.6 3.8 DUF4013 domain-containing protein compare
MMP_RS02310 +0.6 1.8 RimK-like ATPgrasp N-terminal domain-containing protein compare
MMP_RS07775 +0.5 3.0 alanine dehydrogenase compare
MMP_RS07125 +0.5 1.6 coenzyme F420-reducing hydrogenase FrhD protein compare
MMP_RS08000 +0.5 4.1 methyl coenzyme M reductase-arginine methyltransferase Mmp10 compare
MMP_RS08430 +0.5 3.2 HAD family hydrolase compare
MMP_RS00655 +0.5 2.3 hypothetical protein compare
MMP_RS04205 +0.5 2.3 carboxymuconolactone decarboxylase family protein compare
MMP_RS00665 +0.5 2.4 hypothetical protein compare
MMP_RS08390 +0.5 2.3 DUF5400 domain-containing protein compare
MMP_RS00660 +0.5 4.1 alkaline phosphatase family protein compare
MMP_RS00545 +0.5 2.8 XRE family transcriptional regulator compare
MMP_RS00825 +0.5 2.9 fumarylacetoacetate hydrolase family protein compare
MMP_RS08285 +0.5 3.6 serine/threonine protein kinase compare
MMP_RS07985 +0.5 3.9 nitroreductase family protein compare
MMP_RS07900 +0.5 0.8 YeeE/YedE family protein compare
MMP_RS06910 +0.5 2.7 RlmF-related methyltransferase compare
MMP_RS06520 +0.5 1.6 DUF1786 domain-containing protein compare
MMP_RS06860 +0.5 1.3 4Fe-4S binding protein compare
MMP_RS02020 +0.5 1.8 gamma-glutamylcyclotransferase compare
MMP_RS07840 +0.5 1.9 ribonuclease III compare
MMP_RS02675 +0.5 2.2 hypothetical protein compare
MMP_RS05850 +0.5 1.9 Ldh family oxidoreductase compare
MMP_RS01120 +0.5 3.3 permease compare
MMP_RS08555 +0.5 1.8 hypothetical protein compare
MMP_RS01055 +0.5 1.4 hypothetical protein compare
MMP_RS07905 +0.5 2.2 DUF3343 domain-containing protein compare
MMP_RS00080 +0.5 1.9 RecB-family nuclease compare
MMP_RS06545 +0.5 2.2 ferredoxin family protein compare
MMP_RS00430 +0.5 2.1 hypothetical protein compare
MMP_RS09025 +0.5 1.0 hypothetical protein compare
MMP_RS09065 +0.4 3.3 hypothetical protein compare
MMP_RS08480 +0.4 3.2 molybdate ABC transporter substrate-binding protein compare
MMP_RS08770 +0.4 3.0 hypothetical protein compare
MMP_RS08410 +0.4 2.7 DUF169 domain-containing protein compare
MMP_RS09030 +0.4 3.1 hypothetical protein compare
MMP_RS08700 +0.4 2.5 hypothetical protein compare
MMP_RS08395 +0.4 2.8 DsrE family protein compare
MMP_RS00535 +0.4 0.9 TIGR00375 family protein compare
MMP_RS03490 +0.4 1.1 DUF2115 domain-containing protein compare
MMP_RS07925 +0.4 1.5 haloacid dehalogenase compare
MMP_RS02045 +0.4 1.1 tRNA-Met compare
MMP_RS06575 +0.4 2.6 fluoride efflux transporter CrcB compare
MMP_RS07895 +0.4 1.9 cytochrome c compare
MMP_RS06155 +0.4 1.7 DUF4186 domain-containing protein compare
MMP_RS09060 +0.4 3.1 hypothetical protein compare
MMP_RS00435 +0.4 3.1 CPBP family intramembrane metalloprotease compare
MMP_RS08755 +0.4 3.1 sodium:solute symporter family protein compare
MMP_RS04730 +0.4 3.0 flavodoxin family protein compare
MMP_RS03300 +0.4 0.5 TOBE domain-containing protein compare
MMP_RS08090 +0.4 2.1 hypothetical protein compare
MMP_RS07805 +0.4 2.9 ABC transporter permease compare
MMP_RS00990 +0.4 1.2 hypothetical protein compare
MMP_RS01460 +0.4 1.3 hypothetical protein compare
MMP_RS08325 +0.4 2.7 hypothetical protein compare
MMP_RS08370 +0.4 0.4 cation:proton antiporter subunit C compare
MMP_RS06540 +0.4 1.7 3-methyl-2-oxobutanoate dehydrogenase subunit VorB compare
MMP_RS08640 +0.4 3.0 TIM barrel protein compare
MMP_RS05545 +0.4 2.4 pyridoxal phosphate-dependent aminotransferase compare
MMP_RS08470 +0.4 2.7 ATP-binding cassette domain-containing protein compare
MMP_RS01570 +0.4 1.0 hypothetical protein compare
