Experiment set8S529 for Methanococcus maripaludis JJ

Compare to:

McCas_formate_complete Anhydrotetracycline hydrochloride 0.05 mM

200 most important genes:

  gene name fitness t score description  
MMJJ_RS04875 -4.1 -0.9 tRNA-Lys compare
MMJJ_RS02040 -3.9 -1.5 Asp-tRNA(Asn) amidotransferase subunit GatC compare
MMJJ_RS00580 -3.8 -1.0 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase subunit CofG compare
MMJJ_RS00570 -3.6 -1.0 ribonuclease P compare
MMJJ_RS07470 -3.6 -1.1 50S ribosome-binding GTPase compare
MMJJ_RS08320 -3.5 -1.7 CDP-diacylglycerol--serine O-phosphatidyltransferase compare
MMJJ_RS04485 -3.5 -7.4 riboflavin synthase compare
MMJJ_RS01810 -3.5 -1.3 methyl coenzyme M reductase system, component A2 compare
MMJJ_RS00355 -3.4 -1.4 ribonuclease P protein component 4 compare
MMJJ_RS03230 -3.4 -2.3 NAD(P)/FAD-dependent oxidoreductase compare
MMJJ_RS06875 -3.4 -1.2 hypothetical protein compare
MMJJ_RS09375 -3.3 -0.9 hypothetical protein compare
MMJJ_RS09175 -3.3 -0.7 anthranilate synthase component I compare
MMJJ_RS04730 -3.3 -1.4 tyrosine decarboxylase MfnA compare
MMJJ_RS04970 -3.3 -1.0 DUF655 domain-containing protein compare
MMJJ_RS05065 -3.3 -2.9 (4-{4-[2-(gamma-L- glutamylamino)ethyl]phenoxymethyl}furan-2-yl)methanamine synthase compare
MMJJ_RS04150 -3.2 -1.6 DUF5379 domain-containing protein compare
MMJJ_RS00050 -3.2 -10.8 AAA family ATPase compare
MMJJ_RS00045 -3.1 -16.4 CO dehydrogenase/CO-methylating acetyl-CoA synthase complex subunit beta compare
MMJJ_RS00450 -3.1 -1.3 DUF126 domain-containing protein compare
MMJJ_RS05575 -3.0 -2.6 2-amino-5-formylamino-6-ribosylaminopyrimidin- 4(3H)-one 5'-monophosphate deformylase compare
MMJJ_RS00060 -3.0 -18.5 acetyl-CoA decarbonylase/synthase complex subunit gamma compare
MMJJ_RS06225 -3.0 -1.0 adenosylmethionine decarboxylase compare
MMJJ_RS03095 -3.0 -1.1 bifunctional N(6)-L-threonylcarbamoyladenine synthase/serine/threonine protein kinase compare
MMJJ_RS08130 -3.0 -0.8 translation initiation factor IF-2 subunit gamma compare
MMJJ_RS03995 -2.9 -5.2 PHP domain-containing protein compare
MMJJ_RS04475 -2.9 -2.9 3,4-dihydroxy-2-butanone-4-phosphate synthase compare
MMJJ_RS00075 -2.9 -12.6 AAA family ATPase compare
MMJJ_RS01865 -2.9 -5.4 peptidyl-tRNA hydrolase Pth2 compare
MMJJ_RS03115 -2.9 -4.9 sulfopyruvate decarboxylase subunit alpha compare
MMJJ_RS00055 -2.9 -8.6 CO dehydrogenase/acetyl-CoA synthase subunit delta compare
MMJJ_RS04575 -2.8 -11.1 DUF116 domain-containing protein compare
MMJJ_RS07505 -2.8 -0.7 DNA-directed RNA polymerase subunit K compare
MMJJ_RS03155 -2.8 -8.0 hypothetical protein compare
MMJJ_RS00035 -2.8 -15.2 CO dehydrogenase/acetyl-CoA synthase complex subunit alpha compare
MMJJ_RS00040 -2.8 -8.7 CO dehydrogenase/acetyl-CoA synthase complex subunit epsilon compare
