Experiment set8S496 for Methanococcus maripaludis JJ

Compare to:

McCas_formate_complete sodium nitrite 0.125 mM

200 most important genes:

  gene name fitness t score description  
MMJJ_RS00450 -4.0 -1.9 DUF126 domain-containing protein compare
MMJJ_RS00580 -3.9 -1.6 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase subunit CofG compare
MMJJ_RS05360 -3.9 -7.2 nickel-responsive transcriptional regulator NikR compare
MMJJ_RS07950 -3.5 -2.2 4Fe-4S binding protein compare
MMJJ_RS02935 -3.5 -2.8 DNA-directed RNA polymerase subunit E'' compare
MMJJ_RS02040 -3.5 -1.8 Asp-tRNA(Asn) amidotransferase subunit GatC compare
MMJJ_RS09175 -3.3 -1.1 anthranilate synthase component I compare
MMJJ_RS06875 -3.3 -2.4 hypothetical protein compare
MMJJ_RS06910 -3.3 -2.7 energy-converting NiFe hydrogenase A subunit EhaA compare
MMJJ_RS04200 -3.2 -2.2 triphosphoribosyl-dephospho-CoA synthase compare
MMJJ_RS08625 -3.2 -4.9 magnesium/cobalt transporter CorA compare
MMJJ_RS06240 -3.2 -1.8 dihydropteroate synthase-like protein compare
MMJJ_RS09130 -3.2 -1.5 NFYB/HAP3 family transcription factor subunit compare
MMJJ_RS03065 -3.1 -13.2 CBS domain-containing protein compare
MMJJ_RS00050 -3.1 -11.2 AAA family ATPase compare
MMJJ_RS01820 -3.1 -6.7 MJ1244 family protein compare
MMJJ_RS07410 -3.0 -2.9 methanogenesis marker protein Mmp4/MtxX compare
MMJJ_RS01690 -3.0 -3.4 methanogenesis marker 12 protein compare
MMJJ_RS00040 -3.0 -10.1 CO dehydrogenase/acetyl-CoA synthase complex subunit epsilon compare
MMJJ_RS00210 -2.9 -2.0 DUF530 family protein compare
MMJJ_RS03150 -2.9 -2.8 2-phospho-L-lactate transferase compare
MMJJ_RS07360 -2.9 -1.7 TIGR00269 family protein compare
MMJJ_RS08500 -2.9 -7.7 L-sulfolactate dehydrogenase compare
MMJJ_RS02090 -2.9 -4.3 tyramine--L-glutamate ligase compare
MMJJ_RS07000 -2.8 -1.8 TrkH family potassium uptake protein compare
MMJJ_RS08535 -2.8 -3.7 NOL1/NOP2/sun family putative RNA methylase compare
MMJJ_RS06860 -2.7 -3.4 hypothetical protein compare
MMJJ_RS05445 -2.7 -1.2 2-oxoacid:acceptor oxidoreductase subunit alpha compare
MMJJ_RS06155 -2.7 -4.7 phosphatidylglycerophosphatase A compare
MMJJ_RS08095 -2.7 -3.1 cobyric acid synthase CobQ compare
MMJJ_RS05415 -2.6 -1.4 hypothetical protein compare
MMJJ_RS08320 -2.6 -2.5 CDP-diacylglycerol--serine O-phosphatidyltransferase compare
MMJJ_RS08020 -2.6 -7.2 nucleotidyltransferase domain-containing protein compare
MMJJ_RS00035 -2.6 -15.5 CO dehydrogenase/acetyl-CoA synthase complex subunit alpha compare
MMJJ_RS07705 -2.6 -2.5 GTP-binding protein EngB compare
MMJJ_RS03270 -2.6 -1.9 ribosome biogenesis/translation initiation ATPase RLI compare
MMJJ_RS06695 -2.6 -2.6 amidohydrolase compare
MMJJ_RS04520 -2.5 -3.4 coenzyme F430 synthase compare
