Experiment set8S551 for Methanococcus maripaludis JJ

Compare to:

McCas_formate_complete 3-nitroxypropanol 0.00208333333333333 mM

200 most important genes:

  gene name fitness t score description  
MMJJ_RS00070 -4.8 -1.8 CooT family nickel-binding protein compare
MMJJ_RS04875 -4.6 -0.6 tRNA-Lys compare
MMJJ_RS08870 -4.6 -0.6 2-isopropylmalate synthase compare
MMJJ_RS00040 -4.3 -6.7 CO dehydrogenase/acetyl-CoA synthase complex subunit epsilon compare
MMJJ_RS08130 -4.1 -0.6 translation initiation factor IF-2 subunit gamma compare
MMJJ_RS00060 -4.1 -16.1 acetyl-CoA decarbonylase/synthase complex subunit gamma compare
MMJJ_RS00055 -3.9 -7.4 CO dehydrogenase/acetyl-CoA synthase subunit delta compare
MMJJ_RS09295 -3.9 -0.5 hypothetical protein compare
MMJJ_RS08810 -3.9 -0.5 DUF4040 domain-containing protein compare
MMJJ_RS00050 -3.8 -7.6 AAA family ATPase compare
MMJJ_RS02040 -3.7 -0.9 Asp-tRNA(Asn) amidotransferase subunit GatC compare
MMJJ_RS04485 -3.6 -5.5 riboflavin synthase compare
MMJJ_RS00080 -3.6 -13.4 DUF166 domain-containing protein compare
MMJJ_RS04180 -3.6 -1.4 metalloregulator ArsR/SmtB family transcription factor compare
MMJJ_RS05190 -3.5 -4.4 gamma carbonic anhydrase family protein compare
MMJJ_RS00045 -3.5 -12.8 CO dehydrogenase/CO-methylating acetyl-CoA synthase complex subunit beta compare
MMJJ_RS01810 -3.4 -0.8 methyl coenzyme M reductase system, component A2 compare
MMJJ_RS03195 -3.4 -2.8 hypothetical protein compare
MMJJ_RS00035 -3.3 -14.0 CO dehydrogenase/acetyl-CoA synthase complex subunit alpha compare
MMJJ_RS03920 -3.3 -11.9 nickel pincer cofactor biosynthesis protein LarC compare
MMJJ_RS05770 -3.3 -1.0 flagellar protein D compare
MMJJ_RS07975 -3.2 -7.6 ATP-dependent sacrificial sulfur transferase LarE compare
MMJJ_RS04750 -3.2 -8.3 5,10-methenyltetrahydromethanopterin hydrogenase compare
MMJJ_RS01880 -3.2 -1.1 RlmE family RNA methyltransferase compare
MMJJ_RS07955 -3.1 -7.7 ThiF family adenylyltransferase compare
MMJJ_RS00075 -3.1 -8.3 AAA family ATPase compare
MMJJ_RS00935 -3.1 -9.6 nickel pincer cofactor biosynthesis protein LarB compare
MMJJ_RS07505 -3.1 -0.6 DNA-directed RNA polymerase subunit K compare
MMJJ_RS04755 -3.0 -10.2 5,10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdB compare
MMJJ_RS00450 -3.0 -0.8 DUF126 domain-containing protein compare
MMJJ_RS09175 -3.0 -0.6 anthranilate synthase component I compare
MMJJ_RS08500 -3.0 -4.6 L-sulfolactate dehydrogenase compare
MMJJ_RS00065 -3.0 -6.9 4Fe-4S dicluster domain-containing protein compare
MMJJ_RS00580 -2.9 -0.7 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase subunit CofG compare
MMJJ_RS00220 -2.9 -4.4 UPF0058 family protein compare
MMJJ_RS07470 -2.9 -0.8 50S ribosome-binding GTPase compare
