Experiment set8S539 for Methanococcus maripaludis JJ

Compare to:

McCas_formate_complete sodium nitrite 0.416666666666667 mM

200 most important genes:

  gene name fitness t score description  
MMJJ_RS04875 -4.7 -0.6 tRNA-Lys compare
MMJJ_RS08130 -4.2 -0.5 translation initiation factor IF-2 subunit gamma compare
MMJJ_RS00040 -4.1 -6.6 CO dehydrogenase/acetyl-CoA synthase complex subunit epsilon compare
MMJJ_RS00060 -4.0 -17.8 acetyl-CoA decarbonylase/synthase complex subunit gamma compare
MMJJ_RS00050 -4.0 -8.3 AAA family ATPase compare
MMJJ_RS00080 -3.9 -13.2 DUF166 domain-containing protein compare
MMJJ_RS05065 -3.8 -1.4 (4-{4-[2-(gamma-L- glutamylamino)ethyl]phenoxymethyl}furan-2-yl)methanamine synthase compare
MMJJ_RS00935 -3.8 -12.0 nickel pincer cofactor biosynthesis protein LarB compare
MMJJ_RS02040 -3.7 -0.8 Asp-tRNA(Asn) amidotransferase subunit GatC compare
MMJJ_RS00065 -3.7 -10.4 4Fe-4S dicluster domain-containing protein compare
MMJJ_RS00055 -3.7 -8.8 CO dehydrogenase/acetyl-CoA synthase subunit delta compare
MMJJ_RS04595 -3.6 -2.6 hypothetical protein compare
MMJJ_RS00045 -3.6 -13.1 CO dehydrogenase/CO-methylating acetyl-CoA synthase complex subunit beta compare
MMJJ_RS06915 -3.5 -9.8 helix-turn-helix domain-containing protein compare
MMJJ_RS07955 -3.5 -7.8 ThiF family adenylyltransferase compare
MMJJ_RS03185 -3.4 -0.6 alanine--tRNA ligase compare
MMJJ_RS00075 -3.4 -10.6 AAA family ATPase compare
MMJJ_RS04485 -3.4 -5.8 riboflavin synthase compare
MMJJ_RS04475 -3.4 -1.3 3,4-dihydroxy-2-butanone-4-phosphate synthase compare
MMJJ_RS07975 -3.3 -8.0 ATP-dependent sacrificial sulfur transferase LarE compare
MMJJ_RS01880 -3.3 -1.1 RlmE family RNA methyltransferase compare
MMJJ_RS05190 -3.2 -4.8 gamma carbonic anhydrase family protein compare
MMJJ_RS03920 -3.2 -12.2 nickel pincer cofactor biosynthesis protein LarC compare
MMJJ_RS08470 -3.2 -1.8 ferredoxin family protein compare
MMJJ_RS07970 -3.2 -1.0 O-phospho-L-seryl-tRNA:Cys-tRNA synthase compare
MMJJ_RS00035 -3.2 -11.4 CO dehydrogenase/acetyl-CoA synthase complex subunit alpha compare
MMJJ_RS05535 -3.1 -9.0 hypothetical protein compare
MMJJ_RS00285 -3.1 -14.4 UPF0254 family protein compare
MMJJ_RS00450 -3.1 -0.8 DUF126 domain-containing protein compare
MMJJ_RS07040 -3.1 -0.6 preprotein translocase subunit SecY compare
MMJJ_RS01405 -3.0 -0.6 proline--tRNA ligase compare
MMJJ_RS07505 -3.0 -0.5 DNA-directed RNA polymerase subunit K compare
MMJJ_RS04760 -3.0 -15.5 5,10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdC compare
MMJJ_RS00430 -3.0 -0.9 ribonuclease Z compare
MMJJ_RS03270 -3.0 -0.8 ribosome biogenesis/translation initiation ATPase RLI compare
MMJJ_RS05360 -3.0 -4.4 nickel-responsive transcriptional regulator NikR compare
