Experiment set8IT087 for Pseudomonas fluorescens SBW25-INTG

Compare to:

N-Acetyl-D-Glucosamine carbon source

200 most important genes:

  gene name fitness t score description  
PFLU_RS24655 -5.7 -10.2 phosphoenolpyruvate--protein phosphotransferase conserved
PFLU_RS01620 -5.6 -8.6 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase compare
PFLU_RS15410 -5.4 -3.7 zinc-dependent alcohol dehydrogenase family protein compare
PFLU_RS24640 -5.3 -10.1 GntR family transcriptional regulator conserved
PFLU_RS01625 -5.1 -3.6 imidazole glycerol phosphate synthase subunit HisF compare
PFLU_RS20565 -5.1 -18.2 3-isopropylmalate dehydrogenase compare
PFLU_RS19165 -5.1 -7.0 ATP-dependent Clp protease ATP-binding subunit ClpX compare
PFLU_RS24650 -5.1 -16.3 SIS domain-containing protein conserved
PFLU_RS01605 -5.0 -12.9 imidazoleglycerol-phosphate dehydratase HisB compare
PFLU_RS29880 -4.9 -17.5 acetyl-CoA carboxylase biotin carboxylase subunit compare
PFLU_RS06055 -4.9 -2.8 chemotaxis response regulator protein-glutamate methylesterase compare
PFLU_RS28165 -4.9 -17.3 methylenetetrahydrofolate reductase [NAD(P)H] compare
PFLU_RS02590 -4.8 -12.5 ATP phosphoribosyltransferase regulatory subunit compare
PFLU_RS27370 -4.8 -16.5 anthranilate phosphoribosyltransferase compare
PFLU_RS20540 -4.8 -17.2 phosphoribosylanthranilate isomerase compare
PFLU_RS24660 -4.8 -21.8 PTS transporter subunit IIBC conserved
PFLU_RS25640 -4.7 -18.8 ketol-acid reductoisomerase compare
PFLU_RS00415 -4.7 -3.2 thiol:disulfide interchange protein DsbA/DsbL compare
PFLU_RS25360 -4.6 -11.6 glutamate 5-kinase compare
PFLU_RS01320 -4.6 -12.3 phosphoenolpyruvate carboxykinase compare
PFLU_RS29875 -4.6 -20.5 oxaloacetate decarboxylase subunit alpha compare
PFLU_RS01900 -4.6 -12.9 phosphoribosyl-AMP cyclohydrolase compare
PFLU_RS25760 -4.6 -17.7 glucose-6-phosphate isomerase compare
PFLU_RS20515 -4.6 -8.2 amidophosphoribosyltransferase compare
PFLU_RS19170 -4.5 -9.2 ATP-dependent Clp endopeptidase proteolytic subunit ClpP compare
PFLU_RS28535 -4.5 -21.7 dihydroxy-acid dehydratase compare
PFLU_RS22740 -4.4 -4.3 phosphoadenylyl-sulfate reductase compare
PFLU_RS24765 -4.4 -25.7 2-isopropylmalate synthase compare
PFLU_RS28385 -4.4 -18.8 homoserine O-acetyltransferase compare
PFLU_RS04465 -4.4 -12.2 ATP phosphoribosyltransferase compare
PFLU_RS13540 -4.3 -8.3 3-phosphoshikimate 1-carboxyvinyltransferase compare
PFLU_RS25645 -4.3 -5.1 acetolactate synthase small subunit compare
PFLU_RS08155 -4.3 -7.2 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
PFLU_RS00175 -4.3 -15.3 tryptophan synthase subunit alpha compare
PFLU_RS27365 -4.3 -11.0 indole-3-glycerol phosphate synthase TrpC compare
PFLU_RS18505 -4.3 -15.1 uroporphyrinogen-III C-methyltransferase compare