MMJJ_RS08010 -2.9 -5.9 phosphoadenosine phosphosulfate reductase family protein compare
MMJJ_RS05575 -2.8 -1.2 2-amino-5-formylamino-6-ribosylaminopyrimidin- 4(3H)-one 5'-monophosphate deformylase compare
MMJJ_RS05155 -2.8 -1.4 5-amino-6-(D-ribitylamino)uracil--L-tyrosine 4-hydroxyphenyl transferase CofH compare
MMJJ_RS08080 -2.8 -6.2 TIGR00300 family protein compare
MMJJ_RS06915 -2.8 -10.8 helix-turn-helix domain-containing protein compare
MMJJ_RS05590 -2.8 -0.7 homoserine dehydrogenase compare
MMJJ_RS02200 -2.8 -1.9 chorismate pyruvate-lyase family protein compare
MMJJ_RS00570 -2.8 -0.6 ribonuclease P compare
MMJJ_RS02665 -2.7 -1.9 methyl-accepting chemotaxis protein compare
MMJJ_RS06875 -2.7 -0.8 hypothetical protein compare
MMJJ_RS04760 -2.7 -10.4 5,10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdC compare
MMJJ_RS06660 -2.7 -6.1 DUF1188 domain-containing protein compare
MMJJ_RS07360 -2.7 -0.9 TIGR00269 family protein compare
MMJJ_RS05360 -2.7 -3.8 nickel-responsive transcriptional regulator NikR compare
MMJJ_RS09375 -2.6 -0.6 hypothetical protein compare
MMJJ_RS03395 -2.6 -2.1 hypothetical protein compare
MMJJ_RS05535 -2.6 -9.7 hypothetical protein compare
MMJJ_RS04730 -2.6 -0.9 tyrosine decarboxylase MfnA compare
MMJJ_RS04970 -2.5 -0.7 DUF655 domain-containing protein compare
MMJJ_RS07970 -2.5 -1.2 O-phospho-L-seryl-tRNA:Cys-tRNA synthase compare
MMJJ_RS06375 -2.5 -1.7 UbiX family flavin prenyltransferase compare
MMJJ_RS08320 -2.5 -1.3 CDP-diacylglycerol--serine O-phosphatidyltransferase compare
MMJJ_RS01100 -2.5 -1.0 helix-turn-helix domain-containing protein compare
MMJJ_RS07410 -2.5 -1.1 methanogenesis marker protein Mmp4/MtxX compare
MMJJ_RS00285 -2.5 -9.5 UPF0254 family protein compare
MMJJ_RS01405 -2.5 -0.7 proline--tRNA ligase compare
MMJJ_RS08625 -2.4 -2.4 magnesium/cobalt transporter CorA compare
MMJJ_RS08620 -2.4 -1.0 DUF373 family protein compare
MMJJ_RS08840 -2.4 -1.2 calcium/sodium antiporter compare
MMJJ_RS03110 -2.4 -1.5 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase compare
MMJJ_RS03810 -2.4 -1.1 AIR synthase-related protein compare
MMJJ_RS07035 -2.4 -0.7 glycosyl transferase compare
MMJJ_RS00210 -2.4 -0.7 DUF530 family protein compare
MMJJ_RS04475 -2.4 -2.0 3,4-dihydroxy-2-butanone-4-phosphate synthase compare
MMJJ_RS07245 -2.3 -1.8 amidohydrolase family protein compare
MMJJ_RS07005 -2.3 -2.8 transcription factor S compare
MMJJ_RS05780 -2.3 -1.2 flagellin compare
MMJJ_RS06910 -2.3 -1.3 energy-converting NiFe hydrogenase A subunit EhaA compare
MMJJ_RS07000 -2.3 -0.6 TrkH family potassium uptake protein compare
MMJJ_RS07190 -2.3 -1.6 RtcB family protein compare
MMJJ_RS04700 -2.3 -3.0 deoxyhypusine synthase compare
