Experiment set8IT082 for Klebsiella michiganensis M5al

Compare to:

RCH2_defined_glucose with Brachypodium distachyon 13-day exudates 1x

200 most important genes:

  gene name fitness t score description  
BWI76_RS23920 -7.4 -7.3 D-3-phosphoglycerate dehydrogenase compare
BWI76_RS04465 -7.2 -7.0 carbamoyl-phosphate synthase small subunit compare
BWI76_RS23360 -7.0 -4.9 diaminopimelate decarboxylase compare
BWI76_RS26085 -6.7 -4.4 3-dehydroquinate synthase compare
BWI76_RS18930 -6.6 -5.4 histidinol-phosphate transaminase compare
BWI76_RS04470 -6.5 -11.6 carbamoyl phosphate synthase large subunit compare
BWI76_RS01615 -6.3 -12.2 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS21475 -6.3 -6.1 bifunctional chorismate mutase/prephenate dehydrogenase compare
BWI76_RS27385 -6.3 -8.8 orotate phosphoribosyltransferase compare
BWI76_RS09760 -6.2 -4.2 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS20895 -6.2 -5.8 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS04160 -6.2 -6.7 phosphoserine phosphatase compare
BWI76_RS20350 -6.2 -6.6 amidophosphoribosyltransferase compare
BWI76_RS18950 -6.1 -5.0 imidazole glycerol phosphate synthase cyclase subunit compare
BWI76_RS07070 -6.1 -7.2 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS21265 -6.1 -15.6 phosphoribosylformylglycinamidine synthase compare
BWI76_RS01610 -5.9 -5.6 phosphoribosylamine--glycine ligase compare
BWI76_RS04645 -5.6 -6.5 3-dehydroquinase compare
BWI76_RS20965 -5.6 -3.6 phosphoribosylformylglycinamidine cyclo-ligase compare
BWI76_RS09755 -5.6 -6.8 phosphoserine transaminase compare
BWI76_RS04250 -5.6 -6.0 homoserine kinase compare
BWI76_RS02995 -5.6 -10.7 aspartate carbamoyltransferase compare
BWI76_RS20355 -5.5 -2.8 colicin V production protein compare
BWI76_RS11965 -5.5 -4.8 orotidine-5'-phosphate decarboxylase compare
BWI76_RS25645 -5.0 -8.1 shikimate dehydrogenase compare
BWI76_RS00400 -4.9 -3.2 glutamine synthetase compare
BWI76_RS00850 -4.8 -11.1 acetylglutamate kinase compare
BWI76_RS09910 -4.8 -15.0 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS22755 -4.7 -8.2 phosphoadenosine phosphosulfate reductase compare
BWI76_RS23365 -4.7 -5.4 LysR family transcriptional regulator compare
BWI76_RS00835 -4.7 -13.7 phosphoenolpyruvate carboxylase compare
BWI76_RS00855 -4.6 -8.8 argininosuccinate lyase compare
BWI76_RS00785 -4.6 -9.3 cystathionine gamma-synthase compare
BWI76_RS05835 -4.6 -3.5 gamma-glutamyl-phosphate reductase compare
BWI76_RS08385 -4.5 -3.1 citrate (Si)-synthase compare
BWI76_RS00990 -4.5 -12.2 ketol-acid reductoisomerase compare
BWI76_RS18935 -4.4 -8.5 bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase compare
BWI76_RS05840 -4.4 -6.6 glutamate 5-kinase compare
BWI76_RS00845 -4.3 -10.9 N-acetyl-gamma-glutamyl-phosphate reductase compare
BWI76_RS18920 -4.2 -3.6 ATP phosphoribosyltransferase compare
BWI76_RS00975 -4.2 -9.3 dihydroxy-acid dehydratase compare
BWI76_RS20435 -4.1 -2.2 chorismate synthase compare
BWI76_RS25115 -4.1 -8.5 argininosuccinate synthase compare
BWI76_RS07065 -4.0 -5.8 5-(carboxyamino)imidazole ribonucleotide synthase compare
BWI76_RS18940 -4.0 -5.1 imidazole glycerol phosphate synthase subunit HisH compare
BWI76_RS10990 -4.0 -4.6 dihydroorotase compare
BWI76_RS23220 -3.9 -8.9 amino-acid N-acetyltransferase compare
