Experiment set8S484 for Methanococcus maripaludis JJ

Compare to:

McCas_formate_complete no stress control

200 most important genes:

  gene name fitness t score description  
MMJJ_RS04475 -4.0 -2.5 3,4-dihydroxy-2-butanone-4-phosphate synthase compare
MMJJ_RS08320 -3.9 -1.8 CDP-diacylglycerol--serine O-phosphatidyltransferase compare
MMJJ_RS00450 -3.7 -1.5 DUF126 domain-containing protein compare
MMJJ_RS07960 -3.5 -2.5 quinolinate synthase NadA compare
MMJJ_RS00040 -3.4 -9.9 CO dehydrogenase/acetyl-CoA synthase complex subunit epsilon compare
MMJJ_RS06875 -3.4 -1.5 hypothetical protein compare
MMJJ_RS09375 -3.3 -1.2 hypothetical protein compare
MMJJ_RS05135 -3.2 -1.2 50S ribosomal protein L18Ae compare
MMJJ_RS00045 -3.2 -16.1 CO dehydrogenase/CO-methylating acetyl-CoA synthase complex subunit beta compare
MMJJ_RS08625 -3.1 -3.0 magnesium/cobalt transporter CorA compare
MMJJ_RS00070 -3.1 -3.0 CooT family nickel-binding protein compare
MMJJ_RS07000 -3.0 -1.2 TrkH family potassium uptake protein compare
MMJJ_RS08500 -3.0 -5.6 L-sulfolactate dehydrogenase compare
MMJJ_RS01690 -3.0 -2.6 methanogenesis marker 12 protein compare
MMJJ_RS00050 -3.0 -9.9 AAA family ATPase compare
MMJJ_RS05935 -2.9 -1.3 Era-like GTP-binding protein compare
MMJJ_RS00475 -2.9 -1.2 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase compare
MMJJ_RS04485 -2.9 -8.2 riboflavin synthase compare
MMJJ_RS00055 -2.9 -8.5 CO dehydrogenase/acetyl-CoA synthase subunit delta compare
MMJJ_RS04730 -2.9 -2.2 tyrosine decarboxylase MfnA compare
MMJJ_RS05535 -2.9 -11.9 hypothetical protein compare
MMJJ_RS07470 -2.9 -1.7 50S ribosome-binding GTPase compare
MMJJ_RS05360 -2.9 -6.8 nickel-responsive transcriptional regulator NikR compare
MMJJ_RS02200 -2.8 -6.0 chorismate pyruvate-lyase family protein compare
MMJJ_RS01865 -2.8 -6.4 peptidyl-tRNA hydrolase Pth2 compare
MMJJ_RS07715 -2.8 -3.1 UbiD family decarboxylase compare
MMJJ_RS04995 -2.8 -4.2 Tfx family DNA-binding protein compare
MMJJ_RS04700 -2.8 -3.8 deoxyhypusine synthase compare
MMJJ_RS06910 -2.8 -1.9 energy-converting NiFe hydrogenase A subunit EhaA compare
MMJJ_RS00035 -2.8 -16.0 CO dehydrogenase/acetyl-CoA synthase complex subunit alpha compare
MMJJ_RS00580 -2.8 -1.3 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase subunit CofG compare
MMJJ_RS00060 -2.8 -15.9 acetyl-CoA decarbonylase/synthase complex subunit gamma compare
MMJJ_RS06240 -2.7 -1.4 dihydropteroate synthase-like protein compare
MMJJ_RS05065 -2.7 -3.8 (4-{4-[2-(gamma-L- glutamylamino)ethyl]phenoxymethyl}furan-2-yl)methanamine synthase compare
MMJJ_RS00075 -2.7 -11.4 AAA family ATPase compare
MMJJ_RS07410 -2.7 -2.4 methanogenesis marker protein Mmp4/MtxX compare
