Experiment set8S485 for Methanococcus maripaludis JJ

Compare to:

McCas_formate_complete no stress control

200 most important genes:

  gene name fitness t score description  
MMJJ_RS02040 -4.3 -1.6 Asp-tRNA(Asn) amidotransferase subunit GatC compare
MMJJ_RS00450 -3.7 -1.6 DUF126 domain-containing protein compare
MMJJ_RS00570 -3.4 -1.3 ribonuclease P compare
MMJJ_RS00040 -3.4 -10.4 CO dehydrogenase/acetyl-CoA synthase complex subunit epsilon compare
MMJJ_RS00050 -3.4 -12.1 AAA family ATPase compare
MMJJ_RS01865 -3.2 -5.7 peptidyl-tRNA hydrolase Pth2 compare
MMJJ_RS00055 -3.1 -10.9 CO dehydrogenase/acetyl-CoA synthase subunit delta compare
MMJJ_RS00210 -3.1 -1.5 DUF530 family protein compare
MMJJ_RS06875 -3.1 -2.0 hypothetical protein compare
MMJJ_RS03965 -3.1 -1.1 DNA-directed RNA polymerase subunit L compare
MMJJ_RS00060 -3.1 -17.5 acetyl-CoA decarbonylase/synthase complex subunit gamma compare
MMJJ_RS05535 -3.0 -12.2 hypothetical protein compare
MMJJ_RS00035 -3.0 -15.8 CO dehydrogenase/acetyl-CoA synthase complex subunit alpha compare
MMJJ_RS04475 -2.9 -3.8 3,4-dihydroxy-2-butanone-4-phosphate synthase compare
MMJJ_RS04485 -2.9 -6.8 riboflavin synthase compare
MMJJ_RS00045 -2.9 -15.6 CO dehydrogenase/CO-methylating acetyl-CoA synthase complex subunit beta compare
MMJJ_RS06750 -2.9 -1.4 homoaconitase large subunit compare
MMJJ_RS06910 -2.9 -2.6 energy-converting NiFe hydrogenase A subunit EhaA compare
MMJJ_RS06375 -2.9 -3.6 UbiX family flavin prenyltransferase compare
MMJJ_RS07470 -2.8 -1.6 50S ribosome-binding GTPase compare
MMJJ_RS06600 -2.8 -2.6 DUF555 domain-containing protein compare
MMJJ_RS06695 -2.7 -2.1 amidohydrolase compare
MMJJ_RS01360 -2.6 -1.3 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
MMJJ_RS08320 -2.6 -2.1 CDP-diacylglycerol--serine O-phosphatidyltransferase compare
MMJJ_RS05935 -2.6 -1.8 Era-like GTP-binding protein compare
MMJJ_RS05190 -2.6 -7.7 gamma carbonic anhydrase family protein compare
MMJJ_RS07000 -2.6 -1.5 TrkH family potassium uptake protein compare
MMJJ_RS04200 -2.6 -3.8 triphosphoribosyl-dephospho-CoA synthase compare
MMJJ_RS04800 -2.6 -4.4 2-phospho-L-lactate guanylyltransferase compare
MMJJ_RS00075 -2.6 -11.8 AAA family ATPase compare
MMJJ_RS06180 -2.5 -1.5 tryptophan--tRNA ligase compare
MMJJ_RS08625 -2.5 -5.0 magnesium/cobalt transporter CorA compare
MMJJ_RS07035 -2.5 -1.6 glycosyl transferase compare
MMJJ_RS08840 -2.5 -4.0 calcium/sodium antiporter compare
MMJJ_RS04730 -2.5 -2.6 tyrosine decarboxylase MfnA compare
MMJJ_RS00080 -2.5 -13.2 DUF166 domain-containing protein compare
MMJJ_RS00125 -2.4 -1.4 KEOPS complex subunit Cgi121 compare
MMJJ_RS05610 -2.4 -3.9 CDP-2,3-bis-(O-geranylgeranyl)-sn-glycerol synthase compare
MMJJ_RS00600 -2.4 -1.9 hydroxymethylbilane synthase compare
