Experiment set8S567 for Methanococcus maripaludis JJ

Compare to:

McCas_formate_complete no stress control

200 most important genes:

  gene name fitness t score description  
MMJJ_RS00040 -4.0 -6.5 CO dehydrogenase/acetyl-CoA synthase complex subunit epsilon compare
MMJJ_RS02040 -4.0 -1.0 Asp-tRNA(Asn) amidotransferase subunit GatC compare
MMJJ_RS07960 -3.9 -1.2 quinolinate synthase NadA compare
MMJJ_RS00050 -3.9 -8.7 AAA family ATPase compare
MMJJ_RS05135 -3.9 -0.8 50S ribosomal protein L18Ae compare
MMJJ_RS07970 -3.8 -0.9 O-phospho-L-seryl-tRNA:Cys-tRNA synthase compare
MMJJ_RS04485 -3.8 -6.5 riboflavin synthase compare
MMJJ_RS00035 -3.7 -20.4 CO dehydrogenase/acetyl-CoA synthase complex subunit alpha compare
MMJJ_RS07360 -3.7 -0.9 TIGR00269 family protein compare
MMJJ_RS00075 -3.6 -10.0 AAA family ATPase compare
MMJJ_RS00055 -3.6 -9.4 CO dehydrogenase/acetyl-CoA synthase subunit delta compare
MMJJ_RS00060 -3.5 -16.4 acetyl-CoA decarbonylase/synthase complex subunit gamma compare
MMJJ_RS04720 -3.5 -0.7 IMP dehydrogenase compare
MMJJ_RS04750 -3.5 -10.1 5,10-methenyltetrahydromethanopterin hydrogenase compare
MMJJ_RS00080 -3.3 -13.5 DUF166 domain-containing protein compare
MMJJ_RS03360 -3.3 -0.6 hypothetical protein compare
MMJJ_RS03115 -3.3 -3.2 sulfopyruvate decarboxylase subunit alpha compare
MMJJ_RS06600 -3.3 -1.0 DUF555 domain-containing protein compare
MMJJ_RS07505 -3.2 -0.6 DNA-directed RNA polymerase subunit K compare
MMJJ_RS00580 -3.2 -0.8 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase subunit CofG compare
MMJJ_RS07470 -3.2 -0.9 50S ribosome-binding GTPase compare
MMJJ_RS04875 -3.2 -0.8 tRNA-Lys compare
MMJJ_RS08320 -3.2 -1.4 CDP-diacylglycerol--serine O-phosphatidyltransferase compare
MMJJ_RS09175 -3.2 -0.6 anthranilate synthase component I compare
MMJJ_RS00045 -3.1 -14.4 CO dehydrogenase/CO-methylating acetyl-CoA synthase complex subunit beta compare
MMJJ_RS00935 -3.1 -11.6 nickel pincer cofactor biosynthesis protein LarB compare
MMJJ_RS00570 -3.0 -0.7 ribonuclease P compare
MMJJ_RS03920 -3.0 -13.8 nickel pincer cofactor biosynthesis protein LarC compare
MMJJ_RS05590 -3.0 -0.8 homoserine dehydrogenase compare
MMJJ_RS05065 -3.0 -2.3 (4-{4-[2-(gamma-L- glutamylamino)ethyl]phenoxymethyl}furan-2-yl)methanamine synthase compare
MMJJ_RS05360 -3.0 -5.1 nickel-responsive transcriptional regulator NikR compare
MMJJ_RS01810 -3.0 -1.0 methyl coenzyme M reductase system, component A2 compare
MMJJ_RS09375 -3.0 -0.7 hypothetical protein compare
MMJJ_RS01690 -2.9 -1.2 methanogenesis marker 12 protein compare
MMJJ_RS00065 -2.9 -8.0 4Fe-4S dicluster domain-containing protein compare
MMJJ_RS04760 -2.9 -15.2 5,10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdC compare
