Experiment set9IT005 for Pseudomonas syringae pv. syringae B728a

Compare to:

KB with Harmol 10 mM

200 most important genes:

  gene name fitness t score description  
Psyr_1544 -4.0 -6.0 SirA-like protein compare
Psyr_3193 -3.9 -4.6 Transcription factor jumonji, jmjC compare
Psyr_4340 -3.5 -12.8 phosphomethylpyrimidine kinase, putative compare
Psyr_0034 -3.4 -4.6 tryptophan synthase, beta chain compare
Psyr_0951 -3.2 -5.0 UBA/THIF-type NAD/FAD binding fold:MoeZ/MoeB compare
Psyr_4740 -3.1 -9.1 thiazole-phosphate synthase compare
Psyr_4684 -2.9 -4.7 biotin synthesis protein BioC compare
Psyr_0033 -2.9 -3.4 tryptophan synthase, alpha chain compare
Psyr_4203 -2.8 -3.8 SsrA-binding protein compare
Psyr_4009 -2.8 -9.3 RND efflux system, outer membrane lipoprotein, NodT compare
Psyr_4341 -2.8 -8.2 thiamine-phosphate diphosphorylase compare
Psyr_4581 -2.6 -3.8 anthranilate synthase, component II compare
Psyr_1910 -2.4 -6.6 VacJ-like lipoprotein compare
Psyr_1371 -2.4 -8.1 5'-nucleotidase / exopolyphosphatase / 3'-nucleotidase compare
Psyr_4687 -2.4 -10.7 biotin synthase compare
Psyr_4091 -2.4 -4.5 8-oxo-dGTPase compare
Psyr_1717 -2.4 -2.6 TPR repeat:von Willebrand factor, type A compare
Psyr_4683 -2.3 -5.2 dethiobiotin synthase compare
Psyr_2080 -2.2 -6.2 aminodeoxychorismate synthase, subunit I compare
Psyr_1247 -2.1 -2.6 conserved hypothetical protein compare
Psyr_0835 -2.1 -6.6 transcriptional regulator, TraR/DksA family compare
Psyr_3287 -2.1 -2.9 DNA topoisomerase I compare
Psyr_1613 -2.1 -4.3 septum site-determining protein MinC compare
Psyr_4139 -2.0 -5.6 Mce4/Rv3499c/MTV023.06c protein compare
Psyr_1650 -2.0 -3.5 aminodeoxychorismate lyase apoprotein compare
Psyr_4774 -1.9 -2.5 Hypothetical protein compare
Psyr_2980 -1.9 -3.3 UDP-glucose pyrophosphorylase compare
Psyr_0475 -1.8 -3.7 Protein of unknown function YGGT compare
Psyr_0454 -1.8 -5.9 adenosylmethionine-8-amino-7-oxononanoate aminotransferase apoenzyme compare
Psyr_1885 -1.8 -3.3 hypothetical protein compare
Psyr_0487 -1.7 -3.0 glutathione synthase compare
Psyr_1419 -1.6 -4.3 preQ(0) biosynthesis protein QueC compare
Psyr_4519 -1.6 -6.1 General substrate transporter:Major facilitator superfamily compare
Psyr_3698 -1.6 -5.9 Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal:Hpt compare
Psyr_4566 -1.5 -7.4 Peptidase M23B compare
Psyr_4115 -1.5 -2.8 phosphoheptose isomerase compare
Psyr_5132 -1.5 -4.4 Glucose-inhibited division protein A subfamily compare
Psyr_1236 -1.5 -3.4 transcriptional regulator, BadM/Rrf2 family compare
Psyr_5135 -1.5 -0.8 Protein of unknown function DUF37 compare
Psyr_1663 -1.5 -3.7 phosphoribosylanthranilate isomerase compare
Psyr_1268 -1.5 -5.1 extracellular solute-binding protein, family 3:SLT compare
Psyr_2838 -1.5 -2.4 conserved hypothetical protein compare
Psyr_1372 -1.5 -4.0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase compare
Psyr_3665 -1.4 -4.3 conserved hypothetical protein compare
Psyr_0549 -1.4 -2.2 Metallophosphoesterase compare
Psyr_3202 -1.4 -2.1 NADH dehydrogenase subunit G compare
Psyr_4008 -1.4 -10.1 Hydrophobe/amphiphile efflux-1 HAE1 compare