MMJJ_RS08575 -2.4 -3.1 hypothetical protein compare
MMJJ_RS09175 -2.4 -0.9 anthranilate synthase component I compare
MMJJ_RS06930 -2.4 -1.7 type II methionyl aminopeptidase compare
MMJJ_RS01810 -2.4 -1.3 methyl coenzyme M reductase system, component A2 compare
MMJJ_RS05770 -2.3 -2.3 flagellar protein D compare
MMJJ_RS03095 -2.3 -1.6 bifunctional N(6)-L-threonylcarbamoyladenine synthase/serine/threonine protein kinase compare
MMJJ_RS00355 -2.3 -2.5 ribonuclease P protein component 4 compare
MMJJ_RS00065 -2.3 -7.0 4Fe-4S dicluster domain-containing protein compare
MMJJ_RS05380 -2.3 -0.9 hypothetical protein compare
MMJJ_RS06915 -2.3 -12.1 helix-turn-helix domain-containing protein compare
MMJJ_RS07590 -2.3 -9.6 flap endonuclease-1 compare
MMJJ_RS04655 -2.3 -6.5 FAD-dependent oxidoreductase compare
MMJJ_RS06705 -2.2 -4.1 bifunctional NADP phosphatase/NAD kinase compare
MMJJ_RS06905 -2.2 -1.6 hypothetical protein compare
MMJJ_RS05720 -2.2 -1.7 glutamine--fructose-6-phosphate transaminase (isomerizing) compare
MMJJ_RS07425 -2.2 -9.3 MBL fold metallo-hydrolase compare
MMJJ_RS05070 -2.2 -1.0 DNA primase catalytic subunit PriS compare
MMJJ_RS07245 -2.2 -4.0 amidohydrolase family protein compare
MMJJ_RS00475 -2.2 -1.2 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase compare
MMJJ_RS07380 -2.1 -7.6 sulfide-dependent adenosine diphosphate thiazole synthase compare
MMJJ_RS07960 -2.1 -2.4 quinolinate synthase NadA compare
MMJJ_RS02200 -2.1 -7.2 chorismate pyruvate-lyase family protein compare
MMJJ_RS07950 -2.1 -2.0 4Fe-4S binding protein compare
MMJJ_RS06860 -2.1 -2.7 hypothetical protein compare
MMJJ_RS08500 -2.1 -6.1 L-sulfolactate dehydrogenase compare
MMJJ_RS03580 -2.1 -1.7 TIGR00303 family protein compare
MMJJ_RS01830 -2.1 -2.8 tRNA(Ile)(2)-agmatinylcytidine synthase compare
MMJJ_RS08010 -2.0 -6.1 phosphoadenosine phosphosulfate reductase family protein compare
MMJJ_RS02855 -2.0 -6.9 DEAD/DEAH box helicase compare
MMJJ_RS00270 -2.0 -1.7 adenosylcobinamide-GDP ribazoletransferase compare
MMJJ_RS00070 -2.0 -3.1 CooT family nickel-binding protein compare
MMJJ_RS01355 -2.0 -2.2 UDP-N-acetyl-D-mannosamine dehydrogenase compare
MMJJ_RS07705 -2.0 -2.1 GTP-binding protein EngB compare
MMJJ_RS05195 -2.0 -4.0 hypothetical protein compare
MMJJ_RS09375 -2.0 -1.1 hypothetical protein compare
MMJJ_RS05655 -2.0 -6.6 HisA/HisF family protein compare
MMJJ_RS05415 -2.0 -1.2 hypothetical protein compare
MMJJ_RS03920 -2.0 -12.6 nickel pincer cofactor biosynthesis protein LarC compare
MMJJ_RS03230 -1.9 -3.1 NAD(P)/FAD-dependent oxidoreductase compare
MMJJ_RS04180 -1.9 -2.3 metalloregulator ArsR/SmtB family transcription factor compare
MMJJ_RS04790 -1.9 -2.3 biotin--[acetyl-CoA-carboxylase] ligase compare