MMJJ_RS06910 -2.9 -1.0 energy-converting NiFe hydrogenase A subunit EhaA compare
MMJJ_RS07975 -2.9 -8.9 ATP-dependent sacrificial sulfur transferase LarE compare
MMJJ_RS08575 -2.9 -2.5 hypothetical protein compare
MMJJ_RS04730 -2.9 -1.1 tyrosine decarboxylase MfnA compare
MMJJ_RS04970 -2.9 -0.8 DUF655 domain-containing protein compare
MMJJ_RS03185 -2.8 -1.1 alanine--tRNA ligase compare
MMJJ_RS05280 -2.8 -0.6 hypothetical protein compare
MMJJ_RS07950 -2.8 -1.0 4Fe-4S binding protein compare
MMJJ_RS07035 -2.8 -0.9 glycosyl transferase compare
MMJJ_RS08340 -2.7 -3.1 archaeoflavoprotein AfpA compare
MMJJ_RS02665 -2.7 -2.1 methyl-accepting chemotaxis protein compare
MMJJ_RS05190 -2.7 -5.2 gamma carbonic anhydrase family protein compare
MMJJ_RS07000 -2.7 -0.7 TrkH family potassium uptake protein compare
MMJJ_RS05535 -2.7 -10.7 hypothetical protein compare
MMJJ_RS06915 -2.7 -10.8 helix-turn-helix domain-containing protein compare
MMJJ_RS09035 -2.6 -3.4 OB-fold nucleic acid binding domain-containing protein compare
MMJJ_RS07410 -2.6 -1.6 methanogenesis marker protein Mmp4/MtxX compare
MMJJ_RS08430 -2.6 -4.7 small nuclear ribonucleoprotein compare
MMJJ_RS04755 -2.6 -6.9 5,10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdB compare
MMJJ_RS06695 -2.6 -0.9 amidohydrolase compare
MMJJ_RS08080 -2.5 -8.9 TIGR00300 family protein compare
MMJJ_RS03965 -2.5 -0.6 DNA-directed RNA polymerase subunit L compare
MMJJ_RS03095 -2.5 -0.9 bifunctional N(6)-L-threonylcarbamoyladenine synthase/serine/threonine protein kinase compare
MMJJ_RS07955 -2.5 -6.9 ThiF family adenylyltransferase compare
MMJJ_RS08620 -2.5 -2.4 DUF373 family protein compare
MMJJ_RS06110 -2.5 -0.9 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC compare
MMJJ_RS00355 -2.5 -1.5 ribonuclease P protein component 4 compare
MMJJ_RS00285 -2.5 -10.9 UPF0254 family protein compare
MMJJ_RS06860 -2.4 -1.3 hypothetical protein compare
MMJJ_RS06750 -2.4 -0.8 homoaconitase large subunit compare
MMJJ_RS08500 -2.4 -4.3 L-sulfolactate dehydrogenase compare
MMJJ_RS04770 -2.4 -1.5 formate-dependent phosphoribosylglycinamide formyltransferase compare
MMJJ_RS06200 -2.4 -0.7 phosphoglycerate dehydrogenase compare
MMJJ_RS09135 -2.4 -6.8 archaeosine biosynthesis radical SAM protein RaSEA compare
MMJJ_RS05575 -2.4 -1.7 2-amino-5-formylamino-6-ribosylaminopyrimidin- 4(3H)-one 5'-monophosphate deformylase compare
MMJJ_RS05770 -2.4 -1.4 flagellar protein D compare
MMJJ_RS03270 -2.4 -1.1 ribosome biogenesis/translation initiation ATPase RLI compare
MMJJ_RS06665 -2.3 -4.0 DUF3236 domain-containing protein compare
MMJJ_RS06725 -2.3 -9.6 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMJJ_RS00210 -2.3 -1.0 DUF530 family protein compare
