Experiment set8S496 for Methanococcus maripaludis JJ

Compare to:

McCas_formate_complete sodium nitrite 0.125 mM

200 most detrimental genes:

  gene name fitness t score description  
MMJJ_RS07280 +2.0 8.5 phosphomannomutase/phosphoglucomutase compare
MMJJ_RS07680 +1.8 9.5 glucose-6-phosphate isomerase compare
MMJJ_RS03725 +1.7 5.1 sulfurtransferase TusA family protein compare
MMJJ_RS04005 +1.7 8.9 acetate--CoA ligase family protein compare
MMJJ_RS06535 +1.6 8.9 UPF0104 family protein compare
MMJJ_RS03835 +1.4 3.8 DUF504 domain-containing protein compare
MMJJ_RS07175 +1.4 10.0 DEAD/DEAH box helicase compare
MMJJ_RS06210 +1.4 4.9 hypothetical protein compare
MMJJ_RS08870 +1.4 1.6 2-isopropylmalate synthase compare
MMJJ_RS03605 +1.4 3.6 TIGR00297 family protein compare
MMJJ_RS08725 +1.4 7.2 flippase compare
MMJJ_RS01855 +1.4 8.1 MBL fold metallo-hydrolase compare
MMJJ_RS00440 +1.3 6.4 selenide, water dikinase SelD compare
MMJJ_RS08720 +1.3 7.4 UDP-glucose/GDP-mannose dehydrogenase family protein compare
MMJJ_RS08750 +1.3 7.2 glycosyltransferase compare
MMJJ_RS08710 +1.3 5.4 UTP--glucose-1-phosphate uridylyltransferase GalU compare
MMJJ_RS03515 +1.3 5.2 GPR1/FUN34/YaaH family transporter compare
MMJJ_RS05685 +1.2 4.4 class III signal peptide-containing protein compare
MMJJ_RS07850 +1.1 8.1 ATP-binding protein compare
MMJJ_RS07785 +1.1 1.4 fumarate reductase subunit A compare
MMJJ_RS07185 +1.1 2.0 DUF371 domain-containing protein compare
MMJJ_RS04575 +1.1 4.8 DUF116 domain-containing protein compare
MMJJ_RS06945 +1.1 7.1 molybdopterin-guanine dinucleotide biosynthesis protein MobB compare
MMJJ_RS08935 +1.1 0.6 TIGR00288 family NYN domain-containing protein compare
MMJJ_RS08760 +1.1 5.6 glycosyltransferase family 9 protein compare
MMJJ_RS04975 +1.0 0.7 glycosyltransferase family 4 protein compare
MMJJ_RS06925 +1.0 1.4 GMP synthase subunit A compare
MMJJ_RS06675 +1.0 5.7 TIGR01212 family radical SAM protein compare
MMJJ_RS00370 +1.0 0.8 asparagine synthase (glutamine-hydrolyzing) compare
MMJJ_RS08775 +1.0 5.6 PfkB family carbohydrate kinase compare
MMJJ_RS08125 +1.0 5.7 DNA double-strand break repair nuclease NurA compare
MMJJ_RS09300 +1.0 2.1 hypothetical protein compare
MMJJ_RS08785 +0.9 4.8 D-sedoheptulose 7-phosphate isomerase compare
MMJJ_RS07440 +0.9 4.8 metallophosphoesterase compare
MMJJ_RS01860 +0.9 4.8 tRNA guanosine(15) transglycosylase TgtA compare
MMJJ_RS04415 +0.9 1.4 hypothetical protein compare
MMJJ_RS07585 +0.9 3.6 DHH family phosphoesterase compare
MMJJ_RS03070 +0.9 2.4 MetS family NSS transporter small subunit compare
MMJJ_RS01975 +0.9 3.7 diphthine synthase compare
MMJJ_RS06480 +0.9 3.6 hypothetical protein compare
MMJJ_RS01930 +0.8 3.4 Pre-mRNA processing ribonucleoprotein compare
MMJJ_RS08780 +0.8 3.3 D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase compare
MMJJ_RS07435 +0.8 5.2 SMC family ATPase compare
MMJJ_RS05160 +0.8 2.1 RNA-binding protein compare
MMJJ_RS07995 +0.8 2.6 molybdenum cofactor biosynthesis protein MoaE compare
MMJJ_RS09190 +0.8 0.8 tryptophan synthase subunit beta compare
MMJJ_RS09055 +0.8 3.1 NFACT family protein compare
MMJJ_RS08865 +0.8 4.0 class IV adenylate cyclase compare