PFLU_RS29885 -4.3 -14.5 LysR family transcriptional regulator compare
PFLU_RS00180 -4.2 -11.6 tryptophan synthase subunit beta compare
PFLU_RS20580 -4.2 -17.9 3-isopropylmalate dehydratase large subunit compare
PFLU_RS04385 -4.2 -14.1 RNase adapter RapZ compare
PFLU_RS02490 -4.1 -15.1 phosphoserine phosphatase SerB compare
PFLU_RS29095 -4.1 -26.1 polyphosphate kinase 1 compare
PFLU_RS24645 -4.1 -14.1 N-acetylglucosamine-6-phosphate deacetylase conserved
PFLU_RS20575 -4.1 -7.4 3-isopropylmalate dehydratase small subunit compare
PFLU_RS11525 -4.1 -6.8 GntR family transcriptional regulator compare
PFLU_RS27475 -4.0 -14.3 symmetrical bis(5'-nucleosyl)-tetraphosphatase compare
PFLU_RS18755 -4.0 -12.3 TetR/AcrR family transcriptional regulator compare
PFLU_RS02565 -4.0 -12.1 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA compare
PFLU_RS04470 -4.0 -15.6 histidinol dehydrogenase compare
PFLU_RS18940 -4.0 -15.0 acyl-CoA dehydrogenase compare
PFLU_RS28390 -4.0 -12.9 methionine biosynthesis protein MetW compare
PFLU_RS12580 -4.0 -12.5 MurR/RpiR family transcriptional regulator compare
PFLU_RS25735 -4.0 -12.2 sigma-54-dependent Fis family transcriptional regulator compare
PFLU_RS09055 -3.7 -9.9 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase compare
PFLU_RS28655 -3.7 -18.3 HAD family hydrolase compare
PFLU_RS29215 -3.7 -13.5 response regulator transcription factor compare
PFLU_RS03770 -3.6 -15.5 sulfate adenylyltransferase subunit CysN compare
PFLU_RS30160 -3.6 -5.5 ParB/RepB/Spo0J family partition protein compare
PFLU_RS01765 -3.6 -12.5 histidine utilization repressor compare
PFLU_RS25585 -3.5 -5.5 exodeoxyribonuclease V subunit alpha compare
PFLU_RS12980 -3.5 -13.5 nitrite/sulfite reductase compare
PFLU_RS09575 -3.5 -6.4 FadR family transcriptional regulator compare
PFLU_RS04220 -3.5 -12.8 FadR family transcriptional regulator compare
PFLU_RS24330 -3.5 -11.0 phosphogluconate dehydratase compare
PFLU_RS20510 -3.5 -15.8 O-succinylhomoserine sulfhydrylase compare
PFLU_RS25730 -3.4 -18.8 PAS domain S-box protein compare
PFLU_RS01610 -3.4 -13.9 imidazole glycerol phosphate synthase subunit HisH compare
PFLU_RS03765 -3.4 -10.8 sulfate adenylyltransferase subunit CysD compare
PFLU_RS23725 -3.4 -15.6 glucose-6-phosphate dehydrogenase compare
PFLU_RS07805 -3.3 -18.3 transaldolase compare
PFLU_RS08125 -3.3 -4.7 integration host factor subunit beta compare
PFLU_RS18550 -3.3 -12.9 ATP-dependent Clp protease ATP-binding subunit ClpA compare
PFLU_RS07725 -3.3 -7.5 Si-specific NAD(P)(+) transhydrogenase compare
PFLU_RS25595 -3.2 -4.9 exodeoxyribonuclease V subunit gamma compare
PFLU_RS27440 -3.2 -8.8 nucleotidyltransferase family protein compare
PFLU_RS28695 -3.2 -8.3 phosphoglycerate dehydrogenase compare
PFLU_RS21495 -3.2 -5.6 TlpA family protein disulfide reductase compare