MMJJ_RS08500 -2.9 -4.1 L-sulfolactate dehydrogenase compare
MMJJ_RS03810 -2.9 -0.9 AIR synthase-related protein compare
MMJJ_RS08035 -2.9 -4.7 cobalt-precorrin-7 (C(5))-methyltransferase compare
MMJJ_RS03360 -2.9 -0.7 hypothetical protein compare
MMJJ_RS01865 -2.9 -3.6 peptidyl-tRNA hydrolase Pth2 compare
MMJJ_RS01765 -2.9 -6.7 winged helix-turn-helix domain-containing protein compare
MMJJ_RS05770 -2.8 -1.2 flagellar protein D compare
MMJJ_RS05575 -2.8 -1.2 2-amino-5-formylamino-6-ribosylaminopyrimidin- 4(3H)-one 5'-monophosphate deformylase compare
MMJJ_RS00570 -2.8 -0.6 ribonuclease P compare
MMJJ_RS03115 -2.8 -3.0 sulfopyruvate decarboxylase subunit alpha compare
MMJJ_RS03170 -2.8 -5.9 DUF5612 domain-containing protein compare
MMJJ_RS01810 -2.8 -0.8 methyl coenzyme M reductase system, component A2 compare
MMJJ_RS03110 -2.8 -1.2 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase compare
MMJJ_RS09375 -2.8 -0.6 hypothetical protein compare
MMJJ_RS08080 -2.8 -6.8 TIGR00300 family protein compare
MMJJ_RS08340 -2.7 -1.5 archaeoflavoprotein AfpA compare
MMJJ_RS05380 -2.7 -0.5 hypothetical protein compare
MMJJ_RS03240 -2.7 -1.4 histone family protein compare
MMJJ_RS06875 -2.7 -0.8 hypothetical protein compare
MMJJ_RS08870 -2.7 -0.7 2-isopropylmalate synthase compare
MMJJ_RS07360 -2.7 -0.8 TIGR00269 family protein compare
MMJJ_RS05155 -2.6 -2.1 5-amino-6-(D-ribitylamino)uracil--L-tyrosine 4-hydroxyphenyl transferase CofH compare
MMJJ_RS04970 -2.6 -0.7 DUF655 domain-containing protein compare
MMJJ_RS04755 -2.6 -7.5 5,10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdB compare
MMJJ_RS04730 -2.6 -0.9 tyrosine decarboxylase MfnA compare
MMJJ_RS02035 -2.6 -3.8 4-hydroxy-tetrahydrodipicolinate synthase compare
MMJJ_RS03490 -2.6 -0.9 ribonuclease VapC compare
MMJJ_RS07005 -2.6 -3.0 transcription factor S compare
MMJJ_RS07950 -2.6 -0.9 4Fe-4S binding protein compare
MMJJ_RS00355 -2.5 -1.2 ribonuclease P protein component 4 compare
MMJJ_RS00210 -2.5 -0.7 DUF530 family protein compare
MMJJ_RS02200 -2.5 -4.4 chorismate pyruvate-lyase family protein compare
MMJJ_RS08585 -2.5 -5.9 M42 family metallopeptidase compare
MMJJ_RS05765 -2.4 -0.4 flagellar protein E compare
MMJJ_RS06660 -2.4 -6.3 DUF1188 domain-containing protein compare
MMJJ_RS06910 -2.4 -1.1 energy-converting NiFe hydrogenase A subunit EhaA compare
MMJJ_RS06820 -2.4 -3.0 CBS domain-containing protein compare
MMJJ_RS04010 -2.4 -6.5 archaeal proteasome endopeptidase complex subunit alpha compare
MMJJ_RS00385 -2.4 -8.4 TIGR00454 family protein compare
MMJJ_RS03655 -2.4 -2.7 replication factor C large subunit compare
MMJJ_RS08625 -2.4 -2.7 magnesium/cobalt transporter CorA compare
