Experiment set8S568 for Methanococcus maripaludis JJ

Compare to:

McCas_formate_complete no stress control

200 most important genes:

  gene name fitness t score description  
MMJJ_RS00450 -3.7 -1.6 DUF126 domain-containing protein compare
MMJJ_RS05575 -3.6 -2.4 2-amino-5-formylamino-6-ribosylaminopyrimidin- 4(3H)-one 5'-monophosphate deformylase compare
MMJJ_RS00050 -3.4 -10.6 AAA family ATPase compare
MMJJ_RS04730 -3.4 -1.9 tyrosine decarboxylase MfnA compare
MMJJ_RS09375 -3.4 -1.2 hypothetical protein compare
MMJJ_RS00055 -3.4 -10.4 CO dehydrogenase/acetyl-CoA synthase subunit delta compare
MMJJ_RS08130 -3.3 -1.0 translation initiation factor IF-2 subunit gamma compare
MMJJ_RS07360 -3.2 -1.6 TIGR00269 family protein compare
MMJJ_RS07410 -3.2 -2.1 methanogenesis marker protein Mmp4/MtxX compare
MMJJ_RS08625 -3.2 -3.7 magnesium/cobalt transporter CorA compare
MMJJ_RS03230 -3.1 -3.3 NAD(P)/FAD-dependent oxidoreductase compare
MMJJ_RS03270 -3.1 -1.8 ribosome biogenesis/translation initiation ATPase RLI compare
MMJJ_RS00210 -3.1 -1.4 DUF530 family protein compare
MMJJ_RS00045 -3.1 -15.8 CO dehydrogenase/CO-methylating acetyl-CoA synthase complex subunit beta compare
MMJJ_RS00035 -3.1 -17.3 CO dehydrogenase/acetyl-CoA synthase complex subunit alpha compare
MMJJ_RS02045 -3.1 -1.6 molybdenum cofactor guanylyltransferase compare
MMJJ_RS00070 -3.0 -3.2 CooT family nickel-binding protein compare
MMJJ_RS02040 -3.0 -1.5 Asp-tRNA(Asn) amidotransferase subunit GatC compare
MMJJ_RS06910 -2.9 -2.0 energy-converting NiFe hydrogenase A subunit EhaA compare
MMJJ_RS05535 -2.9 -12.7 hypothetical protein compare
MMJJ_RS01690 -2.9 -2.9 methanogenesis marker 12 protein compare
MMJJ_RS01810 -2.9 -1.4 methyl coenzyme M reductase system, component A2 compare
MMJJ_RS04875 -2.9 -1.2 tRNA-Lys compare
MMJJ_RS00060 -2.9 -17.4 acetyl-CoA decarbonylase/synthase complex subunit gamma compare
MMJJ_RS00040 -2.9 -7.4 CO dehydrogenase/acetyl-CoA synthase complex subunit epsilon compare
MMJJ_RS04485 -2.9 -7.6 riboflavin synthase compare
MMJJ_RS07245 -2.9 -3.3 amidohydrolase family protein compare
MMJJ_RS03110 -2.8 -3.4 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase compare
MMJJ_RS06860 -2.8 -2.3 hypothetical protein compare
MMJJ_RS06915 -2.7 -13.9 helix-turn-helix domain-containing protein compare
MMJJ_RS01865 -2.7 -5.3 peptidyl-tRNA hydrolase Pth2 compare
MMJJ_RS07190 -2.7 -3.6 RtcB family protein compare
MMJJ_RS05190 -2.7 -7.7 gamma carbonic anhydrase family protein compare
MMJJ_RS04720 -2.7 -1.7 IMP dehydrogenase compare
MMJJ_RS05765 -2.7 -0.8 flagellar protein E compare
MMJJ_RS06855 -2.7 -0.9 DUF2104 domain-containing protein compare
MMJJ_RS06705 -2.6 -3.5 bifunctional NADP phosphatase/NAD kinase compare
