Experiment set8S541 for Methanococcus maripaludis JJ

Compare to:

McCas_formate_complete Antimycin A 0.01 mM

200 most important genes:

  gene name fitness t score description  
MMJJ_RS08130 -4.2 -0.5 translation initiation factor IF-2 subunit gamma compare
MMJJ_RS08810 -3.9 -0.5 DUF4040 domain-containing protein compare
MMJJ_RS00050 -3.5 -8.1 AAA family ATPase compare
MMJJ_RS00075 -3.4 -9.3 AAA family ATPase compare
MMJJ_RS00055 -3.4 -8.0 CO dehydrogenase/acetyl-CoA synthase subunit delta compare
MMJJ_RS00935 -3.4 -12.7 nickel pincer cofactor biosynthesis protein LarB compare
MMJJ_RS08320 -3.3 -0.9 CDP-diacylglycerol--serine O-phosphatidyltransferase compare
MMJJ_RS07970 -3.2 -1.0 O-phospho-L-seryl-tRNA:Cys-tRNA synthase compare
MMJJ_RS00040 -3.2 -6.5 CO dehydrogenase/acetyl-CoA synthase complex subunit epsilon compare
MMJJ_RS07505 -3.1 -0.5 DNA-directed RNA polymerase subunit K compare
MMJJ_RS00060 -3.1 -16.4 acetyl-CoA decarbonylase/synthase complex subunit gamma compare
MMJJ_RS00450 -3.1 -0.7 DUF126 domain-containing protein compare
MMJJ_RS09095 -3.1 -7.1 MMPL family transporter compare
MMJJ_RS05535 -3.1 -10.1 hypothetical protein compare
MMJJ_RS06665 -2.9 -4.6 DUF3236 domain-containing protein compare
MMJJ_RS00080 -2.9 -12.7 DUF166 domain-containing protein compare
MMJJ_RS07470 -2.9 -0.7 50S ribosome-binding GTPase compare
MMJJ_RS00045 -2.9 -13.3 CO dehydrogenase/CO-methylating acetyl-CoA synthase complex subunit beta compare
MMJJ_RS04720 -2.9 -0.8 IMP dehydrogenase compare
MMJJ_RS00035 -2.9 -16.1 CO dehydrogenase/acetyl-CoA synthase complex subunit alpha compare
MMJJ_RS00070 -2.8 -1.8 CooT family nickel-binding protein compare
MMJJ_RS01810 -2.8 -0.8 methyl coenzyme M reductase system, component A2 compare
MMJJ_RS08575 -2.8 -2.1 hypothetical protein compare
MMJJ_RS05380 -2.7 -0.5 hypothetical protein compare
MMJJ_RS07975 -2.7 -7.1 ATP-dependent sacrificial sulfur transferase LarE compare
MMJJ_RS03920 -2.7 -14.4 nickel pincer cofactor biosynthesis protein LarC compare
MMJJ_RS04750 -2.7 -7.8 5,10-methenyltetrahydromethanopterin hydrogenase compare
MMJJ_RS07360 -2.7 -0.8 TIGR00269 family protein compare
MMJJ_RS06600 -2.7 -1.0 DUF555 domain-containing protein compare
MMJJ_RS05575 -2.7 -1.5 2-amino-5-formylamino-6-ribosylaminopyrimidin- 4(3H)-one 5'-monophosphate deformylase compare
MMJJ_RS09175 -2.7 -0.6 anthranilate synthase component I compare
MMJJ_RS04875 -2.7 -0.6 tRNA-Lys compare
MMJJ_RS06375 -2.6 -1.6 UbiX family flavin prenyltransferase compare
MMJJ_RS05190 -2.6 -4.5 gamma carbonic anhydrase family protein compare
MMJJ_RS04150 -2.6 -1.0 DUF5379 domain-containing protein compare
MMJJ_RS01530 -2.6 -1.7 YwbE family protein compare