MMJJ_RS05995 -2.3 -0.7 ATP-binding cassette domain-containing protein compare
MMJJ_RS03490 -2.3 -1.2 ribonuclease VapC compare
MMJJ_RS01880 -2.3 -1.8 RlmE family RNA methyltransferase compare
MMJJ_RS02035 -2.3 -3.7 4-hydroxy-tetrahydrodipicolinate synthase compare
MMJJ_RS03110 -2.3 -2.1 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase compare
MMJJ_RS06835 -2.3 -9.6 4Fe-4S binding protein compare
MMJJ_RS08625 -2.3 -4.0 magnesium/cobalt transporter CorA compare
MMJJ_RS06660 -2.2 -5.3 DUF1188 domain-containing protein compare
MMJJ_RS01820 -2.2 -3.5 MJ1244 family protein compare
MMJJ_RS06855 -2.2 -0.5 DUF2104 domain-containing protein compare
MMJJ_RS00450 -2.2 -1.0 DUF126 domain-containing protein compare
MMJJ_RS04655 -2.2 -4.4 FAD-dependent oxidoreductase compare
MMJJ_RS05720 -2.2 -0.8 glutamine--fructose-6-phosphate transaminase (isomerizing) compare
MMJJ_RS08335 -2.2 -0.8 ABC transporter ATP-binding protein compare
MMJJ_RS00550 -2.1 -7.4 AIR synthase-related protein compare
MMJJ_RS08535 -2.1 -1.9 NOL1/NOP2/sun family putative RNA methylase compare
MMJJ_RS03200 -2.1 -0.6 uroporphyrinogen-III synthase compare
MMJJ_RS06705 -2.1 -2.4 bifunctional NADP phosphatase/NAD kinase compare
MMJJ_RS06875 -2.1 -0.9 hypothetical protein compare
MMJJ_RS06255 -2.1 -3.0 tRNA uridine(34) 5-carboxymethylaminomethyl modification radical SAM/GNAT enzyme Elp3 compare
MMJJ_RS09295 -2.0 -0.5 hypothetical protein compare
MMJJ_RS00560 -2.0 -1.2 homoisocitrate dehydrogenase compare
MMJJ_RS05765 -2.0 -0.5 flagellar protein E compare
MMJJ_RS00525 -2.0 -1.4 Dabb family protein compare
MMJJ_RS06390 -2.0 -0.6 NADPH-dependent F420 reductase compare
MMJJ_RS09405 -2.0 -2.3 hypothetical protein compare
MMJJ_RS07945 -2.0 -0.7 4Fe-4S binding protein compare
MMJJ_RS06930 -2.0 -1.1 type II methionyl aminopeptidase compare
MMJJ_RS01360 -2.0 -0.9 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
MMJJ_RS04685 -2.0 -4.3 carbamoyltransferase HypF compare
MMJJ_RS07980 -1.9 -8.5 biotin synthase BioB compare
MMJJ_RS04475 -1.9 -2.1 3,4-dihydroxy-2-butanone-4-phosphate synthase compare
MMJJ_RS07155 -1.9 -6.6 [5-(aminomethyl)furan-3-yl]methyl phosphate kinase compare
MMJJ_RS00645 -1.9 -8.4 adenosylmethionine--8-amino-7-oxononanoate transaminase compare
MMJJ_RS05155 -1.9 -2.7 5-amino-6-(D-ribitylamino)uracil--L-tyrosine 4-hydroxyphenyl transferase CofH compare
MMJJ_RS04200 -1.9 -2.6 triphosphoribosyl-dephospho-CoA synthase compare
MMJJ_RS04565 -1.9 -1.3 sirohydrochlorin nickelochelatase compare
MMJJ_RS03190 -1.9 -0.8 phosphopyruvate hydratase compare
MMJJ_RS00270 -1.9 -0.7 adenosylcobinamide-GDP ribazoletransferase compare
MMJJ_RS01405 -1.9 -0.6 proline--tRNA ligase compare