MMJJ_RS00580 -2.4 -0.7 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase subunit CofG compare
MMJJ_RS08320 -2.3 -1.1 CDP-diacylglycerol--serine O-phosphatidyltransferase compare
MMJJ_RS00220 -2.3 -4.4 UPF0058 family protein compare
MMJJ_RS07000 -2.3 -0.6 TrkH family potassium uptake protein compare
MMJJ_RS00550 -2.3 -8.5 AIR synthase-related protein compare
MMJJ_RS06665 -2.3 -3.3 DUF3236 domain-containing protein compare
MMJJ_RS07960 -2.3 -1.1 quinolinate synthase NadA compare
MMJJ_RS08840 -2.3 -1.8 calcium/sodium antiporter compare
MMJJ_RS04980 -2.3 -1.5 bifunctional precorrin-2 dehydrogenase/sirohydrochlorin ferrochelatase compare
MMJJ_RS05935 -2.3 -0.7 Era-like GTP-binding protein compare
MMJJ_RS07190 -2.3 -1.5 RtcB family protein compare
MMJJ_RS06885 -2.3 -0.7 EhaF family protein compare
MMJJ_RS06695 -2.3 -0.8 amidohydrolase compare
MMJJ_RS06860 -2.3 -1.1 hypothetical protein compare
MMJJ_RS04750 -2.3 -6.5 5,10-methenyltetrahydromethanopterin hydrogenase compare
MMJJ_RS03230 -2.2 -2.0 NAD(P)/FAD-dependent oxidoreductase compare
MMJJ_RS06155 -2.2 -2.1 phosphatidylglycerophosphatase A compare
MMJJ_RS00030 -2.2 -8.2 thymidylate synthase compare
MMJJ_RS08335 -2.2 -0.6 ABC transporter ATP-binding protein compare
MMJJ_RS08410 -2.2 -2.0 CBS domain-containing protein compare
MMJJ_RS04700 -2.2 -2.6 deoxyhypusine synthase compare
MMJJ_RS02090 -2.2 -2.0 tyramine--L-glutamate ligase compare
MMJJ_RS06600 -2.2 -1.2 DUF555 domain-containing protein compare
MMJJ_RS08575 -2.2 -2.1 hypothetical protein compare
MMJJ_RS01690 -2.1 -1.4 methanogenesis marker 12 protein compare
MMJJ_RS08010 -2.1 -3.9 phosphoadenosine phosphosulfate reductase family protein compare
MMJJ_RS09175 -2.1 -0.7 anthranilate synthase component I compare
MMJJ_RS07410 -2.1 -1.2 methanogenesis marker protein Mmp4/MtxX compare
MMJJ_RS04800 -2.1 -2.0 2-phospho-L-lactate guanylyltransferase compare
MMJJ_RS06705 -2.1 -1.8 bifunctional NADP phosphatase/NAD kinase compare
MMJJ_RS03125 -2.1 -0.9 GMC oxidoreductase compare
MMJJ_RS02045 -2.0 -0.9 molybdenum cofactor guanylyltransferase compare
MMJJ_RS03310 -2.0 -0.8 hypothetical protein compare
MMJJ_RS08020 -2.0 -4.7 nucleotidyltransferase domain-containing protein compare
MMJJ_RS06725 -2.0 -8.7 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMJJ_RS01360 -2.0 -0.6 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
MMJJ_RS08155 -2.0 -0.8 cobalt-precorrin-5B (C(1))-methyltransferase CbiD compare
MMJJ_RS08810 -2.0 -0.5 DUF4040 domain-containing protein compare
MMJJ_RS06930 -2.0 -0.9 type II methionyl aminopeptidase compare
MMJJ_RS03245 -2.0 -0.5 UMP kinase compare
MMJJ_RS05610 -2.0 -1.6 CDP-2,3-bis-(O-geranylgeranyl)-sn-glycerol synthase compare
MMJJ_RS05375 -2.0 -9.1 radical SAM protein compare
MMJJ_RS03785 -1.9 -0.9 hypothetical protein compare