MMJJ_RS04760 -2.8 -16.0 5,10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdC compare
MMJJ_RS09055 -2.8 -11.7 NFACT family protein compare
MMJJ_RS08500 -2.8 -5.6 L-sulfolactate dehydrogenase compare
MMJJ_RS06750 -2.8 -1.0 homoaconitase large subunit compare
MMJJ_RS03810 -2.8 -2.3 AIR synthase-related protein compare
MMJJ_RS05535 -2.8 -12.8 hypothetical protein compare
MMJJ_RS07655 -2.7 -12.1 hypothetical protein compare
MMJJ_RS04755 -2.7 -12.6 5,10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdB compare
MMJJ_RS01360 -2.7 -1.0 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
MMJJ_RS00480 -2.7 -11.0 flippase compare
MMJJ_RS00065 -2.7 -10.1 4Fe-4S dicluster domain-containing protein compare
MMJJ_RS00935 -2.7 -12.2 nickel pincer cofactor biosynthesis protein LarB compare
MMJJ_RS03920 -2.7 -13.6 nickel pincer cofactor biosynthesis protein LarC compare
MMJJ_RS08080 -2.7 -9.7 TIGR00300 family protein compare
MMJJ_RS05590 -2.7 -1.6 homoserine dehydrogenase compare
MMJJ_RS03360 -2.7 -1.1 hypothetical protein compare
MMJJ_RS06915 -2.7 -11.8 helix-turn-helix domain-containing protein compare
MMJJ_RS07190 -2.7 -2.5 RtcB family protein compare
MMJJ_RS00425 -2.6 -3.7 hypothetical protein compare
MMJJ_RS05170 -2.6 -10.4 Nif3-like dinuclear metal center hexameric protein compare
MMJJ_RS05190 -2.6 -5.7 gamma carbonic anhydrase family protein compare
MMJJ_RS07975 -2.6 -10.0 ATP-dependent sacrificial sulfur transferase LarE compare
MMJJ_RS02200 -2.6 -7.9 chorismate pyruvate-lyase family protein compare
MMJJ_RS05770 -2.6 -1.7 flagellar protein D compare
MMJJ_RS03200 -2.6 -0.9 uroporphyrinogen-III synthase compare
MMJJ_RS05360 -2.5 -4.8 nickel-responsive transcriptional regulator NikR compare
MMJJ_RS00210 -2.5 -1.4 DUF530 family protein compare
MMJJ_RS08325 -2.5 -1.4 glycosyltransferase family 2 protein compare
MMJJ_RS06910 -2.5 -2.1 energy-converting NiFe hydrogenase A subunit EhaA compare
MMJJ_RS08840 -2.5 -3.1 calcium/sodium antiporter compare
MMJJ_RS03125 -2.5 -2.2 GMC oxidoreductase compare
MMJJ_RS07485 -2.5 -8.7 DedA family protein compare
MMJJ_RS04200 -2.5 -2.7 triphosphoribosyl-dephospho-CoA synthase compare
MMJJ_RS08625 -2.5 -5.2 magnesium/cobalt transporter CorA compare
MMJJ_RS07415 -2.5 -1.8 polyprenyl diphosphate synthase compare
MMJJ_RS04790 -2.5 -1.6 biotin--[acetyl-CoA-carboxylase] ligase compare
MMJJ_RS07245 -2.5 -3.3 amidohydrolase family protein compare
MMJJ_RS04750 -2.5 -9.2 5,10-methenyltetrahydromethanopterin hydrogenase compare
MMJJ_RS08010 -2.5 -7.1 phosphoadenosine phosphosulfate reductase family protein compare
MMJJ_RS04050 -2.4 -0.6 dihydroneopterin aldolase family protein compare
MMJJ_RS04685 -2.4 -5.7 carbamoyltransferase HypF compare