PFLU_RS27690 -3.1 -2.1 response regulator compare
PFLU_RS24095 -3.1 -5.4 crossover junction endodeoxyribonuclease RuvC compare
PFLU_RS18655 -3.1 -3.7 NADH-quinone oxidoreductase subunit J compare
PFLU_RS19160 -3.1 -14.4 endopeptidase La compare
PFLU_RS19015 -3.1 -9.7 anti-sigma factor compare
PFLU_RS24335 -3.0 -14.0 type I glyceraldehyde-3-phosphate dehydrogenase compare
PFLU_RS28645 -3.0 -13.8 phosphoenolpyruvate--protein phosphotransferase compare
PFLU_RS27465 -3.0 -7.2 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA compare
PFLU_RS16935 -3.0 -4.0 CoA ester lyase compare
PFLU_RS18615 -2.9 -4.2 NADH-quinone oxidoreductase subunit A compare
PFLU_RS01895 -2.8 -8.3 phosphoribosyl-ATP diphosphatase compare
PFLU_RS08445 -2.8 -8.7 MarR family transcriptional regulator compare
PFLU_RS25315 -2.8 -8.2 dihydroneopterin triphosphate 2'-epimerase compare
PFLU_RS18740 -2.7 -5.5 Dyp-type peroxidase conserved
PFLU_RS25800 -2.6 -10.5 tRNA pseudouridine(55) synthase TruB compare
PFLU_RS29290 -2.6 -4.3 hypothetical protein compare
PFLU_RS08505 -2.6 -8.1 protease HtpX compare
PFLU_RS13715 -2.6 -2.6 MmcQ/YjbR family DNA-binding protein compare
PFLU_RS15065 -2.6 -6.5 IclR family transcriptional regulator compare
PFLU_RS22630 -2.6 -15.5 phosphoenolpyruvate synthase compare
PFLU_RS12660 -2.6 -8.6 hypothetical protein compare
PFLU_RS02275 -2.5 -3.8 pyruvate dehydrogenase (acetyl-transferring), homodimeric type compare
PFLU_RS08065 -2.5 -8.8 N-acetylmuramic acid 6-phosphate phosphatase MupP compare
PFLU_RS04565 -2.5 -1.8 TMEM165/GDT1 family protein compare
PFLU_RS28965 -2.5 -9.8 5-formyltetrahydrofolate cyclo-ligase compare
PFLU_RS21740 -2.5 -7.6 Hpt domain-containing protein compare
PFLU_RS29785 -2.5 -13.6 D-hexose-6-phosphate mutarotase conserved
PFLU_RS25305 -2.4 -8.7 dihydromonapterin reductase compare
PFLU_RS04660 -2.4 -5.9 division/cell wall cluster transcriptional repressor MraZ compare
PFLU_RS12975 -2.4 -4.7 DUF934 domain-containing protein compare
PFLU_RS12040 -2.4 -7.9 divalent metal cation transporter conserved
PFLU_RS07275 -2.4 -3.8 4-hydroxy-tetrahydrodipicolinate synthase compare
PFLU_RS13475 -2.4 -12.3 alpha-1,4-glucan--maltose-1-phosphate maltosyltransferase compare
PFLU_RS01955 -2.3 -7.7 DUF971 domain-containing protein compare
PFLU_RS22105 -2.3 -5.4 cysteine synthase CysM compare
PFLU_RS04325 -2.3 -14.2 ribonuclease G compare
PFLU_RS18665 -2.3 -5.6 NADH-quinone oxidoreductase subunit L compare
PFLU_RS25875 -2.3 -5.9 transcription elongation factor GreA compare
PFLU_RS22195 -2.3 -3.6 DEAD/DEAH box helicase compare
PFLU_RS13485 -2.2 -12.5 1,4-alpha-glucan branching protein GlgB compare
PFLU_RS23310 -2.2 -9.3 arginine/ornithine succinyltransferase subunit alpha compare
PFLU_RS30165 -2.1 -9.2 ParA family protein compare