MMJJ_RS04730 -2.5 -2.9 tyrosine decarboxylase MfnA compare
MMJJ_RS05650 -2.5 -1.6 formylmethanofuran dehydrogenase subunit B compare
MMJJ_RS05155 -2.5 -4.9 5-amino-6-(D-ribitylamino)uracil--L-tyrosine 4-hydroxyphenyl transferase CofH compare
MMJJ_RS03200 -2.5 -1.8 uroporphyrinogen-III synthase compare
MMJJ_RS05575 -2.5 -3.7 2-amino-5-formylamino-6-ribosylaminopyrimidin- 4(3H)-one 5'-monophosphate deformylase compare
MMJJ_RS08430 -2.5 -6.2 small nuclear ribonucleoprotein compare
MMJJ_RS02200 -2.5 -8.5 chorismate pyruvate-lyase family protein compare
MMJJ_RS03190 -2.5 -2.2 phosphopyruvate hydratase compare
MMJJ_RS04970 -2.5 -1.7 DUF655 domain-containing protein compare
MMJJ_RS04800 -2.5 -4.5 2-phospho-L-lactate guanylyltransferase compare
MMJJ_RS01870 -2.4 -1.3 methanogenesis marker 15 protein compare
MMJJ_RS00125 -2.4 -2.0 KEOPS complex subunit Cgi121 compare
MMJJ_RS08840 -2.4 -4.4 calcium/sodium antiporter compare
MMJJ_RS05720 -2.4 -2.2 glutamine--fructose-6-phosphate transaminase (isomerizing) compare
MMJJ_RS01750 -2.4 -1.4 ferrous iron transport protein A compare
MMJJ_RS05070 -2.4 -1.2 DNA primase catalytic subunit PriS compare
MMJJ_RS01810 -2.4 -1.3 methyl coenzyme M reductase system, component A2 compare
MMJJ_RS05535 -2.4 -11.7 hypothetical protein compare
MMJJ_RS06250 -2.4 -1.4 nicotinamide-nucleotide adenylyltransferase compare
MMJJ_RS00055 -2.3 -10.1 CO dehydrogenase/acetyl-CoA synthase subunit delta compare
MMJJ_RS00080 -2.3 -12.5 DUF166 domain-containing protein compare
MMJJ_RS01830 -2.3 -3.2 tRNA(Ile)(2)-agmatinylcytidine synthase compare
MMJJ_RS07665 -2.2 -15.7 formate dehydrogenase subunit alpha compare
MMJJ_RS05065 -2.2 -3.6 (4-{4-[2-(gamma-L- glutamylamino)ethyl]phenoxymethyl}furan-2-yl)methanamine synthase compare
MMJJ_RS06915 -2.2 -11.0 helix-turn-helix domain-containing protein compare
MMJJ_RS00045 -2.2 -12.6 CO dehydrogenase/CO-methylating acetyl-CoA synthase complex subunit beta compare
MMJJ_RS03140 -2.2 -9.5 tRNA-dihydrouridine synthase compare
MMJJ_RS06180 -2.2 -2.4 tryptophan--tRNA ligase compare
MMJJ_RS05560 -2.2 -6.0 30S ribosomal protein S27e compare
MMJJ_RS04615 -2.2 -4.2 methanogenesis marker 3 protein compare
MMJJ_RS07380 -2.1 -7.8 sulfide-dependent adenosine diphosphate thiazole synthase compare
MMJJ_RS00355 -2.1 -3.1 ribonuclease P protein component 4 compare
MMJJ_RS01865 -2.1 -6.0 peptidyl-tRNA hydrolase Pth2 compare
MMJJ_RS04980 -2.1 -4.4 bifunctional precorrin-2 dehydrogenase/sirohydrochlorin ferrochelatase compare
MMJJ_RS05190 -2.1 -7.7 gamma carbonic anhydrase family protein compare
MMJJ_RS03005 -2.1 -2.4 Ni-sirohydrochlorin a,c-diamide reductive cyclase catalytic subunit compare
MMJJ_RS07670 -2.1 -13.8 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C-terminal domain compare
