Experiment set8S536 for Methanococcus maripaludis JJ

Compare to:

McCas_formate_complete Sodium selenate 31.25 mM

200 most important genes:

  gene name fitness t score description  
MMJJ_RS01765 -5.2 -3.6 winged helix-turn-helix domain-containing protein compare
MMJJ_RS05065 -4.6 -2.2 (4-{4-[2-(gamma-L- glutamylamino)ethyl]phenoxymethyl}furan-2-yl)methanamine synthase compare
MMJJ_RS02040 -4.5 -1.3 Asp-tRNA(Asn) amidotransferase subunit GatC compare
MMJJ_RS03055 -4.4 -1.7 hypothetical protein compare
MMJJ_RS01810 -4.3 -1.3 methyl coenzyme M reductase system, component A2 compare
MMJJ_RS07505 -4.2 -0.7 DNA-directed RNA polymerase subunit K compare
MMJJ_RS05770 -4.2 -1.6 flagellar protein D compare
MMJJ_RS01880 -4.1 -1.9 RlmE family RNA methyltransferase compare
MMJJ_RS07995 -4.1 -5.5 molybdenum cofactor biosynthesis protein MoaE compare
MMJJ_RS08320 -4.0 -1.6 CDP-diacylglycerol--serine O-phosphatidyltransferase compare
MMJJ_RS03490 -4.0 -1.4 ribonuclease VapC compare
MMJJ_RS07360 -4.0 -1.2 TIGR00269 family protein compare
MMJJ_RS00450 -3.9 -1.3 DUF126 domain-containing protein compare
MMJJ_RS03270 -3.9 -1.3 ribosome biogenesis/translation initiation ATPase RLI compare
MMJJ_RS00580 -3.9 -1.1 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase subunit CofG compare
MMJJ_RS06600 -3.8 -1.5 DUF555 domain-containing protein compare
MMJJ_RS04150 -3.8 -1.4 DUF5379 domain-containing protein compare
MMJJ_RS09035 -3.7 -2.6 OB-fold nucleic acid binding domain-containing protein compare
MMJJ_RS05360 -3.7 -4.0 nickel-responsive transcriptional regulator NikR compare
MMJJ_RS05575 -3.7 -2.0 2-amino-5-formylamino-6-ribosylaminopyrimidin- 4(3H)-one 5'-monophosphate deformylase compare
MMJJ_RS04995 -3.7 -4.4 Tfx family DNA-binding protein compare
MMJJ_RS05590 -3.7 -1.2 homoserine dehydrogenase compare
MMJJ_RS00570 -3.7 -1.1 ribonuclease P compare
MMJJ_RS08080 -3.6 -7.8 TIGR00300 family protein compare
MMJJ_RS07470 -3.6 -1.2 50S ribosome-binding GTPase compare
MMJJ_RS06875 -3.5 -1.3 hypothetical protein compare
MMJJ_RS05780 -3.5 -1.7 flagellin compare
MMJJ_RS00355 -3.5 -1.6 ribonuclease P protein component 4 compare
MMJJ_RS09375 -3.5 -1.0 hypothetical protein compare
MMJJ_RS04730 -3.5 -1.6 tyrosine decarboxylase MfnA compare
MMJJ_RS08625 -3.4 -2.3 magnesium/cobalt transporter CorA compare
MMJJ_RS04770 -3.4 -2.1 formate-dependent phosphoribosylglycinamide formyltransferase compare
MMJJ_RS04700 -3.4 -2.3 deoxyhypusine synthase compare
MMJJ_RS06910 -3.4 -1.4 energy-converting NiFe hydrogenase A subunit EhaA compare
MMJJ_RS04800 -3.3 -2.3 2-phospho-L-lactate guanylyltransferase compare
MMJJ_RS00210 -3.3 -1.3 DUF530 family protein compare
MMJJ_RS09175 -3.3 -0.8 anthranilate synthase component I compare