MMJJ_RS05590 -2.6 -0.9 homoserine dehydrogenase compare
MMJJ_RS02200 -2.6 -4.3 chorismate pyruvate-lyase family protein compare
MMJJ_RS08500 -2.6 -4.4 L-sulfolactate dehydrogenase compare
MMJJ_RS04970 -2.6 -0.6 DUF655 domain-containing protein compare
MMJJ_RS05360 -2.6 -4.4 nickel-responsive transcriptional regulator NikR compare
MMJJ_RS04755 -2.6 -9.0 5,10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdB compare
MMJJ_RS09265 -2.5 -1.3 hypothetical protein compare
MMJJ_RS03490 -2.5 -0.8 ribonuclease VapC compare
MMJJ_RS07950 -2.5 -0.8 4Fe-4S binding protein compare
MMJJ_RS04760 -2.5 -13.3 5,10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdC compare
MMJJ_RS04485 -2.5 -5.7 riboflavin synthase compare
MMJJ_RS07960 -2.5 -1.1 quinolinate synthase NadA compare
MMJJ_RS03115 -2.5 -3.2 sulfopyruvate decarboxylase subunit alpha compare
MMJJ_RS01865 -2.5 -3.3 peptidyl-tRNA hydrolase Pth2 compare
MMJJ_RS07955 -2.5 -6.8 ThiF family adenylyltransferase compare
MMJJ_RS06915 -2.5 -10.7 helix-turn-helix domain-containing protein compare
MMJJ_RS00065 -2.4 -6.3 4Fe-4S dicluster domain-containing protein compare
MMJJ_RS05135 -2.4 -0.6 50S ribosomal protein L18Ae compare
MMJJ_RS07035 -2.4 -0.6 glycosyl transferase compare
MMJJ_RS01880 -2.4 -1.3 RlmE family RNA methyltransferase compare
MMJJ_RS08490 -2.3 -2.2 rubrerythrin family protein compare
MMJJ_RS04475 -2.3 -1.6 3,4-dihydroxy-2-butanone-4-phosphate synthase compare
MMJJ_RS04595 -2.3 -2.3 hypothetical protein compare
MMJJ_RS08135 -2.3 -3.5 30S ribosomal protein S6e compare
MMJJ_RS07245 -2.3 -1.6 amidohydrolase family protein compare
MMJJ_RS08870 -2.3 -0.6 2-isopropylmalate synthase compare
MMJJ_RS04730 -2.3 -1.0 tyrosine decarboxylase MfnA compare
MMJJ_RS05935 -2.3 -0.6 Era-like GTP-binding protein compare
MMJJ_RS00525 -2.3 -1.3 Dabb family protein compare
MMJJ_RS06860 -2.3 -1.1 hypothetical protein compare
MMJJ_RS01350 -2.2 -4.0 sodium:proton antiporter compare
MMJJ_RS08080 -2.2 -7.0 TIGR00300 family protein compare
MMJJ_RS00430 -2.2 -1.2 ribonuclease Z compare
MMJJ_RS09130 -2.2 -0.5 NFYB/HAP3 family transcription factor subunit compare
MMJJ_RS02090 -2.2 -1.7 tyramine--L-glutamate ligase compare
MMJJ_RS05065 -2.2 -1.9 (4-{4-[2-(gamma-L- glutamylamino)ethyl]phenoxymethyl}furan-2-yl)methanamine synthase compare
MMJJ_RS03095 -2.2 -0.6 bifunctional N(6)-L-threonylcarbamoyladenine synthase/serine/threonine protein kinase compare
MMJJ_RS00285 -2.2 -8.6 UPF0254 family protein compare
MMJJ_RS06270 -2.2 -4.8 dethiobiotin synthase compare
MMJJ_RS06660 -2.1 -5.5 DUF1188 domain-containing protein compare
MMJJ_RS02035 -2.1 -3.7 4-hydroxy-tetrahydrodipicolinate synthase compare
MMJJ_RS08010 -2.1 -5.1 phosphoadenosine phosphosulfate reductase family protein compare