Psyr_3199 -1.3 -2.5 NADH dehydrogenase subunit D / NADH dehydrogenase subunit C compare
Psyr_3179 -1.3 -2.3 DNA translocase FtsK compare
Psyr_5067 -1.3 -4.8 conserved hypothetical protein compare
Psyr_4686 -1.3 -5.5 8-amino-7-oxononanoate synthase compare
Psyr_2594 -1.3 -1.3 unknown conserved protein in bacilli compare
Psyr_4141 -1.2 -3.8 ABC transporter compare
Psyr_4627 -1.2 -2.8 dimethyladenosine transferase compare
Psyr_3208 -1.2 -2.8 NADH dehydrogenase subunit M compare
Psyr_0826 -1.2 -5.0 glucose-6-phosphate isomerase compare
Psyr_0044 -1.2 -2.0 transferase hexapeptide repeat protein compare
Psyr_3886 -1.2 -1.7 methionyl-tRNA synthetase compare
Psyr_1783 -1.2 -2.2 CDS compare
Psyr_2668 -1.1 -3.4 Helix-turn-helix, Fis-type compare
Psyr_4254 -1.1 -1.8 conserved hypothetical protein compare
Psyr_2264 -1.1 -2.3 Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal compare
Psyr_0535 -1.1 -2.5 toluene tolerance protein, putative compare
Psyr_2590 -1.1 -2.6 Periplasmic binding protein compare
Psyr_1546 -1.1 -3.8 Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen compare
Psyr_5133 -1.1 -3.9 tRNA modification GTPase trmE compare
Psyr_4586 -1.1 -2.6 tail protein, putative compare
Psyr_0070 -1.1 -2.1 hypothetical protein compare
Psyr_5065 -1.1 -4.7 ATP-dependent DNA helicase UvrD compare
Psyr_1573 -1.1 -3.2 cyclic nucleotide-binding protein compare
Psyr_0845 -1.1 -2.5 conserved hypothetical protein compare
Psyr_2591 -1.1 -4.4 transport system permease protein compare
Psyr_2897 -1.0 -4.3 regulatory protein, LuxR:Response regulator receiver compare
Psyr_0571 -1.0 -2.7 tRNA isopentenyltransferase compare
Psyr_0529 -1.0 -2.6 Glycosyl transferase, group 1 compare
Psyr_0385 -1.0 -1.9 phosphoribosyl-ATP pyrophosphatase compare
Psyr_3701 -1.0 -1.3 thioredoxin, putative compare
Psyr_3015 -1.0 -4.4 cobaltochelatase CobN subunit compare
Psyr_1037 -1.0 -3.2 ribosomal subunit interface protein, putative compare
Psyr_4007 -1.0 -5.5 Secretion protein HlyD compare
Psyr_0215 -1.0 -6.4 Exodeoxyribonuclease III xth compare
Psyr_3357 -1.0 -2.2 transcriptional regulator, LysR family compare
Psyr_4512 -1.0 -4.7 putative phage-related protein compare
Psyr_4138 -1.0 -2.5 Toluene tolerance compare
Psyr_4194 -1.0 -2.5 DnaJ central region:Heat shock protein DnaJ, N-terminal:Chaperone DnaJ, C-terminal compare
Psyr_1747 -1.0 -3.1 ATP-dependent Clp protease proteolytic subunit ClpP compare
Psyr_1796 -1.0 -2.3 GCN5-related N-acetyltransferase compare
Psyr_2487 -1.0 -2.0 Short-chain dehydrogenase/reductase SDR compare
Psyr_4158 -1.0 -5.3 conserved hypothetical protein compare
Psyr_3419 -1.0 -2.8 4Fe-4S ferredoxin, iron-sulfur binding protein compare
Psyr_3904 -1.0 -4.6 Major intrinsic protein compare
Psyr_1410 -0.9 -2.3 Holliday junction DNA helicase RuvB compare
Psyr_3841 -0.9 -2.4 conserved hypothetical protein compare
Psyr_3681 -0.9 -1.9 cob(I)yrinic acid a,c-diamide adenosyltransferase compare
Psyr_3258 -0.9 -2.8 conserved hypothetical protein compare
Psyr_4490 -0.9 -1.9 transcriptional regulator, DeoR family compare
Psyr_3591 -0.9 -2.7 ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal compare