BWI76_RS18925 -3.9 -7.8 histidinol dehydrogenase compare
BWI76_RS04240 -3.9 -4.0 thr operon leader peptide compare
BWI76_RS04245 -3.8 -14.4 bifunctional aspartate kinase/homoserine dehydrogenase I compare
BWI76_RS04255 -3.7 -9.6 threonine synthase compare
BWI76_RS03010 -3.7 -9.5 ornithine carbamoyltransferase compare
BWI76_RS22765 -3.7 -12.6 sulfite reductase subunit alpha compare
BWI76_RS27390 -3.7 -3.7 ribonuclease PH compare
BWI76_RS23240 -3.7 -3.5 exonuclease V subunit gamma compare
BWI76_RS09645 -3.5 -2.6 thioredoxin-disulfide reductase compare
BWI76_RS04670 -3.5 -10.9 3-isopropylmalate dehydratase large subunit compare
BWI76_RS00805 -3.4 -4.7 5,10-methylenetetrahydrofolate reductase compare
BWI76_RS09660 -3.3 -2.3 DNA translocase FtsK compare
BWI76_RS00980 -3.3 -12.7 PLP-dependent threonine dehydratase compare
BWI76_RS22760 -3.3 -7.9 sulfite reductase subunit beta compare
BWI76_RS18955 -3.3 -4.2 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase compare
BWI76_RS20650 -3.3 -3.2 phosphoenolpyruvate--protein phosphotransferase compare
BWI76_RS04665 -3.2 -21.1 3-isopropylmalate dehydratase small subunit compare
BWI76_RS01655 -3.1 -11.2 homoserine O-succinyltransferase compare
BWI76_RS04675 -3.1 -6.1 3-isopropylmalate dehydrogenase compare
BWI76_RS11840 -3.0 -4.7 tryptophan synthase subunit alpha compare
BWI76_RS02735 -3.0 -6.6 3'(2'),5'-bisphosphate nucleotidase CysQ compare
BWI76_RS26000 -2.9 -8.6 aspartate aminotransferase family protein compare
BWI76_RS22690 -2.9 -4.6 adenylyl-sulfate kinase compare
BWI76_RS11845 -2.6 -5.1 tryptophan synthase subunit beta compare
BWI76_RS01210 -2.5 -2.9 tyrosine recombinase XerC compare
BWI76_RS23230 -2.4 -4.0 exodeoxyribonuclease V subunit beta compare
BWI76_RS24285 -2.4 -10.3 cystathionine beta-lyase compare
BWI76_RS04680 -2.4 -10.3 2-isopropylmalate synthase compare
BWI76_RS21480 -2.4 -6.8 phospho-2-dehydro-3-deoxyheptonate aldolase compare
BWI76_RS00985 -2.2 -6.7 transcriptional regulator IlvY compare
BWI76_RS00965 -2.2 -1.9 acetolactate synthase 2 small subunit compare
BWI76_RS02530 -2.2 -3.2 tRNA dimethylallyltransferase compare
BWI76_RS21370 -2.0 -3.3 ATP-dependent RNA helicase SrmB compare
BWI76_RS01800 -2.0 -4.4 glucose-6-phosphate isomerase compare
BWI76_RS04685 -1.9 -5.6 putative leucine operon leader peptide compare
BWI76_RS26055 -1.9 -10.1 siroheme synthase compare
BWI76_RS08720 -1.9 -2.8 imidazolonepropionase compare
BWI76_RS11860 -1.9 -6.4 anthranilate synthase component I compare
BWI76_RS05200 -1.8 -3.2 bifunctional uridylyltransferase/uridylyl-removing protein compare
BWI76_RS11850 -1.8 -7.3 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase compare
BWI76_RS11855 -1.7 -6.8 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase compare
BWI76_RS21140 -1.7 -2.2 molecular chaperone HscA compare
BWI76_RS20440 -1.6 -1.4 50S ribosomal protein L3 N(5)-glutamine methyltransferase compare
BWI76_RS21465 -1.5 -3.4 bifunctional chorismate mutase/prephenate dehydratase compare
BWI76_RS12090 -1.5 -2.6 HNH endonuclease compare
BWI76_RS04305 -1.5 -1.4 molecular chaperone DnaJ compare
BWI76_RS09655 -1.5 -5.7 leucine-responsive regulatory protein compare
BWI76_RS26570 -1.5 -3.4 anion permease compare
BWI76_RS22805 -1.4 -8.2 GTP diphosphokinase compare
BWI76_RS15850 -1.4 -0.9 DUF1317 domain-containing protein compare