MMJJ_RS06860 -3.3 -1.6 hypothetical protein compare
MMJJ_RS08535 -3.3 -1.6 NOL1/NOP2/sun family putative RNA methylase compare
MMJJ_RS00600 -3.3 -1.4 hydroxymethylbilane synthase compare
MMJJ_RS02045 -3.3 -1.4 molybdenum cofactor guanylyltransferase compare
MMJJ_RS02090 -3.3 -2.1 tyramine--L-glutamate ligase compare
MMJJ_RS07410 -3.2 -1.8 methanogenesis marker protein Mmp4/MtxX compare
MMJJ_RS07245 -3.2 -2.2 amidohydrolase family protein compare
MMJJ_RS03965 -3.2 -0.9 DNA-directed RNA polymerase subunit L compare
MMJJ_RS08325 -3.2 -1.2 glycosyltransferase family 2 protein compare
MMJJ_RS05935 -3.2 -1.2 Era-like GTP-binding protein compare
MMJJ_RS00475 -3.2 -1.1 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase compare
MMJJ_RS03095 -3.2 -1.3 bifunctional N(6)-L-threonylcarbamoyladenine synthase/serine/threonine protein kinase compare
MMJJ_RS03785 -3.2 -1.4 hypothetical protein compare
MMJJ_RS08855 -3.2 -3.3 cyclic pyranopterin monophosphate synthase MoaC compare
MMJJ_RS07190 -3.2 -2.0 RtcB family protein compare
MMJJ_RS06725 -3.2 -9.3 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMJJ_RS04565 -3.1 -1.4 sirohydrochlorin nickelochelatase compare
MMJJ_RS01410 -3.1 -5.1 archaeal proteasome endopeptidase complex subunit beta compare
MMJJ_RS08010 -3.1 -5.8 phosphoadenosine phosphosulfate reductase family protein compare
MMJJ_RS08660 -3.1 -1.6 acetylornithine transaminase compare
MMJJ_RS00070 -3.1 -2.1 CooT family nickel-binding protein compare
MMJJ_RS07000 -3.1 -1.1 TrkH family potassium uptake protein compare
MMJJ_RS05280 -3.1 -0.7 hypothetical protein compare
MMJJ_RS06695 -3.1 -1.4 amidohydrolase compare
MMJJ_RS07350 -3.1 -1.5 4Fe-4S binding protein compare
MMJJ_RS05225 -3.1 -0.7 Gar1/Naf1 family protein compare
MMJJ_RS05380 -3.1 -0.7 hypothetical protein compare
MMJJ_RS05610 -3.1 -2.0 CDP-2,3-bis-(O-geranylgeranyl)-sn-glycerol synthase compare
MMJJ_RS09130 -3.0 -1.0 NFYB/HAP3 family transcription factor subunit compare
MMJJ_RS06750 -3.0 -1.1 homoaconitase large subunit compare
MMJJ_RS03125 -3.0 -1.7 GMC oxidoreductase compare
MMJJ_RS05720 -2.8 -1.3 glutamine--fructose-6-phosphate transaminase (isomerizing) compare
MMJJ_RS00055 -2.8 -5.9 CO dehydrogenase/acetyl-CoA synthase subunit delta compare
MMJJ_RS03895 -2.8 -1.3 hydrogenase expression/formation protein HypE compare
MMJJ_RS05765 -2.8 -0.7 flagellar protein E compare
MMJJ_RS06660 -2.7 -4.7 DUF1188 domain-containing protein compare
MMJJ_RS06905 -2.7 -0.9 hypothetical protein compare
MMJJ_RS08155 -2.7 -1.5 cobalt-precorrin-5B (C(1))-methyltransferase CbiD compare
MMJJ_RS03765 -2.7 -4.8 hypothetical protein compare
MMJJ_RS06255 -2.7 -4.0 tRNA uridine(34) 5-carboxymethylaminomethyl modification radical SAM/GNAT enzyme Elp3 compare
