Experiment set8S558 for Methanococcus maripaludis JJ

Compare to:

McCas_formate_complete sodium bromide 125 mM

200 most important genes:

  gene name fitness t score description  
MMJJ_RS05135 -4.8 -0.6 50S ribosomal protein L18Ae compare
MMJJ_RS00055 -4.5 -7.6 CO dehydrogenase/acetyl-CoA synthase subunit delta compare
MMJJ_RS07505 -4.2 -0.5 DNA-directed RNA polymerase subunit K compare
MMJJ_RS04595 -4.0 -2.5 hypothetical protein compare
MMJJ_RS00045 -3.9 -13.7 CO dehydrogenase/CO-methylating acetyl-CoA synthase complex subunit beta compare
MMJJ_RS08010 -3.9 -4.6 phosphoadenosine phosphosulfate reductase family protein compare
MMJJ_RS02040 -3.8 -0.8 Asp-tRNA(Asn) amidotransferase subunit GatC compare
MMJJ_RS07960 -3.7 -1.0 quinolinate synthase NadA compare
MMJJ_RS04875 -3.7 -0.6 tRNA-Lys compare
MMJJ_RS00080 -3.7 -14.0 DUF166 domain-containing protein compare
MMJJ_RS00060 -3.7 -15.6 acetyl-CoA decarbonylase/synthase complex subunit gamma compare
MMJJ_RS06665 -3.7 -3.4 DUF3236 domain-containing protein compare
MMJJ_RS04760 -3.6 -17.5 5,10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdC compare
MMJJ_RS00050 -3.6 -7.6 AAA family ATPase compare
MMJJ_RS00040 -3.6 -6.1 CO dehydrogenase/acetyl-CoA synthase complex subunit epsilon compare
MMJJ_RS05770 -3.4 -1.0 flagellar protein D compare
MMJJ_RS04475 -3.4 -1.3 3,4-dihydroxy-2-butanone-4-phosphate synthase compare
MMJJ_RS04755 -3.3 -10.8 5,10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdB compare
MMJJ_RS04485 -3.3 -5.9 riboflavin synthase compare
MMJJ_RS00450 -3.2 -0.8 DUF126 domain-containing protein compare
MMJJ_RS00075 -3.2 -9.7 AAA family ATPase compare
MMJJ_RS03490 -3.2 -0.8 ribonuclease VapC compare
MMJJ_RS04750 -3.2 -9.2 5,10-methenyltetrahydromethanopterin hydrogenase compare
MMJJ_RS09175 -3.2 -0.6 anthranilate synthase component I compare
MMJJ_RS00935 -3.1 -10.2 nickel pincer cofactor biosynthesis protein LarB compare
MMJJ_RS00580 -3.1 -0.7 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase subunit CofG compare
MMJJ_RS07975 -3.1 -6.2 ATP-dependent sacrificial sulfur transferase LarE compare
MMJJ_RS03270 -3.1 -0.8 ribosome biogenesis/translation initiation ATPase RLI compare
MMJJ_RS06600 -3.0 -0.8 DUF555 domain-containing protein compare
MMJJ_RS07970 -3.0 -1.1 O-phospho-L-seryl-tRNA:Cys-tRNA synthase compare
MMJJ_RS07470 -3.0 -0.7 50S ribosome-binding GTPase compare
MMJJ_RS00035 -3.0 -11.3 CO dehydrogenase/acetyl-CoA synthase complex subunit alpha compare
MMJJ_RS00570 -3.0 -0.6 ribonuclease P compare
MMJJ_RS05065 -3.0 -2.0 (4-{4-[2-(gamma-L- glutamylamino)ethyl]phenoxymethyl}furan-2-yl)methanamine synthase compare
MMJJ_RS01810 -3.0 -0.9 methyl coenzyme M reductase system, component A2 compare