MMJJ_RS04965 -2.1 -1.9 RNA polymerase Rpb4 family protein compare
MMJJ_RS08190 -2.1 -2.3 hypothetical protein compare
MMJJ_RS05195 -2.1 -3.3 hypothetical protein compare
MMJJ_RS06885 -2.1 -0.8 EhaF family protein compare
MMJJ_RS03185 -2.1 -0.9 alanine--tRNA ligase compare
MMJJ_RS08335 -2.1 -0.5 ABC transporter ATP-binding protein compare
MMJJ_RS06705 -2.1 -1.7 bifunctional NADP phosphatase/NAD kinase compare
MMJJ_RS09085 -2.1 -8.9 minichromosome maintenance protein MCM compare
MMJJ_RS04565 -2.0 -0.9 sirohydrochlorin nickelochelatase compare
MMJJ_RS02040 -2.0 -0.8 Asp-tRNA(Asn) amidotransferase subunit GatC compare
MMJJ_RS05770 -2.0 -1.1 flagellar protein D compare
MMJJ_RS08325 -2.0 -0.7 glycosyltransferase family 2 protein compare
MMJJ_RS06875 -2.0 -0.9 hypothetical protein compare
MMJJ_RS06930 -2.0 -0.8 type II methionyl aminopeptidase compare
MMJJ_RS04545 -2.0 -2.1 PadR family transcriptional regulator compare
MMJJ_RS03965 -2.0 -0.6 DNA-directed RNA polymerase subunit L compare
MMJJ_RS08625 -2.0 -3.1 magnesium/cobalt transporter CorA compare
MMJJ_RS06725 -2.0 -8.3 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMJJ_RS05375 -2.0 -11.6 radical SAM protein compare
MMJJ_RS06695 -2.0 -0.9 amidohydrolase compare
MMJJ_RS01360 -1.9 -0.6 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
MMJJ_RS05420 -1.9 -1.1 DNA-directed DNA polymerase II small subunit compare
MMJJ_RS00550 -1.9 -5.6 AIR synthase-related protein compare
MMJJ_RS06835 -1.9 -8.7 4Fe-4S binding protein compare
MMJJ_RS06225 -1.9 -0.7 adenosylmethionine decarboxylase compare
MMJJ_RS08535 -1.9 -1.3 NOL1/NOP2/sun family putative RNA methylase compare
MMJJ_RS03245 -1.9 -0.4 UMP kinase compare
MMJJ_RS06910 -1.9 -1.2 energy-converting NiFe hydrogenase A subunit EhaA compare
MMJJ_RS03765 -1.9 -4.2 hypothetical protein compare
MMJJ_RS07980 -1.9 -8.4 biotin synthase BioB compare
MMJJ_RS05720 -1.9 -0.6 glutamine--fructose-6-phosphate transaminase (isomerizing) compare
MMJJ_RS00580 -1.9 -0.5 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase subunit CofG compare
MMJJ_RS05170 -1.9 -7.2 Nif3-like dinuclear metal center hexameric protein compare
MMJJ_RS06855 -1.8 -0.4 DUF2104 domain-containing protein compare
MMJJ_RS02855 -1.8 -5.6 DEAD/DEAH box helicase compare
MMJJ_RS06805 -1.8 -1.1 monovalent cation/H+ antiporter subunit E compare
MMJJ_RS03110 -1.8 -1.6 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase compare
MMJJ_RS06495 -1.8 -2.1 hypothetical protein compare
MMJJ_RS03930 -1.8 -8.1 hypothetical protein compare
MMJJ_RS01830 -1.8 -1.2 tRNA(Ile)(2)-agmatinylcytidine synthase compare
MMJJ_RS00645 -1.8 -7.2 adenosylmethionine--8-amino-7-oxononanoate transaminase compare