MMJJ_RS08130 -1.9 -0.9 translation initiation factor IF-2 subunit gamma compare
MMJJ_RS04685 -1.9 -5.8 carbamoyltransferase HypF compare
MMJJ_RS08330 -1.9 -1.9 SufD family Fe-S cluster assembly protein compare
MMJJ_RS04700 -1.9 -4.3 deoxyhypusine synthase compare
MMJJ_RS02090 -1.9 -3.4 tyramine--L-glutamate ligase compare
MMJJ_RS01415 -1.9 -1.3 beta-CASP ribonuclease aCPSF1 compare
MMJJ_RS07945 -1.9 -1.4 4Fe-4S binding protein compare
MMJJ_RS06660 -1.9 -7.1 DUF1188 domain-containing protein compare
MMJJ_RS08430 -1.9 -5.6 small nuclear ribonucleoprotein compare
MMJJ_RS01935 -1.9 -1.2 O-phosphoseryl-tRNA(Sec) selenium transferase compare
MMJJ_RS08535 -1.9 -2.8 NOL1/NOP2/sun family putative RNA methylase compare
MMJJ_RS05650 -1.9 -1.7 formylmethanofuran dehydrogenase subunit B compare
MMJJ_RS06175 -1.9 -1.4 DUF1743 domain-containing protein compare
MMJJ_RS01690 -1.9 -2.5 methanogenesis marker 12 protein compare
MMJJ_RS00935 -1.9 -9.7 nickel pincer cofactor biosynthesis protein LarB compare
MMJJ_RS05445 -1.8 -1.0 2-oxoacid:acceptor oxidoreductase subunit alpha compare
MMJJ_RS06250 -1.8 -1.4 nicotinamide-nucleotide adenylyltransferase compare
MMJJ_RS07415 -1.8 -1.9 polyprenyl diphosphate synthase compare
MMJJ_RS08080 -1.8 -7.4 TIGR00300 family protein compare
MMJJ_RS03310 -1.8 -2.3 hypothetical protein compare
MMJJ_RS05330 -1.8 -1.0 DNA polymerase II large subunit compare
MMJJ_RS03005 -1.8 -2.0 Ni-sirohydrochlorin a,c-diamide reductive cyclase catalytic subunit compare
MMJJ_RS03140 -1.8 -6.8 tRNA-dihydrouridine synthase compare
MMJJ_RS00580 -1.8 -1.2 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase subunit CofG compare
MMJJ_RS08020 -1.8 -6.2 nucleotidyltransferase domain-containing protein compare
MMJJ_RS06760 -1.8 -3.1 Ni-sirohydrochlorin a,c-diamide synthase compare
MMJJ_RS03815 -1.7 -0.7 nascent polypeptide-associated complex protein compare
MMJJ_RS07345 -1.7 -5.7 homocysteine biosynthesis protein compare
MMJJ_RS01765 -1.7 -6.1 winged helix-turn-helix domain-containing protein compare
MMJJ_RS06835 -1.7 -9.0 4Fe-4S binding protein compare
MMJJ_RS05560 -1.7 -3.7 30S ribosomal protein S27e compare
MMJJ_RS04050 -1.7 -0.8 dihydroneopterin aldolase family protein compare
MMJJ_RS07350 -1.7 -2.3 4Fe-4S binding protein compare
MMJJ_RS05170 -1.7 -7.2 Nif3-like dinuclear metal center hexameric protein compare
MMJJ_RS01755 -1.7 -1.3 ferrous iron transport protein B compare
MMJJ_RS03785 -1.7 -1.8 hypothetical protein compare
MMJJ_RS04150 -1.7 -1.9 DUF5379 domain-containing protein compare
MMJJ_RS06885 -1.7 -1.6 EhaF family protein compare
MMJJ_RS04750 -1.7 -6.5 5,10-methenyltetrahydromethanopterin hydrogenase compare
MMJJ_RS06110 -1.7 -1.7 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC compare