MMJJ_RS04050 -2.7 -0.8 dihydroneopterin aldolase family protein compare
MMJJ_RS04655 -2.7 -5.5 FAD-dependent oxidoreductase compare
MMJJ_RS00125 -2.7 -1.2 KEOPS complex subunit Cgi121 compare
MMJJ_RS04750 -2.7 -6.3 5,10-methenyltetrahydromethanopterin hydrogenase compare
MMJJ_RS06180 -2.7 -1.3 tryptophan--tRNA ligase compare
MMJJ_RS06390 -2.6 -0.9 NADPH-dependent F420 reductase compare
MMJJ_RS08500 -2.6 -4.7 L-sulfolactate dehydrogenase compare
MMJJ_RS05260 -2.6 -1.8 ATP-grasp domain-containing protein compare
MMJJ_RS06220 -2.6 -3.9 polyamine aminopropyltransferase compare
MMJJ_RS02200 -2.6 -8.1 chorismate pyruvate-lyase family protein compare
MMJJ_RS05535 -2.6 -8.1 hypothetical protein compare
MMJJ_RS03760 -2.6 -1.3 hydrogenase maturation nickel metallochaperone HypA compare
MMJJ_RS07705 -2.6 -1.3 GTP-binding protein EngB compare
MMJJ_RS03580 -2.6 -1.2 TIGR00303 family protein compare
MMJJ_RS07955 -2.6 -6.0 ThiF family adenylyltransferase compare
MMJJ_RS00270 -2.6 -1.2 adenosylcobinamide-GDP ribazoletransferase compare
MMJJ_RS03065 -2.6 -7.0 CBS domain-containing protein compare
MMJJ_RS05445 -2.5 -0.9 2-oxoacid:acceptor oxidoreductase subunit alpha compare
MMJJ_RS03005 -2.5 -1.4 Ni-sirohydrochlorin a,c-diamide reductive cyclase catalytic subunit compare
MMJJ_RS03995 -2.5 -5.4 PHP domain-containing protein compare
MMJJ_RS01960 -2.5 -5.2 glycosyltransferase family 2 protein compare
MMJJ_RS08850 -2.5 -1.0 succinate dehydrogenase/fumarate reductase iron-sulfur subunit compare
MMJJ_RS08020 -2.5 -6.4 nucleotidyltransferase domain-containing protein compare
MMJJ_RS05415 -2.5 -0.9 hypothetical protein compare
MMJJ_RS08430 -2.5 -4.2 small nuclear ribonucleoprotein compare
MMJJ_RS00050 -2.4 -4.5 AAA family ATPase compare
MMJJ_RS04975 -2.4 -0.9 glycosyltransferase family 4 protein compare
MMJJ_RS01350 -2.4 -5.1 sodium:proton antiporter compare
MMJJ_RS03185 -2.4 -1.5 alanine--tRNA ligase compare
MMJJ_RS05170 -2.4 -6.4 Nif3-like dinuclear metal center hexameric protein compare
MMJJ_RS04010 -2.4 -3.8 archaeal proteasome endopeptidase complex subunit alpha compare
MMJJ_RS05655 -2.4 -7.1 HisA/HisF family protein compare
MMJJ_RS03615 -2.4 -1.1 cobalt-precorrin-8 methylmutase compare
MMJJ_RS03060 -2.4 -1.1 methanogenesis marker 7 protein compare
MMJJ_RS05650 -2.4 -1.1 formylmethanofuran dehydrogenase subunit B compare
MMJJ_RS01415 -2.4 -1.0 beta-CASP ribonuclease aCPSF1 compare
MMJJ_RS08585 -2.4 -5.0 M42 family metallopeptidase compare
MMJJ_RS01870 -2.4 -0.9 methanogenesis marker 15 protein compare
MMJJ_RS09085 -2.4 -8.6 minichromosome maintenance protein MCM compare
MMJJ_RS06375 -2.3 -2.6 UbiX family flavin prenyltransferase compare
MMJJ_RS00425 -2.3 -2.0 hypothetical protein compare