MMJJ_RS06270 -1.9 -5.7 dethiobiotin synthase compare
MMJJ_RS03670 -1.9 -1.6 precorrin-2 C(20)-methyltransferase compare
MMJJ_RS02200 -1.9 -5.5 chorismate pyruvate-lyase family protein compare
MMJJ_RS03765 -1.9 -3.7 hypothetical protein compare
MMJJ_RS06180 -1.8 -1.0 tryptophan--tRNA ligase compare
MMJJ_RS07825 -1.8 -3.5 YciI family protein compare
MMJJ_RS06220 -1.8 -2.8 polyamine aminopropyltransferase compare
MMJJ_RS08020 -1.8 -4.5 nucleotidyltransferase domain-containing protein compare
MMJJ_RS06635 -1.8 -8.1 4Fe-4S binding protein compare
MMJJ_RS03250 -1.8 -1.6 DUF2116 family Zn-ribbon domain-containing protein compare
MMJJ_RS03380 -1.8 -2.8 hypothetical protein compare
MMJJ_RS00430 -1.8 -1.1 ribonuclease Z compare
MMJJ_RS01355 -1.8 -1.1 UDP-N-acetyl-D-mannosamine dehydrogenase compare
MMJJ_RS07380 -1.8 -4.9 sulfide-dependent adenosine diphosphate thiazole synthase compare
MMJJ_RS09120 -1.8 -0.7 aspartate kinase compare
MMJJ_RS04980 -1.8 -2.3 bifunctional precorrin-2 dehydrogenase/sirohydrochlorin ferrochelatase compare
MMJJ_RS04800 -1.8 -2.8 2-phospho-L-lactate guanylyltransferase compare
MMJJ_RS04110 -1.8 -4.7 hypothetical protein compare
MMJJ_RS06260 -1.8 -3.9 6-carboxyhexanoate--CoA ligase compare
MMJJ_RS02045 -1.8 -1.1 molybdenum cofactor guanylyltransferase compare
MMJJ_RS00125 -1.8 -0.9 KEOPS complex subunit Cgi121 compare
MMJJ_RS04700 -1.8 -3.7 deoxyhypusine synthase compare
MMJJ_RS05655 -1.7 -4.7 HisA/HisF family protein compare
MMJJ_RS03245 -1.7 -0.6 UMP kinase compare
MMJJ_RS07190 -1.7 -2.0 RtcB family protein compare
MMJJ_RS04520 -1.7 -2.0 coenzyme F430 synthase compare
MMJJ_RS06375 -1.7 -1.8 UbiX family flavin prenyltransferase compare
MMJJ_RS06185 -1.7 -2.6 cobalamin biosynthesis protein compare
MMJJ_RS08585 -1.7 -3.9 M42 family metallopeptidase compare
MMJJ_RS03810 -1.7 -1.6 AIR synthase-related protein compare
MMJJ_RS08010 -1.7 -4.1 phosphoadenosine phosphosulfate reductase family protein compare
MMJJ_RS05650 -1.7 -0.7 formylmethanofuran dehydrogenase subunit B compare
MMJJ_RS06240 -1.7 -1.0 dihydropteroate synthase-like protein compare
MMJJ_RS07425 -1.7 -6.6 MBL fold metallo-hydrolase compare
MMJJ_RS03785 -1.7 -1.0 hypothetical protein compare
MMJJ_RS01870 -1.7 -0.5 methanogenesis marker 15 protein compare
MMJJ_RS00220 -1.7 -3.7 UPF0058 family protein compare
MMJJ_RS08490 -1.7 -1.9 rubrerythrin family protein compare
MMJJ_RS03195 -1.7 -2.6 hypothetical protein compare
MMJJ_RS04595 -1.7 -1.9 hypothetical protein compare
MMJJ_RS07345 -1.7 -4.4 homocysteine biosynthesis protein compare
MMJJ_RS01925 -1.6 -4.0 fibrillarin-like rRNA/tRNA 2'-O-methyltransferase compare
MMJJ_RS03930 -1.6 -7.5 hypothetical protein compare