BWI76_RS01200 -1.4 -1.8 diaminopimelate epimerase compare
BWI76_RS15840 -1.3 -2.7 prophage protein compare
BWI76_RS23265 -1.3 -3.8 hypothetical protein compare
BWI76_RS25335 -1.3 -3.2 stringent starvation protein A compare
BWI76_RS23885 -1.3 -1.4 2-octaprenylphenol hydroxylase compare
BWI76_RS18755 -1.3 -1.3 adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase compare
BWI76_RS14625 -1.2 -1.3 protein TolA compare
BWI76_RS19010 -1.2 -2.4 polysaccharide pyruvyl transferase yvff compare
BWI76_RS17400 -1.2 -1.4 transporter compare
BWI76_RS19375 -1.2 -2.1 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase compare
BWI76_RS00345 -1.2 -3.5 protein disulfide oxidoreductase DsbA compare
BWI76_RS22695 -1.2 -3.8 sulfate adenylyltransferase compare
BWI76_RS01185 -1.2 -2.3 adenylate cyclase compare
BWI76_RS17945 -1.2 -1.8 hypothetical protein compare
BWI76_RS22700 -1.1 -5.2 sulfate adenylyltransferase subunit 2 compare
BWI76_RS23480 -1.1 -6.9 EAL domain-containing protein compare
BWI76_RS16275 -1.1 -1.8 fumarate hydratase FumA compare
BWI76_RS00390 -1.1 -3.1 two-component system sensor histidine kinase NtrB compare
BWI76_RS09190 -1.1 -2.6 hypothetical protein compare
BWI76_RS04100 -1.0 -2.7 peptide chain release factor 3 compare
BWI76_RS00960 -1.0 -3.4 acetolactate synthase 2 catalytic subunit compare
BWI76_RS14005 -1.0 -1.6 TetR family transcriptional regulator compare
BWI76_RS05450 -1.0 -1.7 ribonuclease HI compare
BWI76_RS20640 -1.0 -3.3 cysteine synthase A compare
BWI76_RS25070 -1.0 -1.6 hypothetical protein compare
BWI76_RS25065 -1.0 -1.8 polyribonucleotide nucleotidyltransferase compare
BWI76_RS07805 -1.0 -1.1 sugar ABC transporter permease compare
BWI76_RS01275 -1.0 -3.4 LysR family transcriptional regulator compare
BWI76_RS10890 -1.0 -1.5 glyoxylate/hydroxypyruvate reductase A compare
BWI76_RS13685 -0.9 -1.9 IclR family transcriptional regulator compare
BWI76_RS09650 -0.9 -3.8 hypothetical protein compare
BWI76_RS11515 -0.9 -1.3 peptide-methionine (R)-S-oxide reductase compare
BWI76_RS16090 -0.9 -1.6 two-component system response regulator DcuR compare
BWI76_RS04530 -0.9 -1.7 peptidylprolyl isomerase SurA compare
BWI76_RS08210 -0.9 -1.2 N-acetylglucosamine-6-phosphate deacetylase compare
BWI76_RS24100 -0.9 -1.9 YggS family pyridoxal phosphate enzyme compare
BWI76_RS17190 -0.9 -1.9 TonB system transport protein TonB compare
BWI76_RS09195 -0.9 -1.6 N-acetyltransferase compare
BWI76_RS14240 -0.9 -2.2 thiol reductase thioredoxin compare
BWI76_RS07255 -0.8 -2.0 hypothetical protein compare
BWI76_RS25280 -0.8 -1.8 RNase adaptor protein RapZ compare
BWI76_RS06680 -0.8 -0.8 hypothetical protein compare
BWI76_RS16355 -0.8 -1.5 electron transport complex subunit A compare
BWI76_RS12860 -0.8 -1.8 hypothetical protein compare
BWI76_RS07765 -0.8 -1.9 thioesterase compare
BWI76_RS00385 -0.8 -4.5 nitrogen assimilation regulatory protein compare
BWI76_RS11130 -0.8 -3.3 PTS glucose transporter subunit IIBC compare
BWI76_RS06800 -0.7 -1.0 DUF2496 domain-containing protein compare
BWI76_RS19465 -0.7 -1.9 hypothetical protein compare
BWI76_RS09050 -0.7 -1.9 MFS transporter compare
BWI76_RS14680 -0.7 -1.7 SefF compare
BWI76_RS00025 -0.7 -0.7 hypothetical protein compare
BWI76_RS04955 -0.7 -1.5 hypoxanthine phosphoribosyltransferase compare