MMJJ_RS09375 -2.1 -1.4 hypothetical protein compare
MMJJ_RS03580 -2.1 -2.2 TIGR00303 family protein compare
MMJJ_RS05330 -2.1 -1.3 DNA polymerase II large subunit compare
MMJJ_RS00060 -2.0 -11.5 acetyl-CoA decarbonylase/synthase complex subunit gamma compare
MMJJ_RS06725 -2.0 -10.3 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMJJ_RS03615 -2.0 -2.0 cobalt-precorrin-8 methylmutase compare
MMJJ_RS03785 -2.0 -2.2 hypothetical protein compare
MMJJ_RS00270 -2.0 -1.8 adenosylcobinamide-GDP ribazoletransferase compare
MMJJ_RS09035 -2.0 -5.5 OB-fold nucleic acid binding domain-containing protein compare
MMJJ_RS01355 -2.0 -2.8 UDP-N-acetyl-D-mannosamine dehydrogenase compare
MMJJ_RS01755 -2.0 -1.6 ferrous iron transport protein B compare
MMJJ_RS07960 -2.0 -2.9 quinolinate synthase NadA compare
MMJJ_RS00600 -2.0 -2.1 hydroxymethylbilane synthase compare
MMJJ_RS08340 -2.0 -5.3 archaeoflavoprotein AfpA compare
MMJJ_RS07590 -2.0 -9.3 flap endonuclease-1 compare
MMJJ_RS03230 -2.0 -3.5 NAD(P)/FAD-dependent oxidoreductase compare
MMJJ_RS01815 -2.0 -3.3 DUF134 domain-containing protein compare
MMJJ_RS03095 -1.9 -1.9 bifunctional N(6)-L-threonylcarbamoyladenine synthase/serine/threonine protein kinase compare
MMJJ_RS08155 -1.9 -2.8 cobalt-precorrin-5B (C(1))-methyltransferase CbiD compare
MMJJ_RS04050 -1.9 -1.0 dihydroneopterin aldolase family protein compare
MMJJ_RS07345 -1.9 -5.8 homocysteine biosynthesis protein compare
MMJJ_RS04150 -1.9 -1.9 DUF5379 domain-containing protein compare
MMJJ_RS00215 -1.9 -1.7 CCA tRNA nucleotidyltransferase compare
MMJJ_RS07655 -1.9 -11.7 hypothetical protein compare
MMJJ_RS05810 -1.9 -4.7 precorrin-4 C(11)-methyltransferase compare
MMJJ_RS07630 -1.9 -9.1 hypothetical protein compare
MMJJ_RS08660 -1.9 -2.8 acetylornithine transaminase compare
MMJJ_RS04985 -1.8 -2.9 glutamyl-tRNA reductase compare
MMJJ_RS08005 -1.8 -12.3 formate dehydrogenase accessory sulfurtransferase FdhD compare
MMJJ_RS09030 -1.8 -10.6 hypothetical protein compare
MMJJ_RS03875 -1.8 -2.5 CBS domain-containing protein compare
MMJJ_RS01935 -1.8 -2.2 O-phosphoseryl-tRNA(Sec) selenium transferase compare
MMJJ_RS03810 -1.8 -2.9 AIR synthase-related protein compare
MMJJ_RS03060 -1.8 -2.2 methanogenesis marker 7 protein compare
MMJJ_RS04685 -1.8 -5.7 carbamoyltransferase HypF compare
MMJJ_RS07350 -1.8 -2.3 4Fe-4S binding protein compare
MMJJ_RS07470 -1.8 -1.5 50S ribosome-binding GTPase compare
MMJJ_RS08010 -1.8 -5.7 phosphoadenosine phosphosulfate reductase family protein compare
MMJJ_RS00425 -1.7 -2.7 hypothetical protein compare
MMJJ_RS07640 -1.7 -13.8 cache domain-containing protein compare
MMJJ_RS00550 -1.7 -7.0 AIR synthase-related protein compare
MMJJ_RS01475 -1.7 -1.4 signal recognition particle-docking protein FtsY compare