MMJJ_RS08095 -1.9 -1.2 cobyric acid synthase CobQ compare
MMJJ_RS06835 -1.9 -8.4 4Fe-4S binding protein compare
MMJJ_RS04520 -1.9 -1.4 coenzyme F430 synthase compare
MMJJ_RS05720 -1.9 -0.6 glutamine--fructose-6-phosphate transaminase (isomerizing) compare
MMJJ_RS07170 -1.9 -1.5 pyridoxal phosphate-dependent aminotransferase compare
MMJJ_RS07425 -1.9 -7.1 MBL fold metallo-hydrolase compare
MMJJ_RS06635 -1.9 -9.2 4Fe-4S binding protein compare
MMJJ_RS05655 -1.9 -4.6 HisA/HisF family protein compare
MMJJ_RS04655 -1.9 -3.5 FAD-dependent oxidoreductase compare
MMJJ_RS05450 -1.8 -7.8 TIGR03576 family pyridoxal phosphate-dependent enzyme compare
MMJJ_RS03200 -1.8 -0.5 uroporphyrinogen-III synthase compare
MMJJ_RS08430 -1.8 -3.2 small nuclear ribonucleoprotein compare
MMJJ_RS04200 -1.8 -1.6 triphosphoribosyl-dephospho-CoA synthase compare
MMJJ_RS03095 -1.8 -0.8 bifunctional N(6)-L-threonylcarbamoyladenine synthase/serine/threonine protein kinase compare
MMJJ_RS04685 -1.8 -3.6 carbamoyltransferase HypF compare
MMJJ_RS00125 -1.8 -0.6 KEOPS complex subunit Cgi121 compare
MMJJ_RS08480 -1.8 -4.6 hydroxyethylthiazole kinase compare
MMJJ_RS03965 -1.8 -0.5 DNA-directed RNA polymerase subunit L compare
MMJJ_RS04565 -1.8 -1.2 sirohydrochlorin nickelochelatase compare
MMJJ_RS01500 -1.8 -5.0 transcriptional regulator compare
MMJJ_RS09120 -1.8 -0.4 aspartate kinase compare
MMJJ_RS04180 -1.8 -1.1 metalloregulator ArsR/SmtB family transcription factor compare
MMJJ_RS08330 -1.8 -0.6 SufD family Fe-S cluster assembly protein compare
MMJJ_RS06805 -1.8 -1.0 monovalent cation/H+ antiporter subunit E compare
MMJJ_RS08660 -1.8 -1.3 acetylornithine transaminase compare
MMJJ_RS05810 -1.8 -2.9 precorrin-4 C(11)-methyltransferase compare
MMJJ_RS02935 -1.8 -1.3 DNA-directed RNA polymerase subunit E'' compare
MMJJ_RS08825 -1.7 -3.6 hypothetical protein compare
MMJJ_RS09135 -1.7 -5.1 archaeosine biosynthesis radical SAM protein RaSEA compare
MMJJ_RS01350 -1.7 -3.7 sodium:proton antiporter compare
MMJJ_RS04050 -1.7 -0.4 dihydroneopterin aldolase family protein compare
MMJJ_RS06180 -1.7 -0.6 tryptophan--tRNA ligase compare
MMJJ_RS03875 -1.7 -0.7 CBS domain-containing protein compare
MMJJ_RS01830 -1.7 -1.4 tRNA(Ile)(2)-agmatinylcytidine synthase compare
MMJJ_RS01355 -1.7 -1.0 UDP-N-acetyl-D-mannosamine dehydrogenase compare
MMJJ_RS08345 -1.7 -6.8 flavodoxin family protein compare
MMJJ_RS03190 -1.7 -0.6 phosphopyruvate hydratase compare
MMJJ_RS09020 -1.7 -4.4 hypothetical protein compare
MMJJ_RS04790 -1.7 -1.1 biotin--[acetyl-CoA-carboxylase] ligase compare
MMJJ_RS05445 -1.6 -0.4 2-oxoacid:acceptor oxidoreductase subunit alpha compare
MMJJ_RS00560 -1.6 -1.1 homoisocitrate dehydrogenase compare
