Experiment set8IT093 for Pseudomonas fluorescens SBW25-INTG

Compare to:

N-Acetyl-D-Glucosamine carbon source

200 most important genes:

  gene name fitness t score description  
PFLU_RS01900 -5.5 -9.2 phosphoribosyl-AMP cyclohydrolase compare
PFLU_RS24645 -5.4 -15.6 N-acetylglucosamine-6-phosphate deacetylase conserved
PFLU_RS25815 -5.3 -3.5 transcription termination/antitermination protein NusA compare
PFLU_RS29880 -5.2 -15.8 acetyl-CoA carboxylase biotin carboxylase subunit compare
PFLU_RS24655 -5.2 -12.2 phosphoenolpyruvate--protein phosphotransferase conserved
PFLU_RS02590 -5.1 -11.4 ATP phosphoribosyltransferase regulatory subunit compare
PFLU_RS24650 -5.0 -15.9 SIS domain-containing protein conserved
PFLU_RS01605 -4.9 -13.1 imidazoleglycerol-phosphate dehydratase HisB compare
PFLU_RS01620 -4.9 -12.3 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase compare
PFLU_RS06055 -4.8 -2.6 chemotaxis response regulator protein-glutamate methylesterase compare
PFLU_RS20565 -4.8 -19.0 3-isopropylmalate dehydrogenase compare
PFLU_RS28165 -4.7 -18.1 methylenetetrahydrofolate reductase [NAD(P)H] compare
PFLU_RS28535 -4.7 -21.6 dihydroxy-acid dehydratase compare
PFLU_RS25760 -4.7 -16.3 glucose-6-phosphate isomerase compare
PFLU_RS25645 -4.6 -4.5 acetolactate synthase small subunit compare
PFLU_RS20540 -4.6 -16.5 phosphoribosylanthranilate isomerase compare
PFLU_RS12975 -4.6 -6.2 DUF934 domain-containing protein compare
PFLU_RS29875 -4.6 -19.8 oxaloacetate decarboxylase subunit alpha compare
PFLU_RS25640 -4.5 -18.5 ketol-acid reductoisomerase compare
PFLU_RS13540 -4.5 -7.5 3-phosphoshikimate 1-carboxyvinyltransferase compare
PFLU_RS00175 -4.5 -14.6 tryptophan synthase subunit alpha compare
PFLU_RS27370 -4.5 -16.9 anthranilate phosphoribosyltransferase compare
PFLU_RS01320 -4.4 -13.2 phosphoenolpyruvate carboxykinase compare
PFLU_RS24660 -4.4 -20.8 PTS transporter subunit IIBC conserved
PFLU_RS20580 -4.3 -17.7 3-isopropylmalate dehydratase large subunit compare
PFLU_RS04465 -4.3 -13.0 ATP phosphoribosyltransferase compare
PFLU_RS12980 -4.3 -12.4 nitrite/sulfite reductase compare
PFLU_RS24640 -4.3 -12.9 GntR family transcriptional regulator conserved
PFLU_RS25735 -4.2 -11.6 sigma-54-dependent Fis family transcriptional regulator compare
PFLU_RS27365 -4.2 -10.9 indole-3-glycerol phosphate synthase TrpC compare
PFLU_RS04470 -4.2 -17.1 histidinol dehydrogenase compare
PFLU_RS15410 -4.1 -4.9 zinc-dependent alcohol dehydrogenase family protein compare
PFLU_RS24330 -4.1 -11.8 phosphogluconate dehydratase compare
PFLU_RS04385 -4.1 -14.2 RNase adapter RapZ compare
PFLU_RS18505 -4.1 -15.1 uroporphyrinogen-III C-methyltransferase compare
PFLU_RS02490 -4.1 -14.9 phosphoserine phosphatase SerB compare
PFLU_RS29095 -4.0 -23.9 polyphosphate kinase 1 compare
PFLU_RS24765 -4.0 -23.8 2-isopropylmalate synthase compare
PFLU_RS01610 -4.0 -16.1 imidazole glycerol phosphate synthase subunit HisH compare
PFLU_RS12580 -4.0 -11.8 MurR/RpiR family transcriptional regulator compare
PFLU_RS18550 -3.9 -13.0 ATP-dependent Clp protease ATP-binding subunit ClpA compare
PFLU_RS25595 -3.9 -5.9 exodeoxyribonuclease V subunit gamma compare
PFLU_RS29885 -3.9 -11.1 LysR family transcriptional regulator compare
PFLU_RS27475 -3.9 -13.8 symmetrical bis(5'-nucleosyl)-tetraphosphatase compare
PFLU_RS28385 -3.9 -15.4 homoserine O-acetyltransferase compare
PFLU_RS16935 -3.9 -4.4 CoA ester lyase compare
PFLU_RS00180 -3.8 -10.9 tryptophan synthase subunit beta compare