MMJJ_RS01750 -2.3 -1.0 ferrous iron transport protein A compare
MMJJ_RS08000 -2.3 -7.5 HesA/MoeB/ThiF family protein compare
MMJJ_RS04760 -2.3 -8.8 5,10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdC compare
MMJJ_RS07380 -2.3 -5.0 sulfide-dependent adenosine diphosphate thiazole synthase compare
MMJJ_RS01200 -2.3 -1.2 PRC-barrel domain-containing protein compare
MMJJ_RS03230 -2.3 -2.7 NAD(P)/FAD-dependent oxidoreductase compare
MMJJ_RS05070 -2.3 -0.8 DNA primase catalytic subunit PriS compare
MMJJ_RS07970 -2.3 -1.5 O-phospho-L-seryl-tRNA:Cys-tRNA synthase compare
MMJJ_RS07665 -2.3 -10.1 formate dehydrogenase subunit alpha compare
MMJJ_RS03310 -2.2 -2.4 hypothetical protein compare
MMJJ_RS06915 -2.2 -7.9 helix-turn-helix domain-containing protein compare
MMJJ_RS04985 -2.2 -1.2 glutamyl-tRNA reductase compare
MMJJ_RS06250 -2.2 -1.0 nicotinamide-nucleotide adenylyltransferase compare
MMJJ_RS01755 -2.2 -1.0 ferrous iron transport protein B compare
MMJJ_RS08795 -2.2 -1.0 phosphoglucosamine mutase compare
MMJJ_RS00220 -2.2 -3.5 UPF0058 family protein compare
MMJJ_RS08065 -2.1 -1.5 precorrin-6Y C5,15-methyltransferase (decarboxylating) subunit CbiT compare
MMJJ_RS04485 -2.1 -3.8 riboflavin synthase compare
MMJJ_RS07720 -2.1 -0.7 UPF0058 family protein compare
MMJJ_RS05190 -2.1 -2.9 gamma carbonic anhydrase family protein compare
MMJJ_RS06155 -2.1 -3.0 phosphatidylglycerophosphatase A compare
MMJJ_RS01475 -2.1 -0.8 signal recognition particle-docking protein FtsY compare
MMJJ_RS07155 -2.1 -7.2 [5-(aminomethyl)furan-3-yl]methyl phosphate kinase compare
MMJJ_RS04200 -2.1 -3.8 triphosphoribosyl-dephospho-CoA synthase compare
MMJJ_RS02920 -2.1 -0.7 30S ribosomal protein S27ae compare
MMJJ_RS00275 -2.1 -0.8 coenzyme F420-0:L-glutamate ligase compare
MMJJ_RS02190 -2.1 -7.3 molybdopterin biosynthesis protein compare
MMJJ_RS04980 -2.1 -3.4 bifunctional precorrin-2 dehydrogenase/sirohydrochlorin ferrochelatase compare
MMJJ_RS02055 -2.0 -6.0 GTP 3',8-cyclase MoaA compare
MMJJ_RS04755 -2.0 -5.4 5,10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdB compare
MMJJ_RS07655 -2.0 -7.0 hypothetical protein compare
MMJJ_RS04505 -2.0 -4.7 CDC48 family AAA ATPase compare
MMJJ_RS04520 -2.0 -3.1 coenzyme F430 synthase compare
MMJJ_RS00785 -2.0 -1.9 hypothetical protein compare
MMJJ_RS06835 -2.0 -6.3 4Fe-4S binding protein compare
MMJJ_RS06110 -2.0 -1.5 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC compare
MMJJ_RS01600 -2.0 -0.9 radical SAM protein compare
MMJJ_RS06185 -2.0 -4.4 cobalamin biosynthesis protein compare
MMJJ_RS05540 -2.0 -8.6 LysR family transcriptional regulator compare
MMJJ_RS04595 -2.0 -2.6 hypothetical protein compare
MMJJ_RS06150 -2.0 -1.8 DUF483 domain-containing protein compare