Psyr_4991 -0.9 -1.9 hypothetical protein compare
Psyr_0983 -0.9 -3.9 Protein of unknown function DUF159 compare
Psyr_3776 -0.9 -2.2 Cytosine deaminase compare
Psyr_1645 -0.9 -2.4 phosphate:acyl-[acyl carrier protein] acyltransferase compare
Psyr_5050 -0.9 -2.9 transcriptional regulator, LysR family compare
Psyr_4580 -0.9 -2.7 anthranilate phosphoribosyltransferase compare
Psyr_2804 -0.9 -3.0 hypothetical protein compare
Psyr_3395 -0.9 -2.1 FlhB domain protein compare
Psyr_2330 -0.9 -2.5 FAD dependent oxidoreductase compare
Psyr_5102 -0.9 -1.2 ABC transporter compare
Psyr_2150 -0.9 -1.6 protein of unknown function DUF903 compare
Psyr_1378 -0.9 -1.8 RecA protein compare
Psyr_1946 -0.9 -1.2 diaminobutyrate aminotransferase apoenzyme compare
Psyr_2137 -0.9 -1.6 molybdopterin molybdochelatase compare
Psyr_2582 -0.9 -4.7 TonB-dependent siderophore receptor compare
Psyr_2593 -0.9 -2.0 ABC transporter compare
Psyr_4001 -0.9 -1.7 conserved domain protein compare
Psyr_0574 -0.8 -2.8 protease FtsH subunit HflK compare
Psyr_2620 -0.8 -1.1 RND efflux system, outer membrane lipoprotein, NodT compare
Psyr_4151 -0.8 -1.2 Phosphocarrier HPr protein compare
Psyr_4598 -0.8 -3.2 lipoprotein, putative compare
Psyr_1845 -0.8 -3.8 GTP cyclohydrolase I compare
Psyr_4183 -0.8 -1.6 protein translocase subunit secG compare
Psyr_4622 -0.8 -2.6 Nucleotidyl transferase compare
Psyr_3289 -0.8 -1.6 3-ketoacyl-CoA thiolase compare
Psyr_1017 -0.8 -1.1 type III effector HopJ1 compare
Psyr_4822 -0.8 -1.7 Helix-turn-helix, Fis-type:Nitrogen regulation protein NR(I) compare
Psyr_0184 -0.8 -2.3 Protein of unknown function DUF484 compare
Psyr_1722 -0.8 -2.5 Amidohydrolase 2 compare
Psyr_0524 -0.8 -2.1 Lipopolysaccharide kinase compare
Psyr_3842 -0.8 -3.8 SNF2-related:Helicase, C-terminal:Type III restriction enzyme, res subunit compare
Psyr_4089 -0.8 -3.4 PAS compare
Psyr_2430 -0.8 -2.8 NUDIX hydrolase compare
Psyr_0917 -0.8 -4.7 ABC-2 compare
Psyr_0498 -0.8 -3.0 Protein of unknown function DUF1445 compare
Psyr_4015 -0.8 -1.7 conserved domain protein compare
Psyr_3284 -0.8 -2.4 SOS cell division inhibitor SulA compare
Psyr_0918 -0.8 -5.9 ABC transporter compare
Psyr_4362 -0.8 -1.7 Rare lipoprotein A compare
Psyr_3954 -0.8 -3.2 GTP-binding protein LepA compare
Psyr_5053 -0.8 -3.3 asparaginase compare
Psyr_2143 -0.8 -1.4 delta1-piperideine 2-carboxylate reductase compare
Psyr_1140 -0.8 -2.3 Disulfide bond formation protein DsbB compare
Psyr_3007 -0.8 -1.3 Protein of unknown function DUF1294 compare
Psyr_0579 -0.8 -5.2 RNAse R compare
Psyr_0830 -0.8 -3.0 Poly(A) polymerase compare
Psyr_2112 -0.8 -1.1 Protein with unknown function DUF469 compare
Psyr_1499 -0.8 -1.4 Protein of unknown function DUF compare
Psyr_0976 -0.8 -2.6 Malate:quinone-oxidoreductase compare
Psyr_1864 -0.8 -2.9 spermidine synthase compare
Psyr_3425 -0.8 -1.8 Cyclic nucleotide-binding:Bacterial regulatory protein, Crp compare
Psyr_3055 -0.8 -1.4 Aminoglycoside phosphotransferase compare
Psyr_0255 -0.7 -1.7 glutamate-cysteine ligase compare
Psyr_2213 -0.7 -2.1 transcriptional regulator, AraC family compare