PFLU_RS20510 -3.8 -16.4 O-succinylhomoserine sulfhydrylase compare
PFLU_RS03765 -3.8 -11.9 sulfate adenylyltransferase subunit CysD compare
PFLU_RS23725 -3.8 -17.0 glucose-6-phosphate dehydrogenase compare
PFLU_RS02565 -3.7 -12.3 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA compare
PFLU_RS24335 -3.7 -16.0 type I glyceraldehyde-3-phosphate dehydrogenase compare
PFLU_RS19170 -3.7 -6.7 ATP-dependent Clp endopeptidase proteolytic subunit ClpP compare
PFLU_RS25360 -3.6 -8.0 glutamate 5-kinase compare
PFLU_RS28390 -3.6 -11.5 methionine biosynthesis protein MetW compare
PFLU_RS08155 -3.6 -6.2 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
PFLU_RS19160 -3.5 -16.6 endopeptidase La compare
PFLU_RS18940 -3.5 -13.1 acyl-CoA dehydrogenase compare
PFLU_RS28695 -3.5 -8.2 phosphoglycerate dehydrogenase compare
PFLU_RS29215 -3.5 -12.2 response regulator transcription factor compare
PFLU_RS25585 -3.4 -5.9 exodeoxyribonuclease V subunit alpha compare
PFLU_RS20575 -3.4 -5.3 3-isopropylmalate dehydratase small subunit compare
PFLU_RS22520 -3.4 -4.6 GntR family transcriptional regulator compare
PFLU_RS19165 -3.3 -7.5 ATP-dependent Clp protease ATP-binding subunit ClpX compare
PFLU_RS18755 -3.3 -8.5 TetR/AcrR family transcriptional regulator compare
PFLU_RS07805 -3.3 -17.2 transaldolase compare
PFLU_RS09575 -3.3 -5.6 FadR family transcriptional regulator compare
PFLU_RS28965 -3.2 -10.7 5-formyltetrahydrofolate cyclo-ligase compare
PFLU_RS25305 -3.2 -9.7 dihydromonapterin reductase compare
PFLU_RS03770 -3.2 -13.1 sulfate adenylyltransferase subunit CysN compare
PFLU_RS22740 -3.2 -8.1 phosphoadenylyl-sulfate reductase compare
PFLU_RS00415 -3.2 -4.7 thiol:disulfide interchange protein DsbA/DsbL compare
PFLU_RS08505 -3.1 -9.5 protease HtpX compare
PFLU_RS15065 -3.1 -5.5 IclR family transcriptional regulator compare
PFLU_RS20290 -3.1 -2.1 integration host factor subunit alpha compare
PFLU_RS18740 -3.0 -6.2 Dyp-type peroxidase conserved
PFLU_RS24205 -3.0 -3.5 DNA binding protein compare
PFLU_RS08445 -3.0 -10.7 MarR family transcriptional regulator compare
PFLU_RS22105 -2.9 -6.5 cysteine synthase CysM compare
PFLU_RS22595 -2.9 -4.7 OmpA family protein compare
PFLU_RS28645 -2.9 -11.5 phosphoenolpyruvate--protein phosphotransferase compare
PFLU_RS23380 -2.9 -3.8 HAD-IB family hydrolase compare
PFLU_RS04220 -2.9 -9.3 FadR family transcriptional regulator compare
PFLU_RS03970 -2.8 -9.8 carboxylating nicotinate-nucleotide diphosphorylase compare
PFLU_RS24860 -2.8 -3.6 Fe-S cluster assembly transcriptional regulator IscR compare
PFLU_RS28655 -2.8 -14.0 HAD family hydrolase compare
PFLU_RS24085 -2.8 -6.5 Holliday junction branch migration DNA helicase RuvB compare
PFLU_RS25730 -2.8 -15.8 PAS domain S-box protein compare
PFLU_RS01765 -2.8 -8.6 histidine utilization repressor compare
PFLU_RS09055 -2.7 -7.7 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase compare
PFLU_RS11525 -2.7 -4.1 GntR family transcriptional regulator compare
PFLU_RS01625 -2.7 -4.6 imidazole glycerol phosphate synthase subunit HisF compare
PFLU_RS29785 -2.7 -13.9 D-hexose-6-phosphate mutarotase conserved
PFLU_RS26735 -2.7 -9.6 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase compare
PFLU_RS25875 -2.7 -5.5 transcription elongation factor GreA compare
PFLU_RS27440 -2.7 -6.8 nucleotidyltransferase family protein compare
PFLU_RS23310 -2.7 -11.0 arginine/ornithine succinyltransferase subunit alpha compare