MMJJ_RS07190 -1.7 -3.0 RtcB family protein compare
MMJJ_RS06725 -1.7 -9.0 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMJJ_RS02045 -1.7 -1.6 molybdenum cofactor guanylyltransferase compare
MMJJ_RS06260 -1.6 -5.8 6-carboxyhexanoate--CoA ligase compare
MMJJ_RS03620 -1.6 -3.0 DUF2097 domain-containing protein compare
MMJJ_RS07155 -1.6 -6.5 [5-(aminomethyl)furan-3-yl]methyl phosphate kinase compare
MMJJ_RS01880 -1.6 -1.9 RlmE family RNA methyltransferase compare
MMJJ_RS05065 -1.6 -2.3 (4-{4-[2-(gamma-L- glutamylamino)ethyl]phenoxymethyl}furan-2-yl)methanamine synthase compare
MMJJ_RS04760 -1.6 -9.0 5,10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdC compare
MMJJ_RS03765 -1.6 -5.5 hypothetical protein compare
MMJJ_RS08620 -1.6 -3.1 DUF373 family protein compare
MMJJ_RS03225 -1.6 -1.9 4Fe-4S binding protein compare
MMJJ_RS08585 -1.6 -5.1 M42 family metallopeptidase compare
MMJJ_RS05575 -1.6 -2.2 2-amino-5-formylamino-6-ribosylaminopyrimidin- 4(3H)-one 5'-monophosphate deformylase compare
MMJJ_RS00645 -1.6 -7.2 adenosylmethionine--8-amino-7-oxononanoate transaminase compare
MMJJ_RS03875 -1.6 -2.0 CBS domain-containing protein compare
MMJJ_RS03190 -1.6 -1.7 phosphopyruvate hydratase compare
MMJJ_RS03930 -1.6 -7.4 hypothetical protein compare
MMJJ_RS04565 -1.5 -2.1 sirohydrochlorin nickelochelatase compare
MMJJ_RS06220 -1.5 -3.5 polyamine aminopropyltransferase compare
MMJJ_RS03810 -1.5 -2.4 AIR synthase-related protein compare
MMJJ_RS04755 -1.5 -5.7 5,10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdB compare
MMJJ_RS03150 -1.5 -3.8 2-phospho-L-lactate transferase compare
MMJJ_RS06270 -1.5 -6.1 dethiobiotin synthase compare
MMJJ_RS00215 -1.5 -1.5 CCA tRNA nucleotidyltransferase compare
MMJJ_RS07720 -1.5 -0.8 UPF0058 family protein compare
MMJJ_RS07430 -1.5 -2.1 ribonuclease VapC compare
MMJJ_RS00285 -1.5 -7.5 UPF0254 family protein compare
MMJJ_RS01345 -1.5 -3.7 (5-formylfuran-3-yl)methyl phosphate synthase compare
MMJJ_RS07955 -1.5 -5.6 ThiF family adenylyltransferase compare
MMJJ_RS01410 -1.5 -3.9 archaeal proteasome endopeptidase complex subunit beta compare
MMJJ_RS04980 -1.5 -3.1 bifunctional precorrin-2 dehydrogenase/sirohydrochlorin ferrochelatase compare
MMJJ_RS03200 -1.5 -1.2 uroporphyrinogen-III synthase compare
MMJJ_RS07160 -1.5 -10.1 M20 family metallo-hydrolase compare
MMJJ_RS06635 -1.5 -8.4 4Fe-4S binding protein compare
MMJJ_RS00550 -1.5 -5.3 AIR synthase-related protein compare
MMJJ_RS05360 -1.5 -4.6 nickel-responsive transcriptional regulator NikR compare
MMJJ_RS09035 -1.5 -2.4 OB-fold nucleic acid binding domain-containing protein compare
MMJJ_RS03110 -1.5 -2.7 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase compare