MMJJ_RS03920 -2.9 -12.2 nickel pincer cofactor biosynthesis protein LarC compare
MMJJ_RS03810 -2.9 -1.2 AIR synthase-related protein compare
MMJJ_RS07935 -2.9 -0.5 protein fwdD compare
MMJJ_RS09375 -2.8 -0.6 hypothetical protein compare
MMJJ_RS06875 -2.8 -0.8 hypothetical protein compare
MMJJ_RS05535 -2.8 -9.6 hypothetical protein compare
MMJJ_RS00065 -2.8 -7.8 4Fe-4S dicluster domain-containing protein compare
MMJJ_RS07360 -2.8 -0.8 TIGR00269 family protein compare
MMJJ_RS00070 -2.8 -2.0 CooT family nickel-binding protein compare
MMJJ_RS08585 -2.8 -6.2 M42 family metallopeptidase compare
MMJJ_RS06915 -2.8 -10.8 helix-turn-helix domain-containing protein compare
MMJJ_RS05380 -2.7 -0.5 hypothetical protein compare
MMJJ_RS05190 -2.7 -4.5 gamma carbonic anhydrase family protein compare
MMJJ_RS08500 -2.7 -4.7 L-sulfolactate dehydrogenase compare
MMJJ_RS04970 -2.7 -0.7 DUF655 domain-containing protein compare
MMJJ_RS03115 -2.7 -3.0 sulfopyruvate decarboxylase subunit alpha compare
MMJJ_RS04770 -2.7 -1.2 formate-dependent phosphoribosylglycinamide formyltransferase compare
MMJJ_RS05155 -2.7 -2.1 5-amino-6-(D-ribitylamino)uracil--L-tyrosine 4-hydroxyphenyl transferase CofH compare
MMJJ_RS07950 -2.7 -0.9 4Fe-4S binding protein compare
MMJJ_RS04730 -2.7 -0.9 tyrosine decarboxylase MfnA compare
MMJJ_RS06910 -2.6 -0.8 energy-converting NiFe hydrogenase A subunit EhaA compare
MMJJ_RS07715 -2.6 -1.2 UbiD family decarboxylase compare
MMJJ_RS07415 -2.6 -0.8 polyprenyl diphosphate synthase compare
MMJJ_RS00285 -2.6 -11.2 UPF0254 family protein compare
MMJJ_RS06660 -2.6 -5.5 DUF1188 domain-containing protein compare
MMJJ_RS00210 -2.6 -0.7 DUF530 family protein compare
MMJJ_RS02035 -2.6 -4.3 4-hydroxy-tetrahydrodipicolinate synthase compare
MMJJ_RS07410 -2.6 -1.0 methanogenesis marker protein Mmp4/MtxX compare
MMJJ_RS08625 -2.6 -3.3 magnesium/cobalt transporter CorA compare
MMJJ_RS08575 -2.6 -2.0 hypothetical protein compare
MMJJ_RS01865 -2.5 -3.7 peptidyl-tRNA hydrolase Pth2 compare
MMJJ_RS07035 -2.5 -0.7 glycosyl transferase compare
MMJJ_RS08430 -2.5 -4.3 small nuclear ribonucleoprotein compare
MMJJ_RS05765 -2.5 -0.4 flagellar protein E compare
MMJJ_RS00550 -2.5 -8.5 AIR synthase-related protein compare
MMJJ_RS07000 -2.4 -0.6 TrkH family potassium uptake protein compare
MMJJ_RS02200 -2.4 -4.8 chorismate pyruvate-lyase family protein compare
MMJJ_RS08080 -2.4 -7.1 TIGR00300 family protein compare
MMJJ_RS06225 -2.4 -0.7 adenosylmethionine decarboxylase compare
MMJJ_RS03185 -2.4 -1.0 alanine--tRNA ligase compare
MMJJ_RS02090 -2.3 -1.5 tyramine--L-glutamate ligase compare
MMJJ_RS06260 -2.3 -4.2 6-carboxyhexanoate--CoA ligase compare
MMJJ_RS06695 -2.3 -0.8 amidohydrolase compare
MMJJ_RS02935 -2.3 -1.3 DNA-directed RNA polymerase subunit E'' compare