PFLU_RS22195 -2.6 -4.2 DEAD/DEAH box helicase compare
PFLU_RS20515 -2.6 -6.9 amidophosphoribosyltransferase compare
PFLU_RS19015 -2.6 -7.3 anti-sigma factor compare
PFLU_RS01895 -2.6 -5.8 phosphoribosyl-ATP diphosphatase compare
PFLU_RS28270 -2.6 -2.3 triphosphoribosyl-dephospho-CoA synthase compare
PFLU_RS25800 -2.6 -9.4 tRNA pseudouridine(55) synthase TruB compare
PFLU_RS13475 -2.5 -12.3 alpha-1,4-glucan--maltose-1-phosphate maltosyltransferase compare
PFLU_RS25315 -2.5 -5.2 dihydroneopterin triphosphate 2'-epimerase compare
PFLU_RS22630 -2.5 -13.8 phosphoenolpyruvate synthase compare
PFLU_RS18670 -2.4 -3.1 NADH-quinone oxidoreductase subunit M compare
PFLU_RS17060 -2.4 -1.9 monooxygenase compare
PFLU_RS07725 -2.4 -5.7 Si-specific NAD(P)(+) transhydrogenase compare
PFLU_RS18635 -2.4 -4.7 NADH-quinone oxidoreductase subunit NuoF compare
PFLU_RS01955 -2.3 -7.5 DUF971 domain-containing protein compare
PFLU_RS24710 -2.3 -8.9 alpha,alpha-phosphotrehalase compare
PFLU_RS08125 -2.3 -3.1 integration host factor subunit beta compare
PFLU_RS04325 -2.3 -13.5 ribonuclease G compare
PFLU_RS07275 -2.3 -3.9 4-hydroxy-tetrahydrodipicolinate synthase compare
PFLU_RS07665 -2.3 -3.4 type I DNA topoisomerase compare
PFLU_RS22070 -2.3 -5.4 phosphoribosylglycinamide formyltransferase compare
PFLU_RS21495 -2.2 -4.1 TlpA family protein disulfide reductase compare
PFLU_RS02115 -2.2 -3.6 outer membrane lipoprotein carrier protein LolA compare
PFLU_RS02275 -2.2 -4.1 pyruvate dehydrogenase (acetyl-transferring), homodimeric type compare
PFLU_RS30160 -2.2 -2.9 ParB/RepB/Spo0J family partition protein compare
PFLU_RS13485 -2.2 -11.9 1,4-alpha-glucan branching protein GlgB compare
PFLU_RS18665 -2.2 -5.1 NADH-quinone oxidoreductase subunit L compare
PFLU_RS05235 -2.2 -8.1 leucyl aminopeptidase compare
PFLU_RS08065 -2.2 -7.6 N-acetylmuramic acid 6-phosphate phosphatase MupP compare
PFLU_RS18645 -2.1 -3.1 NADH-quinone oxidoreductase subunit NuoH compare
PFLU_RS24120 -2.1 -14.6 DNA starvation/stationary phase protection protein conserved
PFLU_RS18530 -2.0 -4.5 DNA translocase FtsK compare
PFLU_RS18625 -2.0 -8.4 NADH-quinone oxidoreductase subunit C/D compare
PFLU_RS05885 -2.0 -5.8 recombinase RecA compare
PFLU_RS04655 -2.0 -5.9 16S rRNA (cytidine(1402)-2'-O)-methyltransferase compare
PFLU_RS12040 -2.0 -6.9 divalent metal cation transporter conserved
PFLU_RS31490 -2.0 -1.7 hypothetical protein compare
PFLU_RS21740 -1.9 -5.8 Hpt domain-containing protein compare
PFLU_RS18555 -1.9 -6.5 ATP-dependent Clp protease adapter ClpS compare
PFLU_RS30165 -1.9 -7.9 ParA family protein compare
PFLU_RS28665 -1.9 -11.1 threonine ammonia-lyase, biosynthetic compare
PFLU_RS18640 -1.9 -4.3 NADH-quinone oxidoreductase subunit NuoG compare
PFLU_RS23285 -1.9 -7.2 succinylglutamate desuccinylase compare
PFLU_RS23890 -1.9 -3.9 pseudouridine synthase compare
PFLU_RS30470 -1.9 -1.9 addiction module antidote protein compare
PFLU_RS04435 -1.8 -6.0 lipid asymmetry maintenance ABC transporter permease subunit MlaE compare
PFLU_RS27420 -1.8 -3.1 response regulator transcription factor compare
PFLU_RS05590 -1.8 -6.1 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme compare
PFLU_RS12660 -1.8 -5.3 hypothetical protein compare
PFLU_RS29310 -1.8 -1.6 accessory factor UbiK family protein compare
PFLU_RS04445 -1.8 -5.8 ABC transporter substrate-binding protein compare
PFLU_RS19120 -1.8 -3.4 MarR family transcriptional regulator compare
PFLU_RS07520 -1.8 -1.5 hypothetical protein compare