MMJJ_RS06915 -2.6 -12.5 helix-turn-helix domain-containing protein compare
MMJJ_RS03270 -2.6 -1.7 ribosome biogenesis/translation initiation ATPase RLI compare
MMJJ_RS06725 -2.6 -10.2 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMJJ_RS08020 -2.6 -7.8 nucleotidyltransferase domain-containing protein compare
MMJJ_RS08340 -2.6 -4.7 archaeoflavoprotein AfpA compare
MMJJ_RS09035 -2.5 -4.8 OB-fold nucleic acid binding domain-containing protein compare
MMJJ_RS05765 -2.5 -0.7 flagellar protein E compare
MMJJ_RS08430 -2.5 -6.5 small nuclear ribonucleoprotein compare
MMJJ_RS00065 -2.5 -8.0 4Fe-4S dicluster domain-containing protein compare
MMJJ_RS03895 -2.5 -1.4 hydrogenase expression/formation protein HypE compare
MMJJ_RS00425 -2.5 -3.5 hypothetical protein compare
MMJJ_RS05190 -2.5 -6.5 gamma carbonic anhydrase family protein compare
MMJJ_RS03110 -2.5 -3.3 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase compare
MMJJ_RS04800 -2.4 -3.6 2-phospho-L-lactate guanylyltransferase compare
MMJJ_RS07945 -2.4 -1.3 4Fe-4S binding protein compare
MMJJ_RS01880 -2.4 -2.7 RlmE family RNA methyltransferase compare
MMJJ_RS06695 -2.4 -1.8 amidohydrolase compare
MMJJ_RS00080 -2.3 -11.0 DUF166 domain-containing protein compare
MMJJ_RS06905 -2.3 -1.3 hypothetical protein compare
MMJJ_RS04200 -2.3 -3.1 triphosphoribosyl-dephospho-CoA synthase compare
MMJJ_RS07350 -2.3 -2.2 4Fe-4S binding protein compare
MMJJ_RS02045 -2.3 -1.9 molybdenum cofactor guanylyltransferase compare
MMJJ_RS06835 -2.3 -10.1 4Fe-4S binding protein compare
MMJJ_RS03760 -2.3 -1.4 hydrogenase maturation nickel metallochaperone HypA compare
MMJJ_RS05445 -2.3 -0.9 2-oxoacid:acceptor oxidoreductase subunit alpha compare
MMJJ_RS02040 -2.3 -1.5 Asp-tRNA(Asn) amidotransferase subunit GatC compare
MMJJ_RS05770 -2.3 -2.0 flagellar protein D compare
MMJJ_RS05590 -2.3 -1.8 homoserine dehydrogenase compare
MMJJ_RS05195 -2.2 -6.3 hypothetical protein compare
MMJJ_RS03920 -2.2 -13.3 nickel pincer cofactor biosynthesis protein LarC compare
MMJJ_RS08010 -2.2 -5.9 phosphoadenosine phosphosulfate reductase family protein compare
MMJJ_RS05415 -2.2 -1.0 hypothetical protein compare
MMJJ_RS00570 -2.2 -1.1 ribonuclease P compare
MMJJ_RS08080 -2.2 -8.2 TIGR00300 family protein compare
MMJJ_RS04685 -2.1 -5.2 carbamoyltransferase HypF compare
MMJJ_RS00355 -2.1 -2.2 ribonuclease P protein component 4 compare
MMJJ_RS06180 -2.1 -1.7 tryptophan--tRNA ligase compare
MMJJ_RS07155 -2.1 -7.9 [5-(aminomethyl)furan-3-yl]methyl phosphate kinase compare
MMJJ_RS03200 -2.1 -1.3 uroporphyrinogen-III synthase compare
MMJJ_RS08535 -2.1 -2.8 NOL1/NOP2/sun family putative RNA methylase compare
MMJJ_RS05610 -2.1 -3.3 CDP-2,3-bis-(O-geranylgeranyl)-sn-glycerol synthase compare