MMJJ_RS07955 -2.3 -6.6 ThiF family adenylyltransferase compare
MMJJ_RS03785 -2.3 -0.8 hypothetical protein compare
MMJJ_RS02915 -2.3 -5.3 hypothetical protein compare
MMJJ_RS03230 -2.3 -1.9 NAD(P)/FAD-dependent oxidoreductase compare
MMJJ_RS06110 -2.3 -0.7 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC compare
MMJJ_RS01830 -2.3 -0.8 tRNA(Ile)(2)-agmatinylcytidine synthase compare
MMJJ_RS01690 -2.2 -1.4 methanogenesis marker 12 protein compare
MMJJ_RS04700 -2.2 -2.8 deoxyhypusine synthase compare
MMJJ_RS00430 -2.2 -1.3 ribonuclease Z compare
MMJJ_RS06750 -2.2 -0.6 homoaconitase large subunit compare
MMJJ_RS01405 -2.2 -0.6 proline--tRNA ligase compare
MMJJ_RS06885 -2.2 -0.8 EhaF family protein compare
MMJJ_RS09135 -2.1 -5.3 archaeosine biosynthesis radical SAM protein RaSEA compare
MMJJ_RS05170 -2.1 -7.7 Nif3-like dinuclear metal center hexameric protein compare
MMJJ_RS07190 -2.1 -1.6 RtcB family protein compare
MMJJ_RS00355 -2.1 -1.3 ribonuclease P protein component 4 compare
MMJJ_RS04980 -2.1 -2.0 bifunctional precorrin-2 dehydrogenase/sirohydrochlorin ferrochelatase compare
MMJJ_RS04565 -2.1 -0.9 sirohydrochlorin nickelochelatase compare
MMJJ_RS08020 -2.1 -5.0 nucleotidyltransferase domain-containing protein compare
MMJJ_RS07380 -2.1 -5.0 sulfide-dependent adenosine diphosphate thiazole synthase compare
MMJJ_RS03310 -2.1 -0.8 hypothetical protein compare
MMJJ_RS07350 -2.1 -1.0 4Fe-4S binding protein compare
MMJJ_RS04995 -2.1 -2.6 Tfx family DNA-binding protein compare
MMJJ_RS03095 -2.1 -0.8 bifunctional N(6)-L-threonylcarbamoyladenine synthase/serine/threonine protein kinase compare
MMJJ_RS07245 -2.0 -2.0 amidohydrolase family protein compare
MMJJ_RS06705 -2.0 -1.9 bifunctional NADP phosphatase/NAD kinase compare
MMJJ_RS05655 -2.0 -4.5 HisA/HisF family protein compare
MMJJ_RS08340 -2.0 -3.1 archaeoflavoprotein AfpA compare
MMJJ_RS01100 -2.0 -0.9 helix-turn-helix domain-containing protein compare
MMJJ_RS04010 -2.0 -5.3 archaeal proteasome endopeptidase complex subunit alpha compare
MMJJ_RS06635 -2.0 -9.6 4Fe-4S binding protein compare
MMJJ_RS02860 -2.0 -1.5 site-specific integrase compare
MMJJ_RS00215 -2.0 -0.6 CCA tRNA nucleotidyltransferase compare
MMJJ_RS04790 -2.0 -0.7 biotin--[acetyl-CoA-carboxylase] ligase compare
MMJJ_RS07345 -2.0 -3.8 homocysteine biosynthesis protein compare
MMJJ_RS06725 -2.0 -8.8 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMJJ_RS06835 -2.0 -8.4 4Fe-4S binding protein compare
MMJJ_RS07155 -2.0 -6.0 [5-(aminomethyl)furan-3-yl]methyl phosphate kinase compare
MMJJ_RS04800 -2.0 -2.2 2-phospho-L-lactate guanylyltransferase compare
MMJJ_RS09265 -2.0 -1.2 hypothetical protein compare
MMJJ_RS06030 -2.0 -2.5 4Fe-4S binding protein compare