PFLU_RS27465 -1.8 -4.2 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA compare
PFLU_RS08380 -1.8 -6.7 3-deoxy-7-phosphoheptulonate synthase compare
PFLU_RS10430 -1.7 -2.4 peptidase compare
PFLU_RS08160 -1.7 -6.6 sugar transferase compare
PFLU_RS08410 -1.7 -4.5 HTH-type transcriptional regulator CysB compare
PFLU_RS20405 -1.7 -4.1 carbon storage regulator CsrA compare
PFLU_RS12815 -1.7 -6.3 amino acid deaminase conserved
PFLU_RS24025 -1.7 -7.5 quinolinate synthase NadA compare
PFLU_RS25715 -1.7 -8.0 RNA polymerase-binding protein DksA compare
PFLU_RS11620 -1.6 -6.9 FadR family transcriptional regulator compare
PFLU_RS01965 -1.6 -2.2 ATP-dependent protease subunit HslV compare
PFLU_RS29545 -1.6 -7.5 hydrogen peroxide-inducible genes activator compare
PFLU_RS04715 -1.6 -3.5 D-alanine--D-alanine ligase compare
PFLU_RS05250 -1.6 -4.2 elongation factor 4 compare
PFLU_RS07755 -1.6 -5.0 heavy metal sensor histidine kinase compare
PFLU_RS22680 -1.5 -8.0 Fe/S-dependent 2-methylisocitrate dehydratase AcnD compare
PFLU_RS04430 -1.5 -6.8 ATP-binding cassette domain-containing protein compare
PFLU_RS27380 -1.5 -8.3 anthranilate synthase component I compare
PFLU_RS09305 -1.5 -8.6 hypothetical protein compare
PFLU_RS24090 -1.5 -4.1 Holliday junction branch migration protein RuvA compare
PFLU_RS05630 -1.5 -1.5 amino acid ABC transporter ATP-binding protein compare
PFLU_RS22665 -1.5 -3.3 alanyl-tRNA editing protein compare
PFLU_RS28415 -1.5 -5.4 tRNA (guanosine(46)-N7)-methyltransferase TrmB compare
PFLU_RS28785 -1.5 -7.3 glutamine synthetase compare
PFLU_RS02280 -1.4 -8.0 bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase compare
PFLU_RS20625 -1.4 -3.1 TetR/AcrR family transcriptional regulator compare
PFLU_RS07785 -1.4 -7.9 VacJ family lipoprotein compare
PFLU_RS28315 -1.4 -1.0 response regulator compare
PFLU_RS02670 -1.4 -3.7 hypothetical protein compare
PFLU_RS12795 -1.4 -6.0 amino acid ABC transporter permease conserved
PFLU_RS15610 -1.4 -3.5 helix-turn-helix transcriptional regulator compare
PFLU_RS18675 -1.4 -3.1 NADH-quinone oxidoreductase subunit NuoN compare
PFLU_RS19805 -1.4 -2.9 LysR family transcriptional regulator compare
PFLU_RS29365 -1.4 -8.0 cupin domain-containing protein compare
PFLU_RS07540 -1.3 -1.4 class II glutamine amidotransferase compare
PFLU_RS03720 -1.3 -5.8 MerR family transcriptional regulator compare
PFLU_RS04135 -1.3 -7.0 HAMP domain-containing histidine kinase compare
PFLU_RS22835 -1.3 -5.7 amidotransferase compare
PFLU_RS20335 -1.3 -1.0 hypothetical protein compare
PFLU_RS05020 -1.3 -1.2 DUF1120 domain-containing protein compare
PFLU_RS02625 -1.3 -7.4 ribonuclease R compare
PFLU_RS05660 -1.3 -7.9 glycerol kinase GlpK compare
PFLU_RS18165 -1.3 -7.3 transketolase compare
PFLU_RS08535 -1.3 -6.7 response regulator compare
PFLU_RS04660 -1.3 -3.7 division/cell wall cluster transcriptional repressor MraZ compare
PFLU_RS07640 -1.3 -6.1 universal stress protein compare
PFLU_RS08875 -1.2 -2.0 heme-binding protein compare
PFLU_RS19490 -1.2 -4.9 LacI family transcriptional regulator compare
PFLU_RS29275 -1.2 -4.8 DUF484 family protein compare
PFLU_RS16390 -1.2 -1.5 DUF411 domain-containing protein compare
PFLU_RS01290 -1.2 -5.5 30S ribosomal protein S6--L-glutamate ligase compare


Specific Phenotypes

For 22 genes in this experiment

For carbon source N-Acetyl-D-Glucosamine in Pseudomonas fluorescens SBW25-INTG

For carbon source N-Acetyl-D-Glucosamine across organisms