Experiment set8IT088 for Bifidobacterium breve UCC2003

Compare to:

MRS + carbenicillin Time24hr

Group: stress timecourse
Media: MRS + Carbenicillin disodium salt (0.002 mg/mL), pH=7
Culturing: Bifido_ML2, 1L bottle, Anaerobic, at 37 (C), shaken=0 rpm
By: Charlotte Brannon/Becca Culver on 10/21/2020
Media components: 56 mM D-Glucose, 10 g/L Proteose Peptone, 10 g/L Beef extract, 5 g/L Yeast Extract, 1 g/L Tween 80, 0.2 g/L Triammonium citrate, 0.5 g/L Sodium acetate, 0.2 g/L Potassium phosphate dibasic, 0.1 g/L Magnesium sulfate, 0.05 g/L Manganese (II) sulfate monohydrate, 8.25 mM L-Cysteine

Specific Phenotypes

For 1 genes in this experiment

For stress timecourse Carbenicillin disodium salt in Bifidobacterium breve UCC2003

For stress timecourse Carbenicillin disodium salt across organisms

SEED Subsystems

Subsystem #Specific
Cysteine Biosynthesis 1
Glycine and Serine Utilization 1
Methionine Biosynthesis 1
Methionine Degradation 1

Metabolic Maps

Color code by fitness: see overview map or list of maps.

Maps containing gene(s) with specific phenotypes:

MetaCyc Pathways

Pathways that contain genes with specific phenotypes:

Pathway #Steps #Present #Specific
L-cysteine biosynthesis III (from L-homocysteine) 2 2 1
hydrogen sulfide biosynthesis II (mammalian) 6 4 3
taurine biosynthesis III 3 1 1
homocysteine and cysteine interconversion 4 3 1
superpathway of L-cysteine biosynthesis (mammalian) 5 3 1
superpathway of L-cysteine biosynthesis (fungi) 6 4 1
superpathway of sulfur amino acid biosynthesis (Saccharomyces cerevisiae) 10 4 1
superpathway of L-methionine salvage and degradation 16 5 1