MMJJ_RS09135 +0.7 2.5 archaeosine biosynthesis radical SAM protein RaSEA compare
MMJJ_RS06950 +0.7 4.6 4-demethylwyosine synthase TYW1 compare
MMJJ_RS09205 +0.7 1.9 hypothetical protein compare
MMJJ_RS06975 +0.7 1.8 protein translocase SEC61 complex subunit gamma compare
MMJJ_RS04580 +0.7 4.3 2-phosphosulfolactate phosphatase compare
MMJJ_RS05530 +0.7 2.2 roadblock/LC7 domain-containing protein compare
MMJJ_RS08730 +0.7 4.2 glycosyltransferase family 4 protein compare
MMJJ_RS01210 +0.7 1.1 hypothetical protein compare
MMJJ_RS05400 +0.7 2.4 CoA-binding protein compare
MMJJ_RS04515 +0.7 4.5 HD domain-containing protein compare
MMJJ_RS08630 +0.7 2.7 signal recognition particle subunit SRP19/SEC65 family protein compare
MMJJ_RS01300 +0.7 3.7 MarR family transcriptional regulator compare
MMJJ_RS06165 +0.7 3.2 archaeosine synthase subunit alpha compare
MMJJ_RS01270 +0.7 3.9 4Fe-4S binding protein compare
MMJJ_RS06650 +0.6 4.3 cell division protein FtsZ compare
MMJJ_RS03075 +0.6 3.5 sodium-dependent transporter compare
MMJJ_RS01350 +0.6 1.6 sodium:proton antiporter compare
MMJJ_RS01070 +0.6 1.1 PadR family transcriptional regulator compare
MMJJ_RS08405 +0.6 3.7 nickel-dependent hydrogenase large subunit compare
MMJJ_RS01745 +0.6 2.5 metal-dependent transcriptional regulator compare
MMJJ_RS05365 +0.6 3.0 DUF2798 domain-containing protein compare
MMJJ_RS07015 +0.6 0.6 PFL family protein compare
MMJJ_RS07775 +0.6 2.3 fluoride efflux transporter CrcB compare
MMJJ_RS02665 +0.6 1.3 methyl-accepting chemotaxis protein compare
MMJJ_RS02055 +0.6 3.1 GTP 3',8-cyclase MoaA compare
MMJJ_RS02905 +0.6 1.3 NifB/NifX family molybdenum-iron cluster-binding protein compare
MMJJ_RS04105 +0.6 4.2 prepilin peptidase compare
MMJJ_RS01530 +0.6 0.8 YwbE family protein compare
MMJJ_RS05820 +0.6 1.8 DUF2304 domain-containing protein compare
MMJJ_RS03410 +0.6 1.9 hypothetical protein compare
MMJJ_RS01825 +0.6 2.1 DNA repair and recombination protein RadB compare
MMJJ_RS07455 +0.6 1.9 coenzyme F420-reducing hydrogenase, FrhD protein compare
MMJJ_RS06035 +0.6 3.2 NADH-quinone oxidoreductase subunit B family protein compare
MMJJ_RS04955 +0.6 2.7 tRNA pseudouridine(54/55) synthase Pus10 compare
MMJJ_RS00415 +0.6 1.2 DedA family protein compare
MMJJ_RS04610 +0.6 2.7 ribosome assembly RNA-binding protein YhbY compare
MMJJ_RS01915 +0.6 2.7 precorrin-6A reductase compare
MMJJ_RS01090 +0.6 1.9 hypothetical protein compare
MMJJ_RS03905 +0.6 2.0 ATP-binding cassette domain-containing protein compare
MMJJ_RS06800 +0.6 2.3 prefoldin subunit alpha compare
MMJJ_RS08885 +0.6 3.1 cysteine--tRNA ligase compare
MMJJ_RS03540 +0.6 2.1 TIGR00289 family protein compare
MMJJ_RS05885 +0.5 4.1 tungstate ABC transporter substrate-binding protein WtpA compare
MMJJ_RS09230 +0.5 1.8 hypothetical protein compare
MMJJ_RS07450 +0.5 2.3 hypothetical protein compare
MMJJ_RS07030 +0.5 4.3 hypothetical protein compare
MMJJ_RS06455 +0.5 3.1 YeeE/YedE family protein compare
MMJJ_RS07740 +0.5 2.6 DUF2334 domain-containing protein compare
MMJJ_RS07765 +0.5 1.5 DMT family protein compare
MMJJ_RS07170 +0.5 1.6 pyridoxal phosphate-dependent aminotransferase compare
MMJJ_RS04215 +0.5 3.3 DMT family transporter compare