MMJJ_RS06930 -2.3 -0.8 type II methionyl aminopeptidase compare
MMJJ_RS08340 -2.3 -2.8 archaeoflavoprotein AfpA compare
MMJJ_RS08585 -2.3 -4.5 M42 family metallopeptidase compare
MMJJ_RS02090 -2.3 -1.6 tyramine--L-glutamate ligase compare
MMJJ_RS08660 -2.2 -0.9 acetylornithine transaminase compare
MMJJ_RS04565 -2.2 -0.8 sirohydrochlorin nickelochelatase compare
MMJJ_RS01820 -2.2 -2.5 MJ1244 family protein compare
MMJJ_RS03115 -2.2 -2.7 sulfopyruvate decarboxylase subunit alpha compare
MMJJ_RS01690 -2.2 -1.5 methanogenesis marker 12 protein compare
MMJJ_RS03245 -2.2 -0.4 UMP kinase compare
MMJJ_RS06110 -2.2 -0.7 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC compare
MMJJ_RS08575 -2.2 -2.1 hypothetical protein compare
MMJJ_RS06600 -2.2 -1.3 DUF555 domain-containing protein compare
MMJJ_RS01865 -2.2 -2.7 peptidyl-tRNA hydrolase Pth2 compare
MMJJ_RS03095 -2.2 -0.7 bifunctional N(6)-L-threonylcarbamoyladenine synthase/serine/threonine protein kinase compare
MMJJ_RS03965 -2.2 -0.5 DNA-directed RNA polymerase subunit L compare
MMJJ_RS03785 -2.1 -0.8 hypothetical protein compare
MMJJ_RS04200 -2.1 -1.2 triphosphoribosyl-dephospho-CoA synthase compare
MMJJ_RS06750 -2.1 -0.6 homoaconitase large subunit compare
MMJJ_RS00355 -2.1 -1.4 ribonuclease P protein component 4 compare
MMJJ_RS03655 -2.1 -3.6 replication factor C large subunit compare
MMJJ_RS06240 -2.1 -0.7 dihydropteroate synthase-like protein compare
MMJJ_RS06635 -2.1 -9.1 4Fe-4S binding protein compare
MMJJ_RS01830 -2.1 -0.9 tRNA(Ile)(2)-agmatinylcytidine synthase compare
MMJJ_RS01815 -2.1 -2.1 DUF134 domain-containing protein compare
MMJJ_RS08935 -2.1 -0.4 TIGR00288 family NYN domain-containing protein compare
MMJJ_RS06000 -2.1 -2.0 cation:proton antiporter subunit C compare
MMJJ_RS06200 -2.1 -0.6 phosphoglycerate dehydrogenase compare
MMJJ_RS02045 -2.0 -0.9 molybdenum cofactor guanylyltransferase compare
MMJJ_RS03270 -2.0 -0.9 ribosome biogenesis/translation initiation ATPase RLI compare
MMJJ_RS06725 -2.0 -8.0 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMJJ_RS05065 -2.0 -2.0 (4-{4-[2-(gamma-L- glutamylamino)ethyl]phenoxymethyl}furan-2-yl)methanamine synthase compare
MMJJ_RS04010 -2.0 -5.0 archaeal proteasome endopeptidase complex subunit alpha compare
MMJJ_RS06695 -2.0 -1.0 amidohydrolase compare
MMJJ_RS02855 -1.9 -5.5 DEAD/DEAH box helicase compare
MMJJ_RS05655 -1.9 -3.6 HisA/HisF family protein compare
MMJJ_RS06835 -1.9 -7.5 4Fe-4S binding protein compare
MMJJ_RS07425 -1.9 -6.7 MBL fold metallo-hydrolase compare
MMJJ_RS03065 -1.9 -7.8 CBS domain-containing protein compare
MMJJ_RS00560 -1.9 -0.8 homoisocitrate dehydrogenase compare
MMJJ_RS06855 -1.9 -0.4 DUF2104 domain-containing protein compare