MMJJ_RS08660 -2.4 -1.9 acetylornithine transaminase compare
MMJJ_RS03160 -2.4 -11.9 winged helix-turn-helix transcriptional regulator compare
MMJJ_RS03875 -2.4 -1.1 CBS domain-containing protein compare
MMJJ_RS03490 -2.4 -1.5 ribonuclease VapC compare
MMJJ_RS04565 -2.4 -2.1 sirohydrochlorin nickelochelatase compare
MMJJ_RS05610 -2.4 -2.6 CDP-2,3-bis-(O-geranylgeranyl)-sn-glycerol synthase compare
MMJJ_RS04800 -2.4 -3.8 2-phospho-L-lactate guanylyltransferase compare
MMJJ_RS06805 -2.4 -1.7 monovalent cation/H+ antiporter subunit E compare
MMJJ_RS06390 -2.4 -0.7 NADPH-dependent F420 reductase compare
MMJJ_RS03110 -2.4 -2.8 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase compare
MMJJ_RS04700 -2.3 -5.0 deoxyhypusine synthase compare
MMJJ_RS06110 -2.3 -1.4 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC compare
MMJJ_RS03930 -2.3 -12.7 hypothetical protein compare
MMJJ_RS03785 -2.3 -1.6 hypothetical protein compare
MMJJ_RS03760 -2.3 -1.1 hydrogenase maturation nickel metallochaperone HypA compare
MMJJ_RS09085 -2.3 -11.2 minichromosome maintenance protein MCM compare
MMJJ_RS03620 -2.3 -2.3 DUF2097 domain-containing protein compare
MMJJ_RS04720 -2.3 -1.1 IMP dehydrogenase compare
MMJJ_RS07715 -2.2 -2.4 UbiD family decarboxylase compare
MMJJ_RS00080 -2.2 -11.1 DUF166 domain-containing protein compare
MMJJ_RS06940 -2.2 -9.6 metalloregulator ArsR/SmtB family transcription factor compare
MMJJ_RS03150 -2.2 -3.8 2-phospho-L-lactate transferase compare
MMJJ_RS07670 -2.2 -13.8 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C-terminal domain compare
MMJJ_RS08575 -2.2 -3.0 hypothetical protein compare
MMJJ_RS00265 -2.2 -4.8 TIGR02253 family HAD-type hydrolase compare
MMJJ_RS08430 -2.2 -5.3 small nuclear ribonucleoprotein compare
MMJJ_RS05135 -2.2 -0.9 50S ribosomal protein L18Ae compare
MMJJ_RS00195 -2.2 -1.8 precorrin-3B C(17)-methyltransferase compare
MMJJ_RS07040 -2.2 -1.0 preprotein translocase subunit SecY compare
MMJJ_RS01870 -2.2 -0.7 methanogenesis marker 15 protein compare
MMJJ_RS06835 -2.2 -10.6 4Fe-4S binding protein compare
MMJJ_RS08330 -2.2 -1.3 SufD family Fe-S cluster assembly protein compare
MMJJ_RS06155 -2.1 -3.5 phosphatidylglycerophosphatase A compare
MMJJ_RS03270 -2.1 -1.3 ribosome biogenesis/translation initiation ATPase RLI compare
MMJJ_RS07960 -2.1 -2.3 quinolinate synthase NadA compare
MMJJ_RS08335 -2.1 -1.1 ABC transporter ATP-binding protein compare
MMJJ_RS08020 -2.1 -5.5 nucleotidyltransferase domain-containing protein compare
MMJJ_RS07665 -2.1 -14.0 formate dehydrogenase subunit alpha compare
MMJJ_RS04995 -2.1 -3.8 Tfx family DNA-binding protein compare
MMJJ_RS03060 -2.1 -0.9 methanogenesis marker 7 protein compare
MMJJ_RS07380 -2.1 -6.4 sulfide-dependent adenosine diphosphate thiazole synthase compare