BWI76_RS01925 -0.7 -4.5 aromatic amino acid aminotransferase compare
BWI76_RS15350 -0.7 -0.9 hypothetical protein compare
BWI76_RS17100 -0.7 -1.6 glutathione peroxidase compare
BWI76_RS16675 -0.7 -1.3 ABC transporter compare
BWI76_RS25320 -0.7 -3.1 glutamate synthase compare
BWI76_RS22135 -0.7 -1.6 transport-associated protein compare
BWI76_RS15830 -0.7 -1.6 hypothetical protein compare
BWI76_RS18815 -0.7 -0.9 nitrogenase molybdenum-iron protein alpha chain compare
BWI76_RS18165 -0.7 -1.0 NUDIX pyrophosphatase compare
BWI76_RS13170 -0.7 -2.2 methyltransferase compare
BWI76_RS13240 -0.7 -1.0 hypothetical protein compare
BWI76_RS25425 -0.7 -1.1 arginine repressor compare
BWI76_RS21000 -0.7 -3.1 exopolyphosphatase compare
BWI76_RS05925 -0.6 -1.8 hypothetical protein compare
BWI76_RS11125 -0.6 -1.0 metal-dependent hydrolase compare
BWI76_RS13610 -0.6 -1.6 sugar transporter compare
BWI76_RS07995 -0.6 -1.8 twin-arginine translocase subunit TatA compare
BWI76_RS14980 -0.6 -0.8 hypothetical protein compare
BWI76_RS06805 -0.6 -1.3 primosomal replication protein N'' compare
BWI76_RS09515 -0.6 -1.9 arginine ABC transporter substrate-binding protein compare
BWI76_RS14735 -0.6 -2.0 type 11 methyltransferase compare
BWI76_RS12045 -0.6 -1.2 hypothetical protein compare
BWI76_RS24785 -0.6 -2.5 DUF805 domain-containing protein compare
BWI76_RS22705 -0.6 -3.1 siroheme synthase compare
BWI76_RS20910 -0.6 -2.7 glycine cleavage system transcriptional repressor compare
BWI76_RS12420 -0.6 -0.7 peptide ABC transporter substrate-binding protein SapA compare
BWI76_RS15835 -0.6 -0.6 hypothetical protein compare
BWI76_RS19025 -0.6 -3.8 phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) compare
BWI76_RS24620 -0.6 -2.1 PadR family transcriptional regulator compare
BWI76_RS09315 -0.6 -1.3 hypothetical protein compare
BWI76_RS14155 -0.6 -1.8 transketolase compare
BWI76_RS17975 -0.6 -1.9 tail-specific protease compare
BWI76_RS20970 -0.6 -1.0 phosphoribosylglycinamide formyltransferase compare
BWI76_RS25505 -0.6 -3.8 RNase E specificity factor CsrD compare
BWI76_RS20995 -0.6 -2.5 RNA degradosome polyphosphate kinase compare
BWI76_RS20940 -0.6 -1.8 uracil/xanthine transporter compare
BWI76_RS25060 -0.6 -1.3 lipoprotein NlpI compare
BWI76_RS16195 -0.6 -1.1 hypothetical protein compare
BWI76_RS10700 -0.6 -2.5 XRE family transcriptional regulator compare
BWI76_RS05015 -0.6 -1.3 transcriptional regulator compare
BWI76_RS06765 -0.6 -2.4 transcriptional regulator compare
BWI76_RS23015 -0.6 -1.0 cobalt transporter ATP-binding subunit compare
BWI76_RS20430 -0.6 -1.8 penicillin-insensitive murein endopeptidase compare
BWI76_RS14415 -0.6 -1.2 transcriptional regulator, TetR family protein compare
BWI76_RS01685 -0.6 -4.1 methionine synthase compare
BWI76_RS23915 -0.6 -1.5 5-formyltetrahydrofolate cyclo-ligase compare
BWI76_RS19690 -0.6 -1.6 LysR family transcriptional regulator compare
BWI76_RS20785 -0.6 -0.8 ethanolamine utilization protein EutJ compare
BWI76_RS20750 -0.6 -0.7 carboxysome structural protein EutK compare
BWI76_RS22640 -0.6 -1.4 hypothetical protein compare


Specific Phenotypes

For 1 genes in this experiment

For exudates Brachypodium distachyon 13-day exudates in Klebsiella michiganensis M5al

For exudates Brachypodium distachyon 13-day exudates across organisms