MMJJ_RS04790 -1.9 -0.8 biotin--[acetyl-CoA-carboxylase] ligase compare
MMJJ_RS06805 -1.9 -1.0 monovalent cation/H+ antiporter subunit E compare
MMJJ_RS08020 -1.9 -4.7 nucleotidyltransferase domain-containing protein compare
MMJJ_RS00550 -1.9 -4.7 AIR synthase-related protein compare
MMJJ_RS04525 -1.8 -2.4 hypothetical protein compare
MMJJ_RS06380 -1.8 -0.8 signal recognition particle protein Srp54 compare
MMJJ_RS04110 -1.8 -4.0 hypothetical protein compare
MMJJ_RS06940 -1.8 -8.2 metalloregulator ArsR/SmtB family transcription factor compare
MMJJ_RS04655 -1.8 -3.2 FAD-dependent oxidoreductase compare
MMJJ_RS07350 -1.8 -1.1 4Fe-4S binding protein compare
MMJJ_RS08325 -1.8 -0.9 glycosyltransferase family 2 protein compare
MMJJ_RS03585 -1.8 -0.3 methanogenesis marker 6 protein compare
MMJJ_RS05935 -1.8 -0.7 Era-like GTP-binding protein compare
MMJJ_RS06860 -1.8 -1.5 hypothetical protein compare
MMJJ_RS03490 -1.8 -0.9 ribonuclease VapC compare
MMJJ_RS06270 -1.8 -4.4 dethiobiotin synthase compare
MMJJ_RS03200 -1.8 -0.5 uroporphyrinogen-III synthase compare
MMJJ_RS01355 -1.8 -0.8 UDP-N-acetyl-D-mannosamine dehydrogenase compare
MMJJ_RS07380 -1.8 -4.5 sulfide-dependent adenosine diphosphate thiazole synthase compare
MMJJ_RS07960 -1.8 -1.5 quinolinate synthase NadA compare
MMJJ_RS01925 -1.7 -4.0 fibrillarin-like rRNA/tRNA 2'-O-methyltransferase compare
MMJJ_RS07715 -1.7 -1.5 UbiD family decarboxylase compare
MMJJ_RS04800 -1.7 -2.4 2-phospho-L-lactate guanylyltransferase compare
MMJJ_RS08430 -1.7 -3.3 small nuclear ribonucleoprotein compare
MMJJ_RS04965 -1.7 -1.9 RNA polymerase Rpb4 family protein compare
MMJJ_RS05170 -1.7 -6.3 Nif3-like dinuclear metal center hexameric protein compare
MMJJ_RS03125 -1.7 -1.3 GMC oxidoreductase compare
MMJJ_RS06390 -1.7 -0.4 NADPH-dependent F420 reductase compare
MMJJ_RS01520 -1.7 -2.5 helix-turn-helix transcriptional regulator compare
MMJJ_RS03150 -1.7 -2.0 2-phospho-L-lactate transferase compare
MMJJ_RS06155 -1.7 -2.3 phosphatidylglycerophosphatase A compare
MMJJ_RS08480 -1.7 -5.1 hydroxyethylthiazole kinase compare
MMJJ_RS07945 -1.7 -0.6 4Fe-4S binding protein compare
MMJJ_RS06565 -1.7 -3.6 segregation/condensation protein A compare
MMJJ_RS04720 -1.7 -0.9 IMP dehydrogenase compare
MMJJ_RS03635 -1.6 -2.1 methionine--tRNA ligase compare
MMJJ_RS08060 -1.6 -5.9 DNA repair and recombination protein RadA compare
MMJJ_RS05810 -1.6 -2.9 precorrin-4 C(11)-methyltransferase compare
MMJJ_RS05445 -1.6 -0.4 2-oxoacid:acceptor oxidoreductase subunit alpha compare
MMJJ_RS05610 -1.6 -1.8 CDP-2,3-bis-(O-geranylgeranyl)-sn-glycerol synthase compare
MMJJ_RS08535 -1.6 -1.3 NOL1/NOP2/sun family putative RNA methylase compare
MMJJ_RS08330 -1.6 -0.6 SufD family Fe-S cluster assembly protein compare