MMJJ_RS00075 -2.6 -10.6 AAA family ATPase compare
MMJJ_RS06695 -2.6 -2.0 amidohydrolase compare
MMJJ_RS07960 -2.6 -2.7 quinolinate synthase NadA compare
MMJJ_RS04800 -2.6 -3.8 2-phospho-L-lactate guanylyltransferase compare
MMJJ_RS02200 -2.6 -7.5 chorismate pyruvate-lyase family protein compare
MMJJ_RS08320 -2.6 -2.2 CDP-diacylglycerol--serine O-phosphatidyltransferase compare
MMJJ_RS07950 -2.6 -2.0 4Fe-4S binding protein compare
MMJJ_RS07000 -2.6 -1.4 TrkH family potassium uptake protein compare
MMJJ_RS04200 -2.5 -3.0 triphosphoribosyl-dephospho-CoA synthase compare
MMJJ_RS08575 -2.4 -3.8 hypothetical protein compare
MMJJ_RS00080 -2.4 -11.4 DUF166 domain-containing protein compare
MMJJ_RS05590 -2.4 -1.8 homoserine dehydrogenase compare
MMJJ_RS07945 -2.4 -1.3 4Fe-4S binding protein compare
MMJJ_RS05655 -2.4 -8.2 HisA/HisF family protein compare
MMJJ_RS00125 -2.4 -1.3 KEOPS complex subunit Cgi121 compare
MMJJ_RS08080 -2.4 -9.4 TIGR00300 family protein compare
MMJJ_RS08660 -2.4 -2.5 acetylornithine transaminase compare
MMJJ_RS03965 -2.4 -1.4 DNA-directed RNA polymerase subunit L compare
MMJJ_RS04655 -2.4 -6.3 FAD-dependent oxidoreductase compare
MMJJ_RS05380 -2.4 -1.0 hypothetical protein compare
MMJJ_RS06875 -2.4 -1.8 hypothetical protein compare
MMJJ_RS03620 -2.4 -2.7 DUF2097 domain-containing protein compare
MMJJ_RS05415 -2.3 -1.1 hypothetical protein compare
MMJJ_RS08500 -2.3 -5.1 L-sulfolactate dehydrogenase compare
MMJJ_RS06240 -2.3 -1.6 dihydropteroate synthase-like protein compare
MMJJ_RS08010 -2.3 -6.7 phosphoadenosine phosphosulfate reductase family protein compare
MMJJ_RS07470 -2.3 -1.5 50S ribosome-binding GTPase compare
MMJJ_RS08430 -2.3 -5.3 small nuclear ribonucleoprotein compare
MMJJ_RS07705 -2.3 -2.0 GTP-binding protein EngB compare
MMJJ_RS05155 -2.3 -3.5 5-amino-6-(D-ribitylamino)uracil--L-tyrosine 4-hydroxyphenyl transferase CofH compare
MMJJ_RS04970 -2.3 -1.5 DUF655 domain-containing protein compare
MMJJ_RS07040 -2.3 -1.3 preprotein translocase subunit SecY compare
MMJJ_RS04475 -2.3 -3.7 3,4-dihydroxy-2-butanone-4-phosphate synthase compare
MMJJ_RS05650 -2.3 -1.3 formylmethanofuran dehydrogenase subunit B compare
MMJJ_RS05065 -2.3 -3.8 (4-{4-[2-(gamma-L- glutamylamino)ethyl]phenoxymethyl}furan-2-yl)methanamine synthase compare
MMJJ_RS03200 -2.3 -1.4 uroporphyrinogen-III synthase compare
MMJJ_RS08840 -2.2 -4.0 calcium/sodium antiporter compare
MMJJ_RS03190 -2.2 -1.8 phosphopyruvate hydratase compare
MMJJ_RS03760 -2.2 -1.9 hydrogenase maturation nickel metallochaperone HypA compare
MMJJ_RS06375 -2.2 -3.4 UbiX family flavin prenyltransferase compare
MMJJ_RS03920 -2.2 -11.8 nickel pincer cofactor biosynthesis protein LarC compare