MMJJ_RS04345 +0.5 2.2 DUF2080 family transposase-associated protein compare
MMJJ_RS07965 +0.5 1.8 hypothetical protein compare
MMJJ_RS03775 +0.5 0.9 50S ribosomal protein L15e compare
MMJJ_RS03585 +0.5 0.4 methanogenesis marker 6 protein compare
MMJJ_RS04375 +0.5 1.2 hypothetical protein compare
MMJJ_RS03160 +0.5 2.8 winged helix-turn-helix transcriptional regulator compare
MMJJ_RS06575 +0.5 0.8 prephenate dehydrogenase compare
MMJJ_RS03995 +0.5 1.7 PHP domain-containing protein compare
MMJJ_RS00635 +0.5 3.0 ABC transporter permease subunit compare
MMJJ_RS06005 +0.5 2.5 energy conserving hydrogenase EhbF compare
MMJJ_RS06460 +0.5 2.2 cytochrome c compare
MMJJ_RS03175 +0.5 2.4 zinc metalloprotease HtpX compare
MMJJ_RS08235 +0.5 1.6 UPF0147 family protein compare
MMJJ_RS04450 +0.5 2.1 diphthamide biosynthesis enzyme Dph2 compare
MMJJ_RS01010 +0.5 4.1 right-handed parallel beta-helix repeat-containing protein compare
MMJJ_RS00420 +0.5 1.7 CBS domain-containing protein compare
MMJJ_RS04145 +0.5 2.0 glutamate-1-semialdehyde 2,1-aminomutase compare
MMJJ_RS04135 +0.5 1.5 7-cyano-7-deazaguanine synthase QueC compare
MMJJ_RS07810 +0.4 2.5 3-methyl-2-oxobutanoate dehydrogenase subunit VorB compare
MMJJ_RS06000 +0.4 1.4 cation:proton antiporter subunit C compare
MMJJ_RS06290 +0.4 2.2 DUF749 domain-containing protein compare
MMJJ_RS07010 +0.4 1.8 preprotein translocase subunit Sec61beta compare
MMJJ_RS04360 +0.4 1.2 winged helix-turn-helix transcriptional regulator compare
MMJJ_RS06025 +0.4 3.1 4Fe-4S binding protein compare
MMJJ_RS03510 +0.4 2.0 acyl-CoA dehydratase activase compare
MMJJ_RS00320 +0.4 1.8 chemotaxis protein CheD compare
MMJJ_RS09120 +0.4 0.6 aspartate kinase compare
MMJJ_RS04500 +0.4 2.4 hypothetical protein compare
MMJJ_RS03575 +0.4 1.7 NUDIX hydrolase compare
MMJJ_RS05660 +0.4 2.0 sulfopyruvate decarboxylase subunit beta compare
MMJJ_RS00180 +0.4 1.7 DNA topoisomerase I compare
MMJJ_RS07390 +0.4 2.4 TIGR04014 family B12-binding domain/radical SAM domain-containing protein compare
MMJJ_RS04825 +0.4 2.8 2,3-bisphosphoglycerate-independent phosphoglycerate mutase compare
MMJJ_RS08455 +0.4 1.3 tetratricopeptide repeat protein compare
MMJJ_RS07595 +0.4 1.4 hypothetical protein compare
MMJJ_RS04120 +0.4 1.6 amino acid ABC transporter ATP-binding protein compare
MMJJ_RS06710 +0.4 2.8 TldD/PmbA family protein compare
MMJJ_RS00480 +0.4 2.1 flippase compare
MMJJ_RS02120 +0.4 1.3 DJ-1/PfpI family protein compare
MMJJ_RS02340 +0.4 1.8 SAM-dependent methyltransferase compare
MMJJ_RS07260 +0.4 2.1 PspC domain-containing protein compare
MMJJ_RS05495 +0.4 1.9 MinD/ParA family protein compare
MMJJ_RS04775 +0.4 2.0 DNA-binding protein compare
MMJJ_RS05750 +0.4 2.3 flagellar accessory protein FlaH compare
MMJJ_RS04070 +0.4 3.1 DUF2341 domain-containing protein compare
MMJJ_RS03245 +0.4 0.4 UMP kinase compare
MMJJ_RS01785 +0.4 0.4 50S ribosomal protein L14e compare
MMJJ_RS09360 +0.4 2.3 hypothetical protein compare
MMJJ_RS05795 +0.4 2.8 hypothetical protein compare
MMJJ_RS08015 +0.4 1.7 HAD family hydrolase compare
MMJJ_RS05500 +0.4 3.0 hypothetical protein compare
MMJJ_RS07800 +0.4 2.6 AMP-binding protein compare
MMJJ_RS00615 +0.4 1.3 nucleoside deaminase compare