MMJJ_RS00270 -1.6 -0.6 adenosylcobinamide-GDP ribazoletransferase compare
MMJJ_RS07705 -1.6 -0.9 GTP-binding protein EngB compare
MMJJ_RS03190 -1.6 -0.6 phosphopyruvate hydratase compare
MMJJ_RS00645 -1.6 -5.8 adenosylmethionine--8-amino-7-oxononanoate transaminase compare
MMJJ_RS03620 -1.6 -1.1 DUF2097 domain-containing protein compare
MMJJ_RS07345 -1.6 -4.0 homocysteine biosynthesis protein compare
MMJJ_RS03765 -1.6 -3.2 hypothetical protein compare
MMJJ_RS03140 -1.6 -5.1 tRNA-dihydrouridine synthase compare
MMJJ_RS09265 -1.6 -1.5 hypothetical protein compare
MMJJ_RS06760 -1.5 -1.5 Ni-sirohydrochlorin a,c-diamide synthase compare
MMJJ_RS00195 -1.5 -0.7 precorrin-3B C(17)-methyltransferase compare
MMJJ_RS03360 -1.5 -0.7 hypothetical protein compare
MMJJ_RS07950 -1.5 -1.0 4Fe-4S binding protein compare
MMJJ_RS06905 -1.5 -0.8 hypothetical protein compare
MMJJ_RS03760 -1.5 -0.6 hydrogenase maturation nickel metallochaperone HypA compare
MMJJ_RS06665 -1.5 -2.6 DUF3236 domain-containing protein compare
MMJJ_RS05415 -1.5 -0.4 hypothetical protein compare
MMJJ_RS06265 -1.5 -6.6 8-amino-7-oxononanoate synthase compare
MMJJ_RS00125 -1.5 -0.7 KEOPS complex subunit Cgi121 compare
MMJJ_RS06255 -1.5 -2.7 tRNA uridine(34) 5-carboxymethylaminomethyl modification radical SAM/GNAT enzyme Elp3 compare
MMJJ_RS03805 -1.5 -2.0 hypothetical protein compare
MMJJ_RS02035 -1.5 -2.9 4-hydroxy-tetrahydrodipicolinate synthase compare
MMJJ_RS04975 -1.5 -0.4 glycosyltransferase family 4 protein compare
MMJJ_RS07160 -1.5 -8.6 M20 family metallo-hydrolase compare
MMJJ_RS06715 -1.5 -6.7 lactaldehyde dehydrogenase compare
MMJJ_RS08095 -1.5 -1.8 cobyric acid synthase CobQ compare
MMJJ_RS01350 -1.4 -3.1 sodium:proton antiporter compare
MMJJ_RS03080 -1.4 -3.9 carbohydrate kinase family protein compare
MMJJ_RS01360 -1.4 -0.6 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
MMJJ_RS05720 -1.4 -0.7 glutamine--fructose-6-phosphate transaminase (isomerizing) compare
MMJJ_RS07155 -1.4 -5.4 [5-(aminomethyl)furan-3-yl]methyl phosphate kinase compare
MMJJ_RS01500 -1.4 -3.8 transcriptional regulator compare
MMJJ_RS06030 -1.4 -2.2 4Fe-4S binding protein compare
MMJJ_RS05650 -1.4 -0.5 formylmethanofuran dehydrogenase subunit B compare
MMJJ_RS01870 -1.4 -0.4 methanogenesis marker 15 protein compare
MMJJ_RS06260 -1.4 -3.2 6-carboxyhexanoate--CoA ligase compare
MMJJ_RS07980 -1.4 -6.0 biotin synthase BioB compare
MMJJ_RS06825 -1.4 -4.0 4Fe-4S binding protein compare
MMJJ_RS09085 -1.4 -5.4 minichromosome maintenance protein MCM compare
MMJJ_RS08335 -1.4 -0.6 ABC transporter ATP-binding protein compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis JJ in stress experiments

For stress 3-nitroxypropanol across organisms