MMJJ_RS03245 -2.2 -0.9 UMP kinase compare
MMJJ_RS00065 -2.2 -6.5 4Fe-4S dicluster domain-containing protein compare
MMJJ_RS05070 -2.2 -1.0 DNA primase catalytic subunit PriS compare
MMJJ_RS03140 -2.2 -9.5 tRNA-dihydrouridine synthase compare
MMJJ_RS00355 -2.1 -2.6 ribonuclease P protein component 4 compare
MMJJ_RS07345 -2.1 -5.8 homocysteine biosynthesis protein compare
MMJJ_RS01870 -2.1 -1.0 methanogenesis marker 15 protein compare
MMJJ_RS01830 -2.1 -2.5 tRNA(Ile)(2)-agmatinylcytidine synthase compare
MMJJ_RS07380 -2.1 -7.5 sulfide-dependent adenosine diphosphate thiazole synthase compare
MMJJ_RS06180 -2.1 -1.9 tryptophan--tRNA ligase compare
MMJJ_RS05195 -2.1 -5.4 hypothetical protein compare
MMJJ_RS04150 -2.1 -2.0 DUF5379 domain-containing protein compare
MMJJ_RS08535 -2.1 -3.0 NOL1/NOP2/sun family putative RNA methylase compare
MMJJ_RS07590 -2.1 -10.4 flap endonuclease-1 compare
MMJJ_RS07425 -2.0 -8.6 MBL fold metallo-hydrolase compare
MMJJ_RS00475 -2.0 -1.4 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase compare
MMJJ_RS05610 -2.0 -3.9 CDP-2,3-bis-(O-geranylgeranyl)-sn-glycerol synthase compare
MMJJ_RS00270 -2.0 -1.6 adenosylcobinamide-GDP ribazoletransferase compare
MMJJ_RS02090 -2.0 -4.0 tyramine--L-glutamate ligase compare
MMJJ_RS01200 -2.0 -1.2 PRC-barrel domain-containing protein compare
MMJJ_RS04685 -2.0 -5.8 carbamoyltransferase HypF compare
MMJJ_RS01880 -2.0 -2.7 RlmE family RNA methyltransferase compare
MMJJ_RS05490 -2.0 -1.6 imidazole glycerol phosphate synthase subunit HisF compare
MMJJ_RS05445 -2.0 -1.1 2-oxoacid:acceptor oxidoreductase subunit alpha compare
MMJJ_RS06725 -2.0 -9.6 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMJJ_RS05260 -1.9 -3.5 ATP-grasp domain-containing protein compare
MMJJ_RS03060 -1.9 -1.4 methanogenesis marker 7 protein compare
MMJJ_RS07035 -1.9 -1.4 glycosyl transferase compare
MMJJ_RS06600 -1.9 -1.4 DUF555 domain-containing protein compare
MMJJ_RS01765 -1.8 -6.5 winged helix-turn-helix domain-containing protein compare
MMJJ_RS03810 -1.8 -2.7 AIR synthase-related protein compare
MMJJ_RS01355 -1.8 -2.3 UDP-N-acetyl-D-mannosamine dehydrogenase compare
MMJJ_RS07015 -1.8 -1.1 PFL family protein compare
MMJJ_RS08020 -1.8 -5.7 nucleotidyltransferase domain-containing protein compare
MMJJ_RS03580 -1.8 -2.0 TIGR00303 family protein compare
MMJJ_RS07975 -1.8 -6.3 ATP-dependent sacrificial sulfur transferase LarE compare
MMJJ_RS06835 -1.8 -10.0 4Fe-4S binding protein compare
MMJJ_RS00935 -1.8 -9.1 nickel pincer cofactor biosynthesis protein LarB compare
MMJJ_RS06250 -1.8 -1.3 nicotinamide-nucleotide adenylyltransferase compare
MMJJ_RS05330 -1.8 -1.0 DNA polymerase II large subunit compare