MMP_RS00290 +0.4 2.2 hypothetical protein compare
MMP_RS08490 +0.4 3.3 hypothetical protein compare
MMP_RS00675 +0.4 0.5 nitroreductase family protein compare
MMP_RS03130 +0.4 1.8 hypothetical protein compare
MMP_RS00185 +0.4 2.9 potassium channel protein compare
MMP_RS05090 +0.4 1.8 CO dehydrogenase/CO-methylating acetyl-CoA synthase complex subunit beta compare
MMP_RS00105 +0.4 2.3 hypothetical protein compare
MMP_RS08750 +0.4 1.9 hypothetical protein compare
MMP_RS01320 +0.4 2.3 hypothetical protein compare
MMP_RS08725 +0.4 0.3 Ni/Fe hydrogenase subunit alpha compare
MMP_RS08380 +0.4 2.0 phosphatase PAP2 family protein compare
MMP_RS05975 +0.4 0.8 hypothetical protein compare
MMP_RS04195 +0.4 1.5 flavodoxin compare
MMP_RS02295 +0.4 2.1 TatD family hydrolase compare
MMP_RS08940 +0.3 0.7 MetS family NSS transporter small subunit compare
MMP_RS08475 +0.3 2.0 ABC transporter permease compare
MMP_RS08250 +0.3 2.7 pyruvate kinase compare
MMP_RS08665 +0.3 2.8 hypothetical protein compare
MMP_RS08575 +0.3 3.0 hypothetical protein compare
MMP_RS01470 +0.3 1.2 ATP-binding cassette domain-containing protein compare
MMP_RS08260 +0.3 2.3 DUF99 family protein compare
MMP_RS08980 +0.3 1.5 hypothetical protein compare
MMP_RS00795 +0.3 1.7 formate dehydrogenase H subunit alpha selenocysteine-containing compare
MMP_RS08775 +0.3 1.7 methanogenesis marker 9 domain-containing protein compare
MMP_RS06150 +0.3 2.7 hypothetical protein compare
MMP_RS07130 +0.3 2.2 coenzyme F420 hydrogenase subunit gamma compare
MMP_RS08080 +0.3 1.7 YchF/TatD family DNA exonuclease compare
MMP_RS03115 +0.3 2.5 hypothetical protein compare
MMP_RS02680 +0.3 1.5 ABC transporter permease compare
MMP_RS04015 +0.3 1.0 hypothetical protein compare
MMP_RS07815 +0.3 0.7 DUF2120 domain-containing protein compare
MMP_RS08485 +0.3 2.2 tungstate ABC transporter substrate-binding protein WtpA compare
MMP_RS04610 +0.3 1.8 Dabb family protein compare
MMP_RS05835 +0.3 0.4 secondary thiamine-phosphate synthase enzyme YjbQ compare
MMP_RS08860 +0.3 1.7 MinD/ParA family protein compare
MMP_RS08235 +0.3 1.9 hypothetical protein compare
MMP_RS03875 +0.3 2.2 hypothetical protein compare
MMP_RS00155 +0.3 1.4 heavy metal-binding domain-containing protein compare
MMP_RS06965 +0.3 2.0 TIGR04014 family B12-binding domain/radical SAM domain-containing protein compare
MMP_RS03800 +0.3 1.6 hypothetical protein compare
MMP_RS05985 +0.3 0.6 hypothetical protein compare
MMP_RS03150 +0.3 1.6 phosphoglycerate mutase compare
MMP_RS04815 +0.3 1.8 chemotaxis protein CheD compare
MMP_RS03550 +0.3 0.5 DUF2124 domain-containing protein compare
MMP_RS06375 +0.3 1.3 ATP-dependent sacrificial sulfur transferase LarE compare
MMP_RS06710 +0.3 2.0 selenium-binding protein compare
MMP_RS00570 +0.3 1.3 protein-L-isoaspartate O-methyltransferase compare
MMP_RS07150 +0.3 1.2 MTH895/ArsE family thioredoxin-like protein compare
MMP_RS08405 +0.3 1.9 MFS transporter compare
MMP_RS01060 +0.3 2.3 calcium/sodium antiporter compare
MMP_RS08130 +0.3 2.2 IGHMBP2 family helicase compare
MMP_RS05110 +0.3 1.5 16S ribosomal RNA methyltransferase A compare
MMP_RS08215 +0.3 1.1 DUF483 domain-containing protein compare
MMP_RS08275 +0.3 1.9 hypothetical protein compare
MMP_RS05990 +0.3 1.7 DsrE family protein compare
MMP_RS07590 +0.3 2.3 hypothetical protein compare
MMP_RS02100 +0.3 1.0 metallophosphoesterase compare
MMP_RS08835 +0.3 2.3 H(2)-dependent methylenetetrahydromethanopterin dehydrogenase-related protein compare
MMP_RS01635 +0.3 1.6 thiamine pyrophosphate-dependent enzyme compare