MMJJ_RS06185 -1.7 -5.2 cobalamin biosynthesis protein compare
MMJJ_RS00030 -1.7 -8.8 thymidylate synthase compare
MMJJ_RS04790 -1.7 -2.5 biotin--[acetyl-CoA-carboxylase] ligase compare
MMJJ_RS07635 -1.7 -10.7 response regulator transcription factor compare
MMJJ_RS07040 -1.7 -1.4 preprotein translocase subunit SecY compare
MMJJ_RS05280 -1.7 -1.0 hypothetical protein compare
MMJJ_RS08080 -1.7 -7.1 TIGR00300 family protein compare
MMJJ_RS07505 -1.7 -0.9 DNA-directed RNA polymerase subunit K compare
MMJJ_RS05655 -1.7 -6.5 HisA/HisF family protein compare
MMJJ_RS07660 -1.7 -7.4 carbonic anhydrase compare
MMJJ_RS07945 -1.7 -1.9 4Fe-4S binding protein compare
MMJJ_RS05935 -1.6 -1.6 Era-like GTP-binding protein compare
MMJJ_RS07425 -1.6 -8.8 MBL fold metallo-hydrolase compare
MMJJ_RS02045 -1.6 -2.1 molybdenum cofactor guanylyltransferase compare
MMJJ_RS04870 -1.6 -1.7 tRNA-Asp compare
MMJJ_RS07155 -1.6 -6.7 [5-(aminomethyl)furan-3-yl]methyl phosphate kinase compare
MMJJ_RS03710 -1.6 -4.8 DUF2111 domain-containing protein compare
MMJJ_RS04875 -1.6 -1.1 tRNA-Lys compare
MMJJ_RS07190 -1.6 -3.1 RtcB family protein compare
MMJJ_RS03125 -1.6 -2.7 GMC oxidoreductase compare
MMJJ_RS04655 -1.6 -5.2 FAD-dependent oxidoreductase compare
MMJJ_RS01765 -1.6 -6.0 winged helix-turn-helix domain-containing protein compare
MMJJ_RS01415 -1.6 -1.6 beta-CASP ribonuclease aCPSF1 compare
MMJJ_RS01200 -1.6 -1.7 PRC-barrel domain-containing protein compare
MMJJ_RS01280 -1.6 -10.5 hydroxylamine reductase conserved
MMJJ_RS03655 -1.6 -3.3 replication factor C large subunit compare
MMJJ_RS05610 -1.6 -3.4 CDP-2,3-bis-(O-geranylgeranyl)-sn-glycerol synthase compare
MMJJ_RS02855 -1.6 -5.8 DEAD/DEAH box helicase compare
MMJJ_RS07245 -1.6 -3.2 amidohydrolase family protein compare
MMJJ_RS08170 -1.5 -1.6 diaminopimelate decarboxylase compare
MMJJ_RS06390 -1.5 -1.2 NADPH-dependent F420 reductase compare
MMJJ_RS08330 -1.5 -2.0 SufD family Fe-S cluster assembly protein compare
MMJJ_RS00065 -1.5 -7.9 4Fe-4S dicluster domain-containing protein compare
MMJJ_RS06705 -1.5 -3.8 bifunctional NADP phosphatase/NAD kinase compare
MMJJ_RS03110 -1.5 -2.8 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase compare
MMJJ_RS00075 -1.5 -7.3 AAA family ATPase compare
MMJJ_RS06840 -1.5 -1.7 nickel-dependent hydrogenase large subunit compare
MMJJ_RS00205 -1.5 -4.0 adenosylcobinamide-phosphate synthase CbiB compare
MMJJ_RS06255 -1.5 -4.6 tRNA uridine(34) 5-carboxymethylaminomethyl modification radical SAM/GNAT enzyme Elp3 compare
MMJJ_RS06760 -1.5 -3.2 Ni-sirohydrochlorin a,c-diamide synthase compare
MMJJ_RS03820 -1.5 -1.4 hydrogenase formation protein HypD compare
MMJJ_RS03840 -1.5 -1.0 DHH family phosphoesterase compare
MMJJ_RS01405 -1.5 -1.0 proline--tRNA ligase compare