MMJJ_RS08230 -1.6 -1.4 ribose-5-phosphate isomerase RpiA compare
MMJJ_RS01925 -1.6 -3.6 fibrillarin-like rRNA/tRNA 2'-O-methyltransferase compare
MMJJ_RS02855 -1.6 -5.0 DEAD/DEAH box helicase compare
MMJJ_RS07380 -1.6 -4.8 sulfide-dependent adenosine diphosphate thiazole synthase compare
MMJJ_RS00215 -1.6 -0.7 CCA tRNA nucleotidyltransferase compare
MMJJ_RS07705 -1.6 -0.9 GTP-binding protein EngB compare
MMJJ_RS03620 -1.6 -1.4 DUF2097 domain-containing protein compare
MMJJ_RS06935 -1.6 -6.0 GTP-binding protein compare
MMJJ_RS09085 -1.6 -5.3 minichromosome maintenance protein MCM compare
MMJJ_RS07350 -1.6 -1.1 4Fe-4S binding protein compare
MMJJ_RS06255 -1.6 -2.6 tRNA uridine(34) 5-carboxymethylaminomethyl modification radical SAM/GNAT enzyme Elp3 compare
MMJJ_RS06260 -1.6 -3.5 6-carboxyhexanoate--CoA ligase compare
MMJJ_RS04995 -1.6 -2.4 Tfx family DNA-binding protein compare
MMJJ_RS07155 -1.6 -5.1 [5-(aminomethyl)furan-3-yl]methyl phosphate kinase compare
MMJJ_RS05590 -1.6 -0.9 homoserine dehydrogenase compare
MMJJ_RS06270 -1.5 -4.6 dethiobiotin synthase compare
MMJJ_RS06605 -1.5 -3.1 DUF357 domain-containing protein compare
MMJJ_RS00345 -1.5 -4.9 4-hydroxy-tetrahydrodipicolinate reductase compare
MMJJ_RS04125 -1.5 -4.6 tRNA (guanine(10)-N(2))-dimethyltransferase compare
MMJJ_RS01875 -1.5 -1.8 global nitrogen regulator NrpR compare
MMJJ_RS05260 -1.5 -1.6 ATP-grasp domain-containing protein compare
MMJJ_RS04615 -1.5 -1.0 methanogenesis marker 3 protein compare
MMJJ_RS00195 -1.5 -0.8 precorrin-3B C(17)-methyltransferase compare
MMJJ_RS03580 -1.4 -0.7 TIGR00303 family protein compare
MMJJ_RS00270 -1.4 -0.7 adenosylcobinamide-GDP ribazoletransferase compare
MMJJ_RS08025 -1.4 -1.4 hypothetical protein compare
MMJJ_RS00070 -1.4 -1.2 CooT family nickel-binding protein compare
MMJJ_RS01410 -1.4 -3.0 archaeal proteasome endopeptidase complex subunit beta compare
MMJJ_RS01750 -1.4 -0.4 ferrous iron transport protein A compare
MMJJ_RS06495 -1.4 -1.5 hypothetical protein compare
MMJJ_RS09130 -1.4 -0.6 NFYB/HAP3 family transcription factor subunit compare
MMJJ_RS08490 -1.4 -1.3 rubrerythrin family protein compare
MMJJ_RS06745 -1.4 -4.1 energy-coupling factor ABC transporter permease compare
MMJJ_RS00645 -1.4 -6.1 adenosylmethionine--8-amino-7-oxononanoate transaminase compare
MMJJ_RS03585 -1.4 -0.3 methanogenesis marker 6 protein compare
MMJJ_RS06170 -1.4 -5.6 hypothetical protein compare
MMJJ_RS05170 -1.4 -3.8 Nif3-like dinuclear metal center hexameric protein compare
MMJJ_RS05195 -1.4 -2.3 hypothetical protein compare
MMJJ_RS06165 -1.4 -6.9 archaeosine synthase subunit alpha compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis JJ in stress experiments

For stress Sodium nitrite across organisms