PFLU_RS22520 -2.1 -4.4 GntR family transcriptional regulator compare
PFLU_RS04445 -2.1 -6.9 ABC transporter substrate-binding protein compare
PFLU_RS24120 -2.1 -15.3 DNA starvation/stationary phase protection protein conserved
PFLU_RS03970 -2.1 -7.5 carboxylating nicotinate-nucleotide diphosphorylase compare
PFLU_RS24090 -2.1 -6.1 Holliday junction branch migration protein RuvA compare
PFLU_RS23070 -2.1 -1.8 50S ribosomal protein L32 compare
PFLU_RS07665 -2.1 -3.3 type I DNA topoisomerase compare
PFLU_RS24710 -2.0 -7.8 alpha,alpha-phosphotrehalase compare
PFLU_RS24205 -2.0 -2.4 DNA binding protein compare
PFLU_RS26735 -2.0 -8.0 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase compare
PFLU_RS24085 -2.0 -5.0 Holliday junction branch migration DNA helicase RuvB compare
PFLU_RS18530 -2.0 -5.7 DNA translocase FtsK compare
PFLU_RS25715 -1.9 -9.7 RNA polymerase-binding protein DksA compare
PFLU_RS22190 -1.9 -1.8 hypothetical protein compare
PFLU_RS09305 -1.8 -10.9 hypothetical protein compare
PFLU_RS18645 -1.8 -2.6 NADH-quinone oxidoreductase subunit NuoH compare
PFLU_RS21215 -1.8 -2.2 YheU family protein compare
PFLU_RS08380 -1.8 -7.1 3-deoxy-7-phosphoheptulonate synthase compare
PFLU_RS18675 -1.8 -3.4 NADH-quinone oxidoreductase subunit NuoN compare
PFLU_RS29360 -1.7 -1.6 cytochrome c5 family protein compare
PFLU_RS05235 -1.7 -7.6 leucyl aminopeptidase compare
PFLU_RS09500 -1.7 -1.8 hypothetical protein compare
PFLU_RS28665 -1.7 -11.1 threonine ammonia-lyase, biosynthetic compare
PFLU_RS18640 -1.7 -4.0 NADH-quinone oxidoreductase subunit NuoG compare
PFLU_RS29275 -1.7 -4.5 DUF484 family protein compare
PFLU_RS04435 -1.7 -6.4 lipid asymmetry maintenance ABC transporter permease subunit MlaE compare
PFLU_RS18620 -1.7 -6.0 NADH-quinone oxidoreductase subunit B compare
PFLU_RS18635 -1.7 -3.6 NADH-quinone oxidoreductase subunit NuoF compare
PFLU_RS24860 -1.7 -2.4 Fe-S cluster assembly transcriptional regulator IscR compare
PFLU_RS22595 -1.7 -3.6 OmpA family protein compare
PFLU_RS15610 -1.6 -5.2 helix-turn-helix transcriptional regulator compare
PFLU_RS07540 -1.6 -2.2 class II glutamine amidotransferase compare
PFLU_RS08410 -1.6 -5.7 HTH-type transcriptional regulator CysB compare
PFLU_RS23235 -1.6 -2.3 Arc family DNA-binding protein compare
PFLU_RS08160 -1.6 -7.7 sugar transferase compare
PFLU_RS08370 -1.6 -3.3 hypothetical protein compare
PFLU_RS29545 -1.6 -7.9 hydrogen peroxide-inducible genes activator compare
PFLU_RS11620 -1.6 -8.1 FadR family transcriptional regulator compare
PFLU_RS18670 -1.6 -1.8 NADH-quinone oxidoreductase subunit M compare
PFLU_RS18625 -1.6 -6.4 NADH-quinone oxidoreductase subunit C/D compare
PFLU_RS04655 -1.5 -6.2 16S rRNA (cytidine(1402)-2'-O)-methyltransferase compare
PFLU_RS27380 -1.5 -8.8 anthranilate synthase component I compare