MMJJ_RS05930 -1.5 -0.7 cell division protein SepF compare
MMJJ_RS06490 -1.5 -0.9 methanogenesis marker 2 protein compare
MMJJ_RS04485 -1.5 -5.2 riboflavin synthase compare
MMJJ_RS01285 -1.5 -4.5 CopG family ribbon-helix-helix protein compare
MMJJ_RS07650 -1.4 -11.1 formate/nitrite transporter family protein compare
MMJJ_RS03310 -1.4 -2.4 hypothetical protein compare
MMJJ_RS05490 -1.4 -2.0 imidazole glycerol phosphate synthase subunit HisF compare
MMJJ_RS04670 -1.4 -5.7 DUF2117 domain-containing protein compare
MMJJ_RS01600 -1.4 -1.2 radical SAM protein compare
MMJJ_RS06835 -1.4 -7.7 4Fe-4S binding protein compare
MMJJ_RS01360 -1.4 -1.6 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
MMJJ_RS06565 -1.4 -6.7 segregation/condensation protein A compare
MMJJ_RS08575 -1.4 -2.8 hypothetical protein compare
MMJJ_RS02920 -1.4 -1.2 30S ribosomal protein S27ae compare
MMJJ_RS03195 -1.4 -3.2 hypothetical protein compare
MMJJ_RS04650 -1.4 -4.3 nitrogenase iron protein compare
MMJJ_RS03620 -1.4 -3.0 DUF2097 domain-containing protein compare
MMJJ_RS06510 -1.4 -1.0 LL-diaminopimelate aminotransferase compare
MMJJ_RS04010 -1.3 -5.1 archaeal proteasome endopeptidase complex subunit alpha compare
MMJJ_RS00665 -1.3 -8.3 lysine 2,3-aminomutase compare
MMJJ_RS08035 -1.3 -4.9 cobalt-precorrin-7 (C(5))-methyltransferase compare
MMJJ_RS03815 -1.3 -0.9 nascent polypeptide-associated complex protein compare
MMJJ_RS08345 -1.3 -9.3 flavodoxin family protein compare
MMJJ_RS06740 -1.3 -5.9 energy-coupling factor ABC transporter substrate-binding protein compare
MMJJ_RS08850 -1.3 -1.5 succinate dehydrogenase/fumarate reductase iron-sulfur subunit compare
MMJJ_RS03765 -1.3 -4.7 hypothetical protein compare
MMJJ_RS08175 -1.3 -6.2 winged helix-turn-helix transcriptional regulator compare
MMJJ_RS05195 -1.3 -3.5 hypothetical protein compare
MMJJ_RS03660 -1.3 -2.1 DUF447 family protein compare
MMJJ_RS00570 -1.3 -0.9 ribonuclease P compare
MMJJ_RS03240 -1.3 -1.6 histone family protein compare
MMJJ_RS06855 -1.3 -0.8 DUF2104 domain-containing protein compare
MMJJ_RS03080 -1.3 -6.8 carbohydrate kinase family protein compare
MMJJ_RS00935 -1.3 -7.8 nickel pincer cofactor biosynthesis protein LarB compare
MMJJ_RS05295 -1.3 -6.5 cobyrinic acid a,c-diamide synthase compare
MMJJ_RS03895 -1.3 -1.5 hydrogenase expression/formation protein HypE compare
MMJJ_RS08135 -1.3 -3.9 30S ribosomal protein S6e compare
MMJJ_RS07715 -1.2 -2.0 UbiD family decarboxylase compare
MMJJ_RS01345 -1.2 -2.6 (5-formylfuran-3-yl)methyl phosphate synthase compare
MMJJ_RS05135 -1.2 -1.0 50S ribosomal protein L18Ae compare


Specific Phenotypes

For 3 genes in this experiment

For stress Sodium nitrite in Methanococcus maripaludis JJ

For stress Sodium nitrite across organisms