MMJJ_RS06855 -2.0 -0.4 DUF2104 domain-containing protein compare
MMJJ_RS05720 -1.9 -0.6 glutamine--fructose-6-phosphate transaminase (isomerizing) compare
MMJJ_RS01355 -1.9 -0.7 UDP-N-acetyl-D-mannosamine dehydrogenase compare
MMJJ_RS05610 -1.9 -1.7 CDP-2,3-bis-(O-geranylgeranyl)-sn-glycerol synthase compare
MMJJ_RS07705 -1.9 -0.7 GTP-binding protein EngB compare
MMJJ_RS06375 -1.9 -1.8 UbiX family flavin prenyltransferase compare
MMJJ_RS05575 -1.9 -1.4 2-amino-5-formylamino-6-ribosylaminopyrimidin- 4(3H)-one 5'-monophosphate deformylase compare
MMJJ_RS06155 -1.9 -2.2 phosphatidylglycerophosphatase A compare
MMJJ_RS06255 -1.9 -2.8 tRNA uridine(34) 5-carboxymethylaminomethyl modification radical SAM/GNAT enzyme Elp3 compare
MMJJ_RS07945 -1.8 -0.6 4Fe-4S binding protein compare
MMJJ_RS00645 -1.8 -7.2 adenosylmethionine--8-amino-7-oxononanoate transaminase compare
MMJJ_RS06760 -1.8 -1.2 Ni-sirohydrochlorin a,c-diamide synthase compare
MMJJ_RS06180 -1.8 -0.6 tryptophan--tRNA ligase compare
MMJJ_RS03425 -1.8 -2.7 DUF2080 family transposase-associated protein compare
MMJJ_RS03875 -1.8 -0.7 CBS domain-containing protein compare
MMJJ_RS09130 -1.8 -0.6 NFYB/HAP3 family transcription factor subunit compare
MMJJ_RS06860 -1.8 -1.2 hypothetical protein compare
MMJJ_RS00480 -1.8 -7.0 flippase compare
MMJJ_RS05360 -1.8 -3.3 nickel-responsive transcriptional regulator NikR compare
MMJJ_RS00270 -1.8 -0.6 adenosylcobinamide-GDP ribazoletransferase compare
MMJJ_RS05560 -1.8 -2.6 30S ribosomal protein S27e compare
MMJJ_RS06935 -1.7 -5.0 GTP-binding protein compare
MMJJ_RS08535 -1.7 -1.2 NOL1/NOP2/sun family putative RNA methylase compare
MMJJ_RS05195 -1.7 -2.6 hypothetical protein compare
MMJJ_RS07425 -1.7 -6.5 MBL fold metallo-hydrolase compare
MMJJ_RS04520 -1.7 -1.6 coenzyme F430 synthase compare
MMJJ_RS09085 -1.7 -6.3 minichromosome maintenance protein MCM compare
MMJJ_RS00220 -1.7 -3.2 UPF0058 family protein compare
MMJJ_RS07040 -1.7 -0.7 preprotein translocase subunit SecY compare
MMJJ_RS05780 -1.7 -1.1 flagellin compare
MMJJ_RS09295 -1.7 -0.4 hypothetical protein compare
MMJJ_RS05445 -1.7 -0.4 2-oxoacid:acceptor oxidoreductase subunit alpha compare
MMJJ_RS05420 -1.7 -1.2 DNA-directed DNA polymerase II small subunit compare
MMJJ_RS03760 -1.7 -0.6 hydrogenase maturation nickel metallochaperone HypA compare
MMJJ_RS05590 -1.7 -0.9 homoserine dehydrogenase compare
MMJJ_RS03005 -1.7 -0.7 Ni-sirohydrochlorin a,c-diamide reductive cyclase catalytic subunit compare
MMJJ_RS03620 -1.7 -1.5 DUF2097 domain-containing protein compare
MMJJ_RS04685 -1.6 -3.8 carbamoyltransferase HypF compare
MMJJ_RS04200 -1.6 -2.1 triphosphoribosyl-dephospho-CoA synthase compare
MMJJ_RS06185 -1.6 -2.5 cobalamin biosynthesis protein compare
