Experiment set8IT082 for Klebsiella michiganensis M5al

Compare to:

RCH2_defined_glucose with Brachypodium distachyon 13-day exudates 1x

200 most detrimental genes:

  gene name fitness t score description  
BWI76_RS06930 +1.3 8.2 iron export ABC transporter permease subunit FetB compare
BWI76_RS16895 +1.3 3.4 3-(3-hydroxy-phenyl)propionate transporter MhpT compare
BWI76_RS21810 +1.0 2.2 universal stress protein compare
BWI76_RS06925 +1.0 7.5 iron ABC transporter ATP-binding protein FetA compare
BWI76_RS00380 +1.0 6.7 oxygen-independent coproporphyrinogen III oxidase compare
BWI76_RS20145 +1.0 2.5 NADH-quinone oxidoreductase subunit K compare
BWI76_RS14410 +0.9 2.7 hypothetical protein compare
BWI76_RS24110 +0.9 2.5 YggU family protein compare
BWI76_RS19325 +0.9 2.3 mandelate racemase compare
BWI76_RS06540 +0.8 3.5 DNA-binding protein HU-beta compare
BWI76_RS13250 +0.8 1.5 cytochrome b561 compare
BWI76_RS16445 +0.8 1.8 auxiliary transporter membrane fusion protein compare
BWI76_RS13560 +0.8 1.2 amino acid ABC transporter substrate-binding subunit compare
BWI76_RS24720 +0.8 2.7 hypothetical protein compare
BWI76_RS05965 +0.8 2.8 hypothetical protein compare
BWI76_RS17155 +0.8 2.0 hypothetical protein compare
BWI76_RS07185 +0.8 2.0 hypothetical protein compare
BWI76_RS16240 +0.8 2.0 anti-adapter protein IraM compare
BWI76_RS08260 +0.8 1.8 LysR family transcriptional regulator compare
BWI76_RS08495 +0.8 3.0 cytochrome bd-I ubiquinol oxidase subunit I compare
BWI76_RS08380 +0.7 0.8 endonuclease VIII compare
BWI76_RS14915 +0.7 1.9 hypothetical protein compare
BWI76_RS09640 +0.7 3.3 cysteine/glutathione ABC transporter permease/ATP-binding protein CydD compare
BWI76_RS10900 +0.7 2.0 putative oxidoreductase compare
BWI76_RS20150 +0.7 1.8