MMJJ_RS00125 -2.1 -1.6 KEOPS complex subunit Cgi121 compare
MMJJ_RS00645 -2.1 -9.2 adenosylmethionine--8-amino-7-oxononanoate transaminase compare
MMJJ_RS07950 -2.1 -2.0 4Fe-4S binding protein compare
MMJJ_RS03810 -2.1 -2.6 AIR synthase-related protein compare
MMJJ_RS01360 -2.1 -1.4 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
MMJJ_RS02090 -2.1 -3.8 tyramine--L-glutamate ligase compare
MMJJ_RS07955 -2.1 -7.9 ThiF family adenylyltransferase compare
MMJJ_RS01415 -2.1 -1.0 beta-CASP ribonuclease aCPSF1 compare
MMJJ_RS00210 -2.0 -1.5 DUF530 family protein compare
MMJJ_RS05070 -2.0 -0.9 DNA primase catalytic subunit PriS compare
MMJJ_RS07245 -2.0 -3.9 amidohydrolase family protein compare
MMJJ_RS05720 -2.0 -1.7 glutamine--fructose-6-phosphate transaminase (isomerizing) compare
MMJJ_RS08855 -2.0 -3.5 cyclic pyranopterin monophosphate synthase MoaC compare
MMJJ_RS03095 -2.0 -1.6 bifunctional N(6)-L-threonylcarbamoyladenine synthase/serine/threonine protein kinase compare
MMJJ_RS04770 -2.0 -2.7 formate-dependent phosphoribosylglycinamide formyltransferase compare
MMJJ_RS05490 -2.0 -1.1 imidazole glycerol phosphate synthase subunit HisF compare
MMJJ_RS08840 -1.9 -3.5 calcium/sodium antiporter compare
MMJJ_RS00215 -1.9 -1.5 CCA tRNA nucleotidyltransferase compare
MMJJ_RS07705 -1.9 -2.0 GTP-binding protein EngB compare
MMJJ_RS04595 -1.9 -3.4 hypothetical protein compare
MMJJ_RS05810 -1.9 -4.2 precorrin-4 C(11)-methyltransferase compare
MMJJ_RS07415 -1.9 -2.2 polyprenyl diphosphate synthase compare
MMJJ_RS06750 -1.9 -1.2 homoaconitase large subunit compare
MMJJ_RS05650 -1.9 -1.4 formylmethanofuran dehydrogenase subunit B compare
MMJJ_RS08190 -1.9 -3.3 hypothetical protein compare
MMJJ_RS07980 -1.8 -8.4 biotin synthase BioB compare
MMJJ_RS00550 -1.8 -8.3 AIR synthase-related protein compare
MMJJ_RS04760 -1.8 -10.4 5,10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdC compare
MMJJ_RS08035 -1.8 -5.5 cobalt-precorrin-7 (C(5))-methyltransferase compare
MMJJ_RS07345 -1.8 -5.6 homocysteine biosynthesis protein compare
MMJJ_RS05575 -1.8 -2.7 2-amino-5-formylamino-6-ribosylaminopyrimidin- 4(3H)-one 5'-monophosphate deformylase compare
MMJJ_RS00285 -1.8 -8.9 UPF0254 family protein compare
MMJJ_RS02935 -1.8 -2.1 DNA-directed RNA polymerase subunit E'' compare
MMJJ_RS01765 -1.8 -6.7 winged helix-turn-helix domain-containing protein compare
MMJJ_RS04720 -1.8 -1.5 IMP dehydrogenase compare
MMJJ_RS00265 -1.8 -5.4 TIGR02253 family HAD-type hydrolase compare
MMJJ_RS01405 -1.8 -1.0 proline--tRNA ligase compare
MMJJ_RS00275 -1.8 -0.8 coenzyme F420-0:L-glutamate ligase compare
MMJJ_RS07380 -1.8 -6.6 sulfide-dependent adenosine diphosphate thiazole synthase compare