MMJJ_RS07490 -1.6 -1.2 HypC/HybG/HupF family hydrogenase formation chaperone compare
MMJJ_RS08390 -1.6 -2.4 carboxymuconolactone decarboxylase family protein compare
MMJJ_RS00560 -1.6 -1.0 homoisocitrate dehydrogenase compare
MMJJ_RS04125 -1.6 -4.4 tRNA (guanine(10)-N(2))-dimethyltransferase compare
MMJJ_RS08840 -1.6 -1.9 calcium/sodium antiporter compare
MMJJ_RS05375 -1.6 -7.7 radical SAM protein compare
MMJJ_RS05995 -1.6 -0.6 ATP-binding cassette domain-containing protein compare
MMJJ_RS03295 -1.6 -5.7 PHP domain-containing protein compare
MMJJ_RS07160 -1.6 -9.1 M20 family metallo-hydrolase compare
MMJJ_RS06270 -1.6 -4.2 dethiobiotin synthase compare
MMJJ_RS01870 -1.6 -0.4 methanogenesis marker 15 protein compare
MMJJ_RS05935 -1.6 -0.6 Era-like GTP-binding protein compare
MMJJ_RS01415 -1.5 -0.5 beta-CASP ribonuclease aCPSF1 compare
MMJJ_RS06200 -1.5 -0.8 phosphoglycerate dehydrogenase compare
MMJJ_RS08035 -1.5 -3.5 cobalt-precorrin-7 (C(5))-methyltransferase compare
MMJJ_RS01350 -1.5 -2.8 sodium:proton antiporter compare
MMJJ_RS07585 -1.5 -5.4 DHH family phosphoesterase compare
MMJJ_RS08320 -1.5 -1.0 CDP-diacylglycerol--serine O-phosphatidyltransferase compare
MMJJ_RS07980 -1.5 -5.7 biotin synthase BioB compare
MMJJ_RS03765 -1.5 -2.8 hypothetical protein compare
MMJJ_RS08935 -1.5 -0.3 TIGR00288 family NYN domain-containing protein compare
MMJJ_RS04360 -1.5 -3.6 winged helix-turn-helix transcriptional regulator compare
MMJJ_RS05650 -1.5 -0.5 formylmethanofuran dehydrogenase subunit B compare
MMJJ_RS03155 -1.5 -5.1 hypothetical protein compare
MMJJ_RS06040 -1.5 -0.9 NADH-quinone oxidoreductase subunit H compare
MMJJ_RS03635 -1.5 -1.4 methionine--tRNA ligase compare
MMJJ_RS01115 -1.5 -3.7 hypothetical protein compare
MMJJ_RS05070 -1.4 -0.4 DNA primase catalytic subunit PriS compare
MMJJ_RS03060 -1.4 -0.6 methanogenesis marker 7 protein compare
MMJJ_RS08810 -1.4 -0.4 DUF4040 domain-containing protein compare
MMJJ_RS08345 -1.4 -5.7 flavodoxin family protein compare
MMJJ_RS06165 -1.4 -6.7 archaeosine synthase subunit alpha compare
MMJJ_RS01925 -1.4 -3.9 fibrillarin-like rRNA/tRNA 2'-O-methyltransferase compare
MMJJ_RS03125 -1.4 -1.3 GMC oxidoreductase compare
MMJJ_RS00345 -1.4 -4.8 4-hydroxy-tetrahydrodipicolinate reductase compare
MMJJ_RS03110 -1.4 -1.6 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase compare
MMJJ_RS04655 -1.4 -3.2 FAD-dependent oxidoreductase compare
MMJJ_RS08135 -1.4 -2.2 30S ribosomal protein S6e compare
MMJJ_RS01500 -1.4 -4.3 transcriptional regulator compare
MMJJ_RS08480 -1.4 -3.2 hydroxyethylthiazole kinase compare


Specific Phenotypes

For 1 genes in this experiment

For stress sodium bromide in Methanococcus maripaludis JJ

For stress sodium bromide across organisms