MMJJ_RS08060 -2.1 -7.7 DNA repair and recombination protein RadA compare
MMJJ_RS03670 -2.1 -2.4 precorrin-2 C(20)-methyltransferase compare
MMJJ_RS06600 -2.1 -1.8 DUF555 domain-containing protein compare
MMJJ_RS06175 -2.1 -1.0 DUF1743 domain-containing protein compare
MMJJ_RS06755 -2.1 -11.9 diadenylate cyclase compare
MMJJ_RS03580 -2.1 -1.2 TIGR00303 family protein compare
MMJJ_RS07590 -2.1 -10.2 flap endonuclease-1 compare
MMJJ_RS08095 -2.1 -2.5 cobyric acid synthase CobQ compare
MMJJ_RS06860 -2.1 -1.8 hypothetical protein compare
MMJJ_RS05380 -2.0 -0.7 hypothetical protein compare
MMJJ_RS01410 -2.0 -5.0 archaeal proteasome endopeptidase complex subunit beta compare
MMJJ_RS02855 -2.0 -5.5 DEAD/DEAH box helicase compare
MMJJ_RS07950 -2.0 -1.6 4Fe-4S binding protein compare
MMJJ_RS00415 -2.0 -5.2 DedA family protein compare
MMJJ_RS06220 -2.0 -3.8 polyamine aminopropyltransferase compare
MMJJ_RS04655 -2.0 -5.3 FAD-dependent oxidoreductase compare
MMJJ_RS04985 -2.0 -1.0 glutamyl-tRNA reductase compare
MMJJ_RS07705 -2.0 -1.7 GTP-binding protein EngB compare
MMJJ_RS05810 -2.0 -4.4 precorrin-4 C(11)-methyltransferase compare
MMJJ_RS06660 -2.0 -7.0 DUF1188 domain-containing protein compare
MMJJ_RS07345 -2.0 -6.0 homocysteine biosynthesis protein compare
MMJJ_RS05560 -2.0 -2.7 30S ribosomal protein S27e compare
MMJJ_RS05490 -2.0 -0.9 imidazole glycerol phosphate synthase subunit HisF compare
MMJJ_RS00560 -1.9 -1.9 homoisocitrate dehydrogenase compare
MMJJ_RS00285 -1.9 -9.8 UPF0254 family protein compare
MMJJ_RS06665 -1.9 -5.2 DUF3236 domain-containing protein compare
MMJJ_RS04525 -1.9 -2.4 hypothetical protein compare
MMJJ_RS06255 -1.9 -4.4 tRNA uridine(34) 5-carboxymethylaminomethyl modification radical SAM/GNAT enzyme Elp3 compare
MMJJ_RS01355 -1.9 -2.0 UDP-N-acetyl-D-mannosamine dehydrogenase compare
MMJJ_RS04615 -1.9 -2.8 methanogenesis marker 3 protein compare
MMJJ_RS00125 -1.9 -1.4 KEOPS complex subunit Cgi121 compare
MMJJ_RS06725 -1.9 -9.3 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMJJ_RS06250 -1.9 -0.8 nicotinamide-nucleotide adenylyltransferase compare
MMJJ_RS06180 -1.9 -1.6 tryptophan--tRNA ligase compare
MMJJ_RS01200 -1.9 -1.2 PRC-barrel domain-containing protein compare
MMJJ_RS08585 -1.9 -5.2 M42 family metallopeptidase compare
MMJJ_RS09095 -1.9 -6.2 MMPL family transporter compare
MMJJ_RS00550 -1.9 -6.8 AIR synthase-related protein compare
MMJJ_RS08005 -1.9 -12.3 formate dehydrogenase accessory sulfurtransferase FdhD compare
MMJJ_RS03655 -1.9 -3.8 replication factor C large subunit compare
MMJJ_RS05415 -1.8 -0.9 hypothetical protein compare
MMJJ_RS07955 -1.8 -5.7 ThiF family adenylyltransferase compare
MMJJ_RS02045 -1.8 -1.4 molybdenum cofactor guanylyltransferase compare