MMJJ_RS03815 -2.0 -0.6 nascent polypeptide-associated complex protein compare
MMJJ_RS00065 -2.0 -4.5 4Fe-4S dicluster domain-containing protein compare
MMJJ_RS07950 -2.0 -1.6 4Fe-4S binding protein compare
MMJJ_RS04685 -1.9 -5.2 carbamoyltransferase HypF compare
MMJJ_RS07275 -1.9 -1.0 formate--phosphoribosylaminoimidazolecarboxamide ligase compare
MMJJ_RS05330 -1.9 -0.9 DNA polymerase II large subunit compare
MMJJ_RS09190 -1.9 -0.5 tryptophan synthase subunit beta compare
MMJJ_RS00265 -1.9 -2.9 TIGR02253 family HAD-type hydrolase compare
MMJJ_RS01830 -1.9 -2.3 tRNA(Ile)(2)-agmatinylcytidine synthase compare
MMJJ_RS03150 -1.9 -3.7 2-phospho-L-lactate transferase compare
MMJJ_RS00035 -1.9 -6.8 CO dehydrogenase/acetyl-CoA synthase complex subunit alpha compare
MMJJ_RS08060 -1.9 -4.9 DNA repair and recombination protein RadA compare
MMJJ_RS00285 -1.9 -6.1 UPF0254 family protein compare
MMJJ_RS06510 -1.9 -0.8 LL-diaminopimelate aminotransferase compare
MMJJ_RS08470 -1.8 -2.2 ferredoxin family protein compare
MMJJ_RS07715 -1.8 -2.0 UbiD family decarboxylase compare
MMJJ_RS06485 -1.8 -0.9 phosphoglycerate kinase compare
MMJJ_RS07585 -1.8 -5.0 DHH family phosphoesterase compare
MMJJ_RS00550 -1.8 -4.8 AIR synthase-related protein compare
MMJJ_RS04575 -1.8 -5.0 DUF116 domain-containing protein compare
MMJJ_RS03110 -1.8 -2.1 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase compare
MMJJ_RS04525 -1.8 -2.2 hypothetical protein compare
MMJJ_RS06840 -1.7 -1.0 nickel-dependent hydrogenase large subunit compare
MMJJ_RS07660 -1.7 -3.6 carbonic anhydrase compare
MMJJ_RS03155 -1.7 -5.0 hypothetical protein compare
MMJJ_RS03930 -1.7 -5.6 hypothetical protein compare
MMJJ_RS03875 -1.7 -1.7 CBS domain-containing protein compare
MMJJ_RS06215 -1.7 -2.4 agmatinase compare
MMJJ_RS07165 -1.7 -7.1 chromosome segregation protein SMC compare
MMJJ_RS01355 -1.7 -1.9 UDP-N-acetyl-D-mannosamine dehydrogenase compare
MMJJ_RS03810 -1.6 -2.0 AIR synthase-related protein compare
MMJJ_RS00045 -1.6 -5.2 CO dehydrogenase/CO-methylating acetyl-CoA synthase complex subunit beta compare
MMJJ_RS07945 -1.6 -1.4 4Fe-4S binding protein compare
MMJJ_RS02035 -1.6 -2.4 4-hydroxy-tetrahydrodipicolinate synthase compare
MMJJ_RS08025 -1.6 -2.0 hypothetical protein compare
MMJJ_RS07670 -1.6 -5.9 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C-terminal domain compare
MMJJ_RS05810 -1.6 -3.2 precorrin-4 C(11)-methyltransferase compare
MMJJ_RS08235 -1.6 -1.9 UPF0147 family protein compare
MMJJ_RS04650 -1.6 -2.8 nitrogenase iron protein compare
MMJJ_RS08185 -1.6 -6.5 ABC transporter permease compare
MMJJ_RS04155 -1.5 -3.3 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis JJ in stress experiments

For stress Sodium selenate across organisms