MMJJ_RS03810 -1.8 -1.3 AIR synthase-related protein compare
MMJJ_RS04800 -1.8 -2.3 2-phospho-L-lactate guanylyltransferase compare
MMJJ_RS03200 -1.8 -0.5 uroporphyrinogen-III synthase compare
MMJJ_RS03585 -1.8 -0.3 methanogenesis marker 6 protein compare
MMJJ_RS03360 -1.8 -0.7 hypothetical protein compare
MMJJ_RS04790 -1.7 -0.9 biotin--[acetyl-CoA-carboxylase] ligase compare
MMJJ_RS03785 -1.7 -0.8 hypothetical protein compare
MMJJ_RS03655 -1.7 -2.5 replication factor C large subunit compare
MMJJ_RS04980 -1.7 -2.1 bifunctional precorrin-2 dehydrogenase/sirohydrochlorin ferrochelatase compare
MMJJ_RS05560 -1.7 -2.6 30S ribosomal protein S27e compare
MMJJ_RS01285 -1.7 -2.7 CopG family ribbon-helix-helix protein compare
MMJJ_RS03230 -1.7 -1.6 NAD(P)/FAD-dependent oxidoreductase compare
MMJJ_RS04700 -1.7 -2.9 deoxyhypusine synthase compare
MMJJ_RS07160 -1.7 -9.5 M20 family metallo-hydrolase compare
MMJJ_RS07155 -1.7 -5.4 [5-(aminomethyl)furan-3-yl]methyl phosphate kinase compare
MMJJ_RS04685 -1.7 -3.3 carbamoyltransferase HypF compare
MMJJ_RS07415 -1.6 -1.1 polyprenyl diphosphate synthase compare
MMJJ_RS06175 -1.6 -0.4 DUF1743 domain-containing protein compare
MMJJ_RS08400 -1.6 -2.2 CoB--CoM heterodisulfide reductase subunit C compare
MMJJ_RS06340 -1.6 -1.3 coenzyme-B sulfoethylthiotransferase subunit alpha compare
MMJJ_RS08330 -1.6 -0.6 SufD family Fe-S cluster assembly protein compare
MMJJ_RS05445 -1.6 -0.4 2-oxoacid:acceptor oxidoreductase subunit alpha compare
MMJJ_RS08230 -1.6 -1.3 ribose-5-phosphate isomerase RpiA compare
MMJJ_RS06820 -1.6 -2.8 CBS domain-containing protein compare
MMJJ_RS07705 -1.6 -0.8 GTP-binding protein EngB compare
MMJJ_RS03080 -1.6 -6.0 carbohydrate kinase family protein compare
MMJJ_RS08020 -1.6 -4.1 nucleotidyltransferase domain-containing protein compare
MMJJ_RS03190 -1.6 -0.5 phosphopyruvate hydratase compare
MMJJ_RS08850 -1.6 -0.5 succinate dehydrogenase/fumarate reductase iron-sulfur subunit compare
MMJJ_RS08035 -1.6 -3.8 cobalt-precorrin-7 (C(5))-methyltransferase compare
MMJJ_RS09055 -1.6 -5.0 NFACT family protein compare
MMJJ_RS01405 -1.6 -0.6 proline--tRNA ligase compare
MMJJ_RS00475 -1.6 -0.5 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase compare
MMJJ_RS06260 -1.5 -3.0 6-carboxyhexanoate--CoA ligase compare
MMJJ_RS00125 -1.5 -0.7 KEOPS complex subunit Cgi121 compare
MMJJ_RS01690 -1.5 -1.3 methanogenesis marker 12 protein compare
MMJJ_RS06635 -1.5 -6.9 4Fe-4S binding protein compare
MMJJ_RS00360 -1.5 -0.7 adenosylhomocysteinase compare
MMJJ_RS05415 -1.5 -0.4 hypothetical protein compare
MMJJ_RS00600 -1.5 -0.8 hydroxymethylbilane synthase compare
MMJJ_RS08025 -1.5 -2.3 hypothetical protein compare
MMJJ_RS01410 -1.5 -3.4 archaeal proteasome endopeptidase complex subunit beta compare