MMJJ_RS04700 -1.8 -4.9 deoxyhypusine synthase compare
MMJJ_RS06270 -1.8 -5.5 dethiobiotin synthase compare
MMJJ_RS02855 -1.8 -7.6 DEAD/DEAH box helicase compare
MMJJ_RS05360 -1.8 -5.1 nickel-responsive transcriptional regulator NikR compare
MMJJ_RS06930 -1.8 -1.5 type II methionyl aminopeptidase compare
MMJJ_RS03785 -1.7 -1.9 hypothetical protein compare
MMJJ_RS06260 -1.7 -5.2 6-carboxyhexanoate--CoA ligase compare
MMJJ_RS01600 -1.7 -0.9 radical SAM protein compare
MMJJ_RS04050 -1.7 -0.8 dihydroneopterin aldolase family protein compare
MMJJ_RS06225 -1.7 -1.4 adenosylmethionine decarboxylase compare
MMJJ_RS04790 -1.7 -2.4 biotin--[acetyl-CoA-carboxylase] ligase compare
MMJJ_RS04520 -1.7 -3.3 coenzyme F430 synthase compare
MMJJ_RS04870 -1.7 -1.2 tRNA-Asp compare
MMJJ_RS06255 -1.7 -4.7 tRNA uridine(34) 5-carboxymethylaminomethyl modification radical SAM/GNAT enzyme Elp3 compare
MMJJ_RS00580 -1.7 -0.9 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase subunit CofG compare
MMJJ_RS07350 -1.7 -2.3 4Fe-4S binding protein compare
MMJJ_RS00785 -1.7 -1.9 hypothetical protein compare
MMJJ_RS06175 -1.7 -1.2 DUF1743 domain-containing protein compare
MMJJ_RS00645 -1.6 -7.2 adenosylmethionine--8-amino-7-oxononanoate transaminase compare
MMJJ_RS00215 -1.6 -1.3 CCA tRNA nucleotidyltransferase compare
MMJJ_RS04565 -1.6 -2.1 sirohydrochlorin nickelochelatase compare
MMJJ_RS03225 -1.6 -2.1 4Fe-4S binding protein compare
MMJJ_RS04760 -1.6 -9.1 5,10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdC compare
MMJJ_RS08340 -1.6 -3.6 archaeoflavoprotein AfpA compare
MMJJ_RS03005 -1.6 -2.1 Ni-sirohydrochlorin a,c-diamide reductive cyclase catalytic subunit compare
MMJJ_RS08585 -1.6 -5.5 M42 family metallopeptidase compare
MMJJ_RS01475 -1.6 -0.9 signal recognition particle-docking protein FtsY compare
MMJJ_RS06380 -1.6 -2.6 signal recognition particle protein Srp54 compare
MMJJ_RS03125 -1.6 -2.6 GMC oxidoreductase compare
MMJJ_RS05225 -1.5 -0.9 Gar1/Naf1 family protein compare
MMJJ_RS06635 -1.5 -8.2 4Fe-4S binding protein compare
MMJJ_RS07160 -1.5 -10.1 M20 family metallo-hydrolase compare
MMJJ_RS03670 -1.5 -2.5 precorrin-2 C(20)-methyltransferase compare
MMJJ_RS03930 -1.5 -7.6 hypothetical protein compare
MMJJ_RS03875 -1.5 -2.0 CBS domain-containing protein compare
MMJJ_RS04010 -1.5 -5.5 archaeal proteasome endopeptidase complex subunit alpha compare
MMJJ_RS05710 -1.5 -3.2 single-stranded-DNA-specific exonuclease RecJ compare
MMJJ_RS07970 -1.5 -1.5 O-phospho-L-seryl-tRNA:Cys-tRNA synthase compare
MMJJ_RS07155 -1.5 -5.5 [5-(aminomethyl)furan-3-yl]methyl phosphate kinase compare
MMJJ_RS06485 -1.5 -1.2 phosphoglycerate kinase compare
MMJJ_RS08055 -1.5 -3.2 methanogenesis marker 14 protein compare
MMJJ_RS09130 -1.4 -1.0 NFYB/HAP3 family transcription factor subunit compare
MMJJ_RS05935 -1.4 -1.3 Era-like GTP-binding protein compare
MMJJ_RS01415 -1.4 -1.1 beta-CASP ribonuclease aCPSF1 compare
MMJJ_RS01925 -1.4 -5.6 fibrillarin-like rRNA/tRNA 2'-O-methyltransferase compare
MMJJ_RS09035 -1.4 -2.2 OB-fold nucleic acid binding domain-containing protein compare
MMJJ_RS09030 -1.4 -8.6 hypothetical protein compare
MMJJ_RS07630 -1.4 -7.7 hypothetical protein compare
MMJJ_RS00570 -1.4 -0.9 ribonuclease P compare
MMJJ_RS09175 -1.4 -0.6 anthranilate synthase component I compare
MMJJ_RS03150 -1.4 -3.8 2-phospho-L-lactate transferase compare
MMJJ_RS07980 -1.4 -6.8 biotin synthase BioB compare
MMJJ_RS06155 -1.4 -2.8 phosphatidylglycerophosphatase A compare
MMJJ_RS08620 -1.4 -2.9 DUF373 family protein compare
MMJJ_RS05420 -1.4 -2.2 DNA-directed DNA polymerase II small subunit compare
MMJJ_RS07275 -1.4 -1.5 formate--phosphoribosylaminoimidazolecarboxamide ligase compare
MMJJ_RS06150 -1.4 -3.1 DUF483 domain-containing protein compare
MMJJ_RS04505 -1.3 -3.9 CDC48 family AAA ATPase compare
MMJJ_RS00275 -1.3 -0.8 coenzyme F420-0:L-glutamate ligase compare
MMJJ_RS04755 -1.3 -5.3 5,10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdB compare
MMJJ_RS04155 -1.3 -3.2 hypothetical protein compare
MMJJ_RS05770 -1.3 -1.5 flagellar protein D compare
MMJJ_RS01755 -1.3 -1.0 ferrous iron transport protein B compare
MMJJ_RS08330 -1.3 -1.7 SufD family Fe-S cluster assembly protein compare
MMJJ_RS00370 -1.3 -0.7 asparagine synthase (glutamine-hydrolyzing) compare
MMJJ_RS03615 -1.3 -1.3 cobalt-precorrin-8 methylmutase compare
MMJJ_RS00550 -1.3 -5.1 AIR synthase-related protein compare
MMJJ_RS01360 -1.3 -1.4 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
MMJJ_RS00285 -1.3 -7.2 UPF0254 family protein compare
MMJJ_RS00480 -1.3 -7.3 flippase compare
MMJJ_RS08095 -1.3 -2.5 cobyric acid synthase CobQ compare
MMJJ_RS05170 -1.3 -5.0 Nif3-like dinuclear metal center hexameric protein compare
MMJJ_RS06110 -1.3 -1.4 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC compare
MMJJ_RS07370 -1.3 -3.3 tRNA 4-thiouridine(8) synthase ThiI compare
MMJJ_RS05560 -1.3 -2.7 30S ribosomal protein S27e compare
MMJJ_RS06715 -1.2 -7.5 lactaldehyde dehydrogenase compare
MMJJ_RS00150 -1.2 -5.3 DUF2180 family protein compare
MMJJ_RS09085 -1.2 -6.0 minichromosome maintenance protein MCM compare
MMJJ_RS05720 -1.2 -1.3 glutamine--fructose-6-phosphate transaminase (isomerizing) compare
MMJJ_RS05780 -1.2 -1.8 flagellin compare
MMJJ_RS07955 -1.2 -5.1 ThiF family adenylyltransferase compare
MMJJ_RS03080 -1.2 -6.1 carbohydrate kinase family protein compare


Specific Phenotypes

For 1 genes in this experiment