Psyr_0633 -0.7 -2.4 conserved hypothetical protein compare
Psyr_4454 -0.7 -1.2 HupE/UreJ protein compare
Psyr_0916 -0.7 -4.5 GDP-mannose 4,6-dehydratase compare
Psyr_4941 -0.7 -2.2 NUDIX hydrolase compare
Psyr_3796 -0.7 -1.9 transcriptional regulator, LysR family compare
Psyr_3672 -0.7 -1.6 cobalamin-5'-phosphate synthase compare
Psyr_2339 -0.7 -1.7 hypothetical protein compare
Psyr_0531 -0.7 -2.2 LmbE-like protein compare
Psyr_2757 -0.7 -1.5 Binding-protein-dependent transport systems inner membrane component compare
Psyr_3233 -0.7 -1.9 FMN reductase compare
Psyr_3644 -0.7 -2.3 prephenate dehydrogenase compare
Psyr_3278 -0.7 -3.1 Endonuclease/exonuclease/phosphatase compare
Psyr_3135 -0.7 -1.6 transcriptional regulator, GntR family compare
Psyr_0838 -0.7 -0.9 Rieske [2Fe-2S] region compare
Psyr_0653 -0.7 -1.6 transcriptional regulator, MerR family compare
Psyr_3445 -0.7 -2.7 Flagellar biosynthesis protein, FliO compare
Psyr_2256 -0.7 -1.7 ABC transporter compare
Psyr_3323 -0.7 -2.0 conserved hypothetical protein compare
Psyr_3489 -0.7 -2.0 FlgN compare
Psyr_3439 -0.7 -2.5 GTP-binding signal recognition particle SRP54, G-domain protein compare
Psyr_1800 -0.7 -2.2 transcriptional regulator, LysR family compare
Psyr_0819 -0.7 -3.2 TatD-related deoxyribonuclease compare
Psyr_3967 -0.7 -1.6 membrane protein TctB, putative compare
Psyr_3115 -0.7 -2.2 Glycerate kinase compare
Psyr_1667 -0.7 -2.8 Colicin V production protein compare
Psyr_2386 -0.7 -1.4 hypothetical protein compare
Psyr_0202 -0.7 -3.7 transcriptional regulator, LysR family compare
Psyr_0281 -0.7 -1.4 ABC transporter compare
Psyr_2085 -0.7 -3.0 methylisocitrate lyase compare
Psyr_2836 -0.7 -2.3 hypothetical protein compare
Psyr_1373 -0.7 -1.2 Peptidoglycan-binding LysM:Peptidase M23B compare
Psyr_4316 -0.7 -1.5 conserved hypothetical protein compare
Psyr_1751 -0.7 -2.4 PpiC-type peptidyl-prolyl cis-trans isomerase compare
Psyr_2840 -0.7 -2.6 hypothetical protein compare
Psyr_0936 -0.7 -4.4 Glycosyl transferase, group 1 compare
Psyr_3020 -0.7 -1.3 precorrin-4 C11-methyltransferase compare
Psyr_3585 -0.7 -2.0 Sua5/YciO/YrdC/YwlC compare
Psyr_2592 -0.7 -2.0 transport system permease protein compare
Psyr_2927 -0.7 -1.2 transcriptional regulator, TetR family compare
Psyr_3969 -0.7 -3.4 Putative ammonia monooxygenase compare
Psyr_1791 -0.7 -1.0 HAD-superfamily hydrolase, subfamily IA, variant 2 compare
Psyr_0622 -0.7 -2.4 transcriptional regulator, XRE family compare
Psyr_2551 -0.7 -2.0 acetylornithine aminotransferase apoenzyme compare
Psyr_2538 -0.7 -0.9 Binding-protein-dependent transport systems inner membrane component compare
Psyr_2098 -0.7 -2.4 uroporphyrinogen-III C-methyltransferase compare
Psyr_1269 -0.7 -1.8 phosphoribosylformylglycinamidine synthase compare
Psyr_4894 -0.6 -2.7 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase compare
Psyr_3473 -0.6 -1.6 Flagellar P-ring protein compare
Psyr_1530 -0.6 -1.3 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Pseudomonas syringae pv. syringae B728a in stress experiments

For stress Harmol across organisms