MMJJ_RS01690 -1.8 -2.3 methanogenesis marker 12 protein compare
MMJJ_RS05765 -1.8 -0.6 flagellar protein E compare
MMJJ_RS05780 -1.8 -1.9 flagellin compare
MMJJ_RS00600 -1.8 -1.5 hydroxymethylbilane synthase compare
MMJJ_RS09295 -1.8 -0.6 hypothetical protein compare
MMJJ_RS07265 -1.8 -7.5 tRNA (adenine-N1)-methyltransferase compare
MMJJ_RS03080 -1.8 -6.5 carbohydrate kinase family protein compare
MMJJ_RS00205 -1.8 -2.8 adenosylcobinamide-phosphate synthase CbiB compare
MMJJ_RS03005 -1.8 -1.6 Ni-sirohydrochlorin a,c-diamide reductive cyclase catalytic subunit compare
MMJJ_RS06760 -1.8 -2.3 Ni-sirohydrochlorin a,c-diamide synthase compare
MMJJ_RS02275 -1.8 -2.9 nucleotidyltransferase domain-containing protein compare
MMJJ_RS09130 -1.7 -1.0 NFYB/HAP3 family transcription factor subunit compare
MMJJ_RS08810 -1.7 -0.6 DUF4040 domain-containing protein compare
MMJJ_RS03205 -1.7 -5.2 metallophosphoesterase compare
MMJJ_RS05650 -1.7 -1.2 formylmethanofuran dehydrogenase subunit B compare
MMJJ_RS05070 -1.7 -0.8 DNA primase catalytic subunit PriS compare
MMJJ_RS04595 -1.7 -3.1 hypothetical protein compare
MMJJ_RS07945 -1.7 -1.1 4Fe-4S binding protein compare
MMJJ_RS08535 -1.7 -1.7 NOL1/NOP2/sun family putative RNA methylase compare
MMJJ_RS00430 -1.7 -1.7 ribonuclease Z compare
MMJJ_RS01350 -1.7 -4.0 sodium:proton antiporter compare
MMJJ_RS06695 -1.6 -1.5 amidohydrolase compare
MMJJ_RS01475 -1.6 -0.8 signal recognition particle-docking protein FtsY compare
MMJJ_RS01880 -1.6 -1.9 RlmE family RNA methyltransferase compare
MMJJ_RS01960 -1.6 -3.5 glycosyltransferase family 2 protein compare
MMJJ_RS05375 -1.6 -10.0 radical SAM protein compare
MMJJ_RS07410 -1.6 -1.9 methanogenesis marker protein Mmp4/MtxX compare
MMJJ_RS06185 -1.6 -3.6 cobalamin biosynthesis protein compare
MMJJ_RS01765 -1.6 -6.3 winged helix-turn-helix domain-containing protein compare
MMJJ_RS05260 -1.6 -2.8 ATP-grasp domain-containing protein compare
MMJJ_RS05655 -1.6 -4.4 HisA/HisF family protein compare
MMJJ_RS00370 -1.6 -0.6 asparagine synthase (glutamine-hydrolyzing) compare
MMJJ_RS09100 -1.6 -5.8 COG1361 S-layer family protein compare
MMJJ_RS06935 -1.6 -5.8 GTP-binding protein compare
MMJJ_RS04680 -1.6 -7.5 topoisomerase DNA-binding C4 zinc finger domain-containing protein compare
MMJJ_RS04180 -1.6 -1.5 metalloregulator ArsR/SmtB family transcription factor compare
MMJJ_RS02205 -1.6 -6.5 hypothetical protein compare
MMJJ_RS03295 -1.6 -6.7 PHP domain-containing protein compare
MMJJ_RS05445 -1.6 -0.8 2-oxoacid:acceptor oxidoreductase subunit alpha compare


Specific Phenotypes

For 1 genes in this experiment

For stress Anhydrotetracycline hydrochloride in Methanococcus maripaludis JJ

For stress Anhydrotetracycline hydrochloride across organisms