MMJJ_RS06505 +0.4 0.8 prephenate dehydratase compare
MMJJ_RS00305 +0.4 1.6 chemotaxis protein CheC compare
MMJJ_RS06085 +0.4 1.1 proteasome assembly chaperone family protein compare
MMJJ_RS08655 +0.4 2.3 phospholipase D-like domain-containing protein compare
MMJJ_RS05580 +0.4 1.6 methanogenesis marker 9 domain-containing protein compare
MMJJ_RS09225 +0.4 1.4 hypothetical protein compare
MMJJ_RS06010 +0.4 0.9 hypothetical protein compare
MMJJ_RS00885 +0.4 1.1 coenzyme F420-reducing hydrogenase, FrhD protein compare
MMJJ_RS09020 +0.4 1.1 hypothetical protein compare
MMJJ_RS03730 +0.4 1.5 SWIM zinc finger family protein compare
MMJJ_RS06500 +0.4 1.7 class I SAM-dependent methyltransferase compare
MMJJ_RS02160 +0.4 1.6 amino acid ABC transporter permease compare
MMJJ_RS07750 +0.3 1.2 class III signal peptide-containing protein compare
MMJJ_RS05915 +0.3 1.2 multiprotein bridging factor aMBF1 compare
MMJJ_RS04545 +0.3 0.7 PadR family transcriptional regulator compare
MMJJ_RS05740 +0.3 2.3 archaellar assembly protein FlaJ compare
MMJJ_RS01140 +0.3 1.3 helix-turn-helix domain-containing protein compare
MMJJ_RS00640 +0.3 2.1 glycine betaine ABC transporter substrate-binding protein compare
MMJJ_RS03370 +0.3 0.7 hypothetical protein compare
MMJJ_RS04240 +0.3 2.2 molybdate ABC transporter substrate-binding protein compare
MMJJ_RS09065 +0.3 1.5 hypothetical protein compare
MMJJ_RS08830 +0.3 0.6 hypothetical protein compare
MMJJ_RS01260 +0.3 1.8 hypothetical protein compare
MMJJ_RS05690 +0.3 2.8 hypothetical protein compare
MMJJ_RS07805 +0.3 1.2 ferredoxin family protein compare
MMJJ_RS07210 +0.3 2.0 AmmeMemoRadiSam system protein B compare
MMJJ_RS02270 +0.3 1.1 HEPN domain-containing protein compare
MMJJ_RS03850 +0.3 1.3 nucleoside-diphosphate kinase compare
MMJJ_RS08580 +0.3 1.1 YkgJ family cysteine cluster protein compare
MMJJ_RS09245 +0.3 1.4 hypothetical protein compare
MMJJ_RS06515 +0.3 2.0 ribonuclease III compare
MMJJ_RS03595 +0.3 1.2 hypothetical protein compare
MMJJ_RS05900 +0.3 2.0 ATP-binding cassette domain-containing protein compare
MMJJ_RS04725 +0.3 1.9 branched-chain-amino-acid transaminase compare
MMJJ_RS08905 +0.3 1.9 YcaO-related McrA-glycine thioamidation protein compare
MMJJ_RS02125 +0.3 0.9 hypothetical protein compare
MMJJ_RS02115 +0.3 1.7 class I SAM-dependent methyltransferase family protein compare
MMJJ_RS05975 +0.3 1.6 sulfurtransferase TusA family protein compare
MMJJ_RS05785 +0.3 1.9 flagellin compare
MMJJ_RS07270 +0.3 1.7 ribonuclease HII compare
MMJJ_RS04585 +0.3 1.5 phenylacetate--CoA ligase compare
MMJJ_RS03445 +0.3 1.3 hypothetical protein compare
MMJJ_RS08855 +0.3 0.9 cyclic pyranopterin monophosphate synthase MoaC compare
MMJJ_RS00405 +0.3 1.3 flavodoxin family protein compare
MMJJ_RS06125 +0.3 2.0 methanogenesis marker 16 metalloprotein compare
MMJJ_RS05745 +0.3 2.0 type II/IV secretion system ATPase subunit compare
MMJJ_RS08000 +0.3 2.0 HesA/MoeB/ThiF family protein compare
MMJJ_RS06540 +0.3 0.7 DUF2120 domain-containing protein compare


Specific Phenotypes

For 3 genes in this experiment

For stress Sodium nitrite in Methanococcus maripaludis JJ

For stress Sodium nitrite across organisms