MMJJ_RS06840 -1.4 -1.6 nickel-dependent hydrogenase large subunit compare
MMJJ_RS00205 -1.4 -3.0 adenosylcobinamide-phosphate synthase CbiB compare
MMJJ_RS07975 -1.4 -5.4 ATP-dependent sacrificial sulfur transferase LarE compare
MMJJ_RS04010 -1.4 -5.6 archaeal proteasome endopeptidase complex subunit alpha compare
MMJJ_RS00480 -1.4 -8.0 flippase compare
MMJJ_RS05765 -1.4 -0.8 flagellar protein E compare
MMJJ_RS06390 -1.4 -1.1 NADPH-dependent F420 reductase compare
MMJJ_RS05155 -1.4 -3.0 5-amino-6-(D-ribitylamino)uracil--L-tyrosine 4-hydroxyphenyl transferase CofH compare
MMJJ_RS07980 -1.4 -7.0 biotin synthase BioB compare
MMJJ_RS07630 -1.4 -7.1 hypothetical protein compare
MMJJ_RS09085 -1.4 -7.8 minichromosome maintenance protein MCM compare
MMJJ_RS03670 -1.4 -2.5 precorrin-2 C(20)-methyltransferase compare
MMJJ_RS06010 -1.4 -3.0 hypothetical protein compare
MMJJ_RS03660 -1.4 -1.9 DUF447 family protein compare
MMJJ_RS03240 -1.4 -1.6 histone family protein compare
MMJJ_RS08190 -1.4 -2.5 hypothetical protein compare
MMJJ_RS06265 -1.4 -6.8 8-amino-7-oxononanoate synthase compare
MMJJ_RS09030 -1.4 -8.6 hypothetical protein compare
MMJJ_RS06255 -1.3 -4.1 tRNA uridine(34) 5-carboxymethylaminomethyl modification radical SAM/GNAT enzyme Elp3 compare
MMJJ_RS00275 -1.3 -0.8 coenzyme F420-0:L-glutamate ligase compare
MMJJ_RS07360 -1.3 -0.8 TIGR00269 family protein compare
MMJJ_RS03655 -1.3 -2.9 replication factor C large subunit compare
MMJJ_RS04770 -1.3 -2.2 formate-dependent phosphoribosylglycinamide formyltransferase compare
MMJJ_RS00370 -1.3 -0.8 asparagine synthase (glutamine-hydrolyzing) compare
MMJJ_RS05490 -1.3 -1.2 imidazole glycerol phosphate synthase subunit HisF compare
MMJJ_RS04155 -1.3 -3.3 hypothetical protein compare
MMJJ_RS04720 -1.3 -1.3 IMP dehydrogenase compare
MMJJ_RS08055 -1.3 -2.9 methanogenesis marker 14 protein compare
MMJJ_RS03115 -1.3 -3.3 sulfopyruvate decarboxylase subunit alpha compare
MMJJ_RS07370 -1.3 -2.5 tRNA 4-thiouridine(8) synthase ThiI compare
MMJJ_RS03125 -1.3 -2.5 GMC oxidoreductase compare
MMJJ_RS06215 -1.3 -3.0 agmatinase compare
MMJJ_RS06240 -1.3 -1.3 dihydropteroate synthase-like protein compare
MMJJ_RS08340 -1.2 -3.1 archaeoflavoprotein AfpA compare
MMJJ_RS05260 -1.2 -2.9 ATP-grasp domain-containing protein compare
MMJJ_RS08230 -1.2 -1.7 ribose-5-phosphate isomerase RpiA compare
MMJJ_RS01870 -1.2 -0.9 methanogenesis marker 15 protein compare
MMJJ_RS01925 -1.2 -4.5 fibrillarin-like rRNA/tRNA 2'-O-methyltransferase compare
MMJJ_RS07505 -1.2 -0.6 DNA-directed RNA polymerase subunit K compare
MMJJ_RS01750 -1.2 -1.1 ferrous iron transport protein A compare
MMJJ_RS06715 -1.2 -6.4 lactaldehyde dehydrogenase compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis JJ in no stress control experiments