MMJJ_RS03760 -1.5 -0.5 hydrogenase maturation nickel metallochaperone HypA compare
MMJJ_RS05610 -1.5 -1.8 CDP-2,3-bis-(O-geranylgeranyl)-sn-glycerol synthase compare
MMJJ_RS04615 -1.5 -1.5 methanogenesis marker 3 protein compare
MMJJ_RS07590 -1.5 -5.3 flap endonuclease-1 compare
MMJJ_RS09135 -1.5 -3.5 archaeosine biosynthesis radical SAM protein RaSEA compare
MMJJ_RS06010 -1.5 -2.2 hypothetical protein compare
MMJJ_RS06380 -1.5 -1.1 signal recognition particle protein Srp54 compare
MMJJ_RS09375 -1.5 -0.5 hypothetical protein compare
MMJJ_RS04995 -1.5 -2.1 Tfx family DNA-binding protein compare
MMJJ_RS00270 -1.5 -0.7 adenosylcobinamide-GDP ribazoletransferase compare
MMJJ_RS01820 -1.4 -2.4 MJ1244 family protein compare
MMJJ_RS07915 -1.4 -4.1 CBS domain-containing protein compare
MMJJ_RS03310 -1.4 -1.1 hypothetical protein compare
MMJJ_RS08385 -1.4 -3.1 class II SORL domain-containing protein compare
MMJJ_RS02045 -1.4 -0.9 molybdenum cofactor guanylyltransferase compare
MMJJ_RS06265 -1.4 -6.4 8-amino-7-oxononanoate synthase compare
MMJJ_RS08480 -1.4 -4.4 hydroxyethylthiazole kinase compare
MMJJ_RS01010 -1.4 -10.9 right-handed parallel beta-helix repeat-containing protein compare
MMJJ_RS08585 -1.4 -3.2 M42 family metallopeptidase compare
MMJJ_RS00570 -1.4 -0.5 ribonuclease P compare
MMJJ_RS09120 -1.4 -0.5 aspartate kinase compare
MMJJ_RS01870 -1.4 -0.4 methanogenesis marker 15 protein compare
MMJJ_RS05040 -1.4 -4.5 7-carboxy-7-deazaguanine synthase QueE compare
MMJJ_RS03150 -1.4 -1.7 2-phospho-L-lactate transferase compare
MMJJ_RS06155 -1.4 -1.9 phosphatidylglycerophosphatase A compare
MMJJ_RS07190 -1.4 -1.4 RtcB family protein compare
MMJJ_RS03805 -1.4 -1.5 hypothetical protein compare
MMJJ_RS00205 -1.4 -1.7 adenosylcobinamide-phosphate synthase CbiB compare
MMJJ_RS08935 -1.4 -0.3 TIGR00288 family NYN domain-containing protein compare
MMJJ_RS03295 -1.4 -5.7 PHP domain-containing protein compare
MMJJ_RS03225 -1.4 -0.9 4Fe-4S binding protein compare
MMJJ_RS06255 -1.4 -2.6 tRNA uridine(34) 5-carboxymethylaminomethyl modification radical SAM/GNAT enzyme Elp3 compare
MMJJ_RS07000 -1.3 -0.6 TrkH family potassium uptake protein compare
MMJJ_RS08060 -1.3 -4.4 DNA repair and recombination protein RadA compare
MMJJ_RS04865 -1.3 -6.3 4Fe-4S binding protein compare
MMJJ_RS01355 -1.3 -1.0 UDP-N-acetyl-D-mannosamine dehydrogenase compare
MMJJ_RS06825 -1.3 -5.0 4Fe-4S binding protein compare
MMJJ_RS04200 -1.3 -1.8 triphosphoribosyl-dephospho-CoA synthase compare
MMJJ_RS05070 -1.3 -0.4 DNA primase catalytic subunit PriS compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis JJ in stress experiments

For stress Antimycin A across organisms