MMJJ_RS09120 -1.8 -1.2 aspartate kinase compare
MMJJ_RS06860 -1.8 -2.4 hypothetical protein compare
MMJJ_RS07035 -1.8 -1.3 glycosyl transferase compare
MMJJ_RS03230 -1.8 -2.9 NAD(P)/FAD-dependent oxidoreductase compare
MMJJ_RS05655 -1.7 -6.1 HisA/HisF family protein compare
MMJJ_RS07160 -1.7 -12.6 M20 family metallo-hydrolase compare
MMJJ_RS09175 -1.7 -0.7 anthranilate synthase component I compare
MMJJ_RS03170 -1.7 -5.1 DUF5612 domain-containing protein compare
MMJJ_RS04655 -1.7 -4.6 FAD-dependent oxidoreductase compare
MMJJ_RS00935 -1.7 -7.6 nickel pincer cofactor biosynthesis protein LarB compare
MMJJ_RS05155 -1.7 -3.7 5-amino-6-(D-ribitylamino)uracil--L-tyrosine 4-hydroxyphenyl transferase CofH compare
MMJJ_RS07430 -1.7 -2.4 ribonuclease VapC compare
MMJJ_RS05260 -1.7 -3.0 ATP-grasp domain-containing protein compare
MMJJ_RS04750 -1.7 -6.9 5,10-methenyltetrahydromethanopterin hydrogenase compare
MMJJ_RS04875 -1.7 -0.9 tRNA-Lys compare
MMJJ_RS02055 -1.7 -9.3 GTP 3',8-cyclase MoaA compare
MMJJ_RS03670 -1.7 -2.6 precorrin-2 C(20)-methyltransferase compare
MMJJ_RS05330 -1.7 -0.9 DNA polymerase II large subunit compare
MMJJ_RS01600 -1.7 -0.9 radical SAM protein compare
MMJJ_RS03875 -1.7 -1.9 CBS domain-containing protein compare
MMJJ_RS04755 -1.7 -6.2 5,10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdB compare
MMJJ_RS08000 -1.7 -8.7 HesA/MoeB/ThiF family protein compare
MMJJ_RS03660 -1.7 -1.6 DUF447 family protein compare
MMJJ_RS03655 -1.7 -4.9 replication factor C large subunit compare
MMJJ_RS04870 -1.6 -1.2 tRNA-Asp compare
MMJJ_RS07720 -1.6 -0.9 UPF0058 family protein compare
MMJJ_RS03490 -1.6 -1.2 ribonuclease VapC compare
MMJJ_RS08025 -1.6 -4.2 hypothetical protein compare
MMJJ_RS03815 -1.6 -0.7 nascent polypeptide-associated complex protein compare
MMJJ_RS07275 -1.6 -1.4 formate--phosphoribosylaminoimidazolecarboxamide ligase compare
MMJJ_RS03140 -1.6 -6.4 tRNA-dihydrouridine synthase compare
MMJJ_RS03055 -1.6 -1.9 hypothetical protein compare
MMJJ_RS06270 -1.6 -6.1 dethiobiotin synthase compare
MMJJ_RS03615 -1.6 -1.5 cobalt-precorrin-8 methylmutase compare
MMJJ_RS03930 -1.6 -7.7 hypothetical protein compare
MMJJ_RS00270 -1.6 -1.5 adenosylcobinamide-GDP ribazoletransferase compare
MMJJ_RS03310 -1.6 -2.2 hypothetical protein compare
MMJJ_RS07425 -1.6 -6.4 MBL fold metallo-hydrolase compare
MMJJ_RS01410 -1.6 -4.4 archaeal proteasome endopeptidase complex subunit beta compare
MMJJ_RS05780 -1.6 -1.7 flagellin compare
MMJJ_RS05170 -1.6 -6.1 Nif3-like dinuclear metal center hexameric protein compare
MMJJ_RS04565 -1.6 -2.2 sirohydrochlorin nickelochelatase compare
MMJJ_RS06260 -1.6 -4.1 6-carboxyhexanoate--CoA ligase compare