MMP_RS04995 +0.3 1.4 hypothetical protein compare
MMP_RS01785 +0.3 1.8 hypothetical protein compare
MMP_RS05780 +0.3 2.0 multidrug resistance efflux transporter family protein compare
MMP_RS07145 +0.3 1.9 AmmeMemoRadiSam system protein B compare
MMP_RS07085 +0.3 1.7 ribonuclease HII compare
MMP_RS07910 +0.3 1.3 NAD(P)H-hydrate dehydratase compare
MMP_RS00710 +0.3 0.8 hypothetical protein compare
MMP_RS06465 +0.3 2.1 NERD domain-containing protein compare
MMP_RS06075 +0.3 1.9 class I SAM-dependent methyltransferase compare
MMP_RS02745 +0.3 0.9 hypothetical protein compare
MMP_RS02770 +0.3 1.3 hypothetical protein compare
MMP_RS04635 +0.3 1.5 GNAT family N-acetyltransferase compare
MMP_RS02390 +0.3 1.3 NifB/NifX family molybdenum-iron cluster-binding protein compare
MMP_RS06745 +0.3 0.8 DUF2119 domain-containing protein compare
MMP_RS01250 +0.3 1.2 tRNA (guanine(26)-N(2))-dimethyltransferase compare
MMP_RS05660 +0.3 2.0 phosphate ABC transporter substrate-binding protein compare
MMP_RS03220 +0.2 0.9 RNA 2' 3'-cyclic phosphodiesterase compare
MMP_RS07715 +0.2 1.8 YfcE family phosphodiesterase compare
MMP_RS06760 +0.2 0.9 hypothetical protein compare
MMP_RS04030 +0.2 1.4 hypothetical protein compare
MMP_RS08290 +0.2 1.4 DNA-binding protein Alba compare
MMP_RS04985 +0.2 1.2 DUF2180 family protein compare
MMP_RS00135 +0.2 1.4 DUF2121 domain-containing protein compare
MMP_RS00085 +0.2 1.7 DNA cytosine methyltransferase compare
MMP_RS00800 +0.2 1.7 Coenzyme F420 hydrogenase/dehydrogenase beta subunit C-terminal domain compare
MMP_RS02370 +0.2 1.0 NifB/NifX family molybdenum-iron cluster-binding protein compare
MMP_RS07765 +0.2 1.3 sodium:alanine symporter family protein compare
MMP_RS06305 +0.2 1.3 transporter substrate-binding domain-containing protein compare
MMP_RS01855 +0.2 1.3 2-hydroxyacyl-CoA dehydratase family protein compare
MMP_RS00335 +0.2 1.0 5-amino-6-(D-ribitylamino)uracil--L-tyrosine 4-hydroxyphenyl transferase CofH compare
MMP_RS07885 +0.2 1.3 tripartite tricarboxylate transporter permease compare
MMP_RS01435 +0.2 0.7 DMT family transporter compare
MMP_RS07550 +0.2 1.7 L-serine ammonia-lyase iron-sulfur-dependent subunit alpha compare
MMP_RS05085 +0.2 1.2 AAA family ATPase compare
MMP_RS08760 +0.2 0.9 hypothetical protein compare
MMP_RS00295 +0.2 0.7 gamma carbonic anhydrase family protein compare
MMP_RS05560 +0.2 1.2 deoxyuridine 5'-triphosphate nucleotidohydrolase compare
MMP_RS05470 +0.2 1.4 DUF523 and DUF1722 domain-containing protein compare
MMP_RS03910 +0.2 0.5 hypothetical protein compare
MMP_RS06050 +0.2 1.5 ZIP family metal transporter compare
MMP_RS06045 +0.2 1.7 DNA polymerase compare
MMP_RS07345 +0.2 1.0 glycine synthesis protein GlyXL (from data) compare
MMP_RS01130 +0.2 1.1 flavoprotein compare
MMP_RS08340 +0.2 1.0 4Fe-4S binding protein compare
MMP_RS01625 +0.2 1.5 rubredoxin compare
MMP_RS07095 +0.2 0.6 PspC domain-containing protein compare
MMP_RS00560 +0.2 1.5 cation:proton antiporter compare
MMP_RS07120 +0.2 1.4 coenzyme F420 hydrogenase subunit alpha compare
MMP_RS00195 +0.2 1.8 DUF4013 domain-containing protein compare
MMP_RS01065 +0.2 1.5 alpha/beta hydrolase compare
MMP_RS06875 +0.2 1.3 FAD-dependent oxidoreductase compare
MMP_RS03740 +0.2 1.2 indolepyruvate oxidoreductase subunit beta compare
MMP_RS02695 +0.2 1.3 formylmethanofuran dehydrogenase subunit A compare


Specific Phenotypes

For 3 genes in this experiment

For stress sodium sulfite in Methanococcus maripaludis S2

For stress sodium sulfite across organisms