PFLU_RS21665 -1.5 -6.5 MinD/ParA family protein compare
PFLU_RS22735 -1.5 -7.9 bifunctional phosphoserine phosphatase/homoserine phosphotransferase ThrH compare
PFLU_RS07785 -1.5 -8.4 VacJ family lipoprotein compare
PFLU_RS16940 -1.5 -6.0 CoA transferase compare
PFLU_RS26145 -1.5 -1.3 hypothetical protein compare
PFLU_RS13120 -1.5 -2.0 hypothetical protein compare
PFLU_RS19120 -1.4 -3.1 MarR family transcriptional regulator compare
PFLU_RS24025 -1.4 -6.7 quinolinate synthase NadA compare
PFLU_RS08535 -1.4 -8.3 response regulator compare
PFLU_RS12785 -1.4 -6.0 transporter substrate-binding domain-containing protein compare
PFLU_RS04440 -1.4 -7.4 outer membrane lipid asymmetry maintenance protein MlaD compare
PFLU_RS10325 -1.4 -6.9 MFS transporter compare
PFLU_RS04430 -1.4 -5.9 ATP-binding cassette domain-containing protein compare
PFLU_RS04530 -1.4 -2.0 hypothetical protein compare
PFLU_RS28650 -1.3 -4.8 RNA pyrophosphohydrolase compare
PFLU_RS18555 -1.3 -5.2 ATP-dependent Clp protease adapter ClpS compare
PFLU_RS03720 -1.3 -6.2 MerR family transcriptional regulator compare
PFLU_RS31275 -1.3 -1.7 hypothetical protein compare
PFLU_RS08105 -1.3 -5.6 bifunctional prephenate dehydrogenase/3-phosphoshikimate 1-carboxyvinyltransferase compare
PFLU_RS28785 -1.3 -7.3 glutamine synthetase compare
PFLU_RS29905 -1.3 -5.8 Tim44 domain-containing protein compare
PFLU_RS21140 -1.3 -10.0 EAL domain-containing protein compare
PFLU_RS07525 -1.3 -1.5 cyclic nucleotide-binding domain-containing protein compare
PFLU_RS13895 -1.3 -2.0 helix-turn-helix transcriptional regulator compare
PFLU_RS02280 -1.2 -6.8 bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase compare
PFLU_RS05660 -1.2 -8.5 glycerol kinase GlpK compare
PFLU_RS29365 -1.2 -7.0 cupin domain-containing protein compare
PFLU_RS22835 -1.2 -5.8 amidotransferase compare
PFLU_RS07755 -1.2 -4.2 heavy metal sensor histidine kinase compare
PFLU_RS14820 -1.2 -4.6 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase compare
PFLU_RS20290 -1.2 -1.6 integration host factor subunit alpha compare
PFLU_RS04135 -1.2 -7.1 HAMP domain-containing histidine kinase compare
PFLU_RS22070 -1.2 -2.9 phosphoribosylglycinamide formyltransferase compare
PFLU_RS14500 -1.2 -3.8 hypothetical protein compare
PFLU_RS04070 -1.2 -3.3 peptide chain release factor 3 compare
PFLU_RS24245 -1.2 -4.6 PilZ domain-containing protein compare
PFLU_RS26565 -1.2 -1.3 rRNA maturation RNase YbeY compare
PFLU_RS23815 -1.2 -8.9 GGDEF and EAL domain-containing protein compare
PFLU_RS22680 -1.2 -7.0 Fe/S-dependent 2-methylisocitrate dehydratase AcnD compare


Specific Phenotypes

For 19 genes in this experiment

For carbon source N-Acetyl-D-Glucosamine in Pseudomonas fluorescens SBW25-INTG

For carbon source N-Acetyl-D-Glucosamine across organisms