MMJJ_RS04615 -1.6 -3.3 methanogenesis marker 3 protein compare
MMJJ_RS06510 -1.6 -0.8 LL-diaminopimelate aminotransferase compare
MMJJ_RS02205 -1.5 -7.8 hypothetical protein compare
MMJJ_RS06485 -1.5 -0.9 phosphoglycerate kinase compare
MMJJ_RS06390 -1.5 -0.8 NADPH-dependent F420 reductase compare
MMJJ_RS08060 -1.5 -6.5 DNA repair and recombination protein RadA compare
MMJJ_RS06665 -1.5 -4.9 DUF3236 domain-containing protein compare
MMJJ_RS01870 -1.5 -0.9 methanogenesis marker 15 protein compare
MMJJ_RS07190 -1.5 -3.0 RtcB family protein compare
MMJJ_RS06040 -1.5 -1.7 NADH-quinone oxidoreductase subunit H compare
MMJJ_RS03785 -1.5 -1.8 hypothetical protein compare
MMJJ_RS08585 -1.5 -4.7 M42 family metallopeptidase compare
MMJJ_RS03765 -1.5 -4.5 hypothetical protein compare
MMJJ_RS02855 -1.5 -5.4 DEAD/DEAH box helicase compare
MMJJ_RS09085 -1.5 -7.7 minichromosome maintenance protein MCM compare
MMJJ_RS08250 -1.5 -3.3 hydrogenase maturation peptidase HycI compare
MMJJ_RS06010 -1.5 -3.4 hypothetical protein compare
MMJJ_RS05280 -1.5 -0.8 hypothetical protein compare
MMJJ_RS06660 -1.5 -5.5 DUF1188 domain-containing protein compare
MMJJ_RS06635 -1.5 -7.6 4Fe-4S binding protein compare
MMJJ_RS04180 -1.5 -1.5 metalloregulator ArsR/SmtB family transcription factor compare
MMJJ_RS01925 -1.4 -5.4 fibrillarin-like rRNA/tRNA 2'-O-methyltransferase compare
MMJJ_RS08660 -1.4 -1.9 acetylornithine transaminase compare
MMJJ_RS06225 -1.4 -1.2 adenosylmethionine decarboxylase compare
MMJJ_RS03155 -1.4 -6.2 hypothetical protein compare
MMJJ_RS03350 -1.4 -1.7 hypothetical protein compare
MMJJ_RS04150 -1.4 -1.6 DUF5379 domain-containing protein compare
MMJJ_RS03005 -1.4 -1.8 Ni-sirohydrochlorin a,c-diamide reductive cyclase catalytic subunit compare
MMJJ_RS06265 -1.4 -7.6 8-amino-7-oxononanoate synthase compare
MMJJ_RS07355 -1.4 -3.9 MoaD/ThiS family protein compare
MMJJ_RS07590 -1.4 -6.2 flap endonuclease-1 compare
MMJJ_RS07995 -1.4 -4.0 molybdenum cofactor biosynthesis protein MoaE compare
MMJJ_RS03065 -1.4 -7.8 CBS domain-containing protein compare
MMJJ_RS03225 -1.4 -1.7 4Fe-4S binding protein compare
MMJJ_RS08810 -1.4 -0.6 DUF4040 domain-containing protein compare
MMJJ_RS08095 -1.4 -2.3 cobyric acid synthase CobQ compare
MMJJ_RS00345 -1.4 -5.0 4-hydroxy-tetrahydrodipicolinate reductase compare
MMJJ_RS03115 -1.4 -2.7 sulfopyruvate decarboxylase subunit alpha compare
MMJJ_RS04520 -1.4 -3.0 coenzyme F430 synthase compare
MMJJ_RS07975 -1.3 -4.7 ATP-dependent sacrificial sulfur transferase LarE compare
MMJJ_RS08130 -1.3 -0.7 translation initiation factor IF-2 subunit gamma compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis JJ in no stress control experiments