MMJJ_RS05710 -1.6 -2.3 single-stranded-DNA-specific exonuclease RecJ compare
MMJJ_RS07245 -1.6 -2.5 amidohydrolase family protein compare
MMJJ_RS05070 -1.6 -0.5 DNA primase catalytic subunit PriS compare
MMJJ_RS08660 -1.6 -1.4 acetylornithine transaminase compare
MMJJ_RS03060 -1.6 -0.8 methanogenesis marker 7 protein compare
MMJJ_RS05375 -1.6 -8.9 radical SAM protein compare
MMJJ_RS03150 -1.6 -2.3 2-phospho-L-lactate transferase compare
MMJJ_RS07160 -1.6 -8.9 M20 family metallo-hydrolase compare
MMJJ_RS08935 -1.6 -0.5 TIGR00288 family NYN domain-containing protein compare
MMJJ_RS04010 -1.6 -6.1 archaeal proteasome endopeptidase complex subunit alpha compare
MMJJ_RS06715 -1.6 -6.3 lactaldehyde dehydrogenase compare
MMJJ_RS02855 -1.6 -3.8 DEAD/DEAH box helicase compare
MMJJ_RS00345 -1.6 -6.0 4-hydroxy-tetrahydrodipicolinate reductase compare
MMJJ_RS03760 -1.6 -1.1 hydrogenase maturation nickel metallochaperone HypA compare
MMJJ_RS01285 -1.5 -2.2 CopG family ribbon-helix-helix protein compare
MMJJ_RS08035 -1.5 -3.6 cobalt-precorrin-7 (C(5))-methyltransferase compare
MMJJ_RS05195 -1.5 -2.5 hypothetical protein compare
MMJJ_RS07590 -1.5 -5.1 flap endonuclease-1 compare
MMJJ_RS00600 -1.5 -1.0 hydroxymethylbilane synthase compare
MMJJ_RS04050 -1.5 -0.5 dihydroneopterin aldolase family protein compare
MMJJ_RS01500 -1.5 -4.2 transcriptional regulator compare
MMJJ_RS04790 -1.5 -1.4 biotin--[acetyl-CoA-carboxylase] ligase compare
MMJJ_RS08795 -1.5 -0.7 phosphoglucosamine mutase compare
MMJJ_RS08810 -1.5 -0.5 DUF4040 domain-containing protein compare
MMJJ_RS04995 -1.5 -2.6 Tfx family DNA-binding protein compare
MMJJ_RS04975 -1.5 -0.6 glycosyltransferase family 4 protein compare
MMJJ_RS06905 -1.5 -0.7 hypothetical protein compare
MMJJ_RS01865 -1.5 -1.9 peptidyl-tRNA hydrolase Pth2 compare
MMJJ_RS04180 -1.4 -1.1 metalloregulator ArsR/SmtB family transcription factor compare
MMJJ_RS05415 -1.4 -0.6 hypothetical protein compare
MMJJ_RS09030 -1.4 -6.2 hypothetical protein compare
MMJJ_RS00205 -1.4 -2.2 adenosylcobinamide-phosphate synthase CbiB compare
MMJJ_RS07715 -1.4 -1.4 UbiD family decarboxylase compare
MMJJ_RS07040 -1.4 -0.7 preprotein translocase subunit SecY compare
MMJJ_RS03170 -1.4 -3.3 DUF5612 domain-containing protein compare
MMJJ_RS05260 -1.4 -2.0 ATP-grasp domain-containing protein compare
MMJJ_RS03125 -1.4 -1.6 GMC oxidoreductase compare
MMJJ_RS01085 -1.4 -2.2 hypothetical protein compare
MMJJ_RS01750 -1.4 -0.6 ferrous iron transport protein A compare
MMJJ_RS06265 -1.4 -6.4 8-amino-7-oxononanoate synthase compare
MMJJ_RS08345 -1.4 -6.5 flavodoxin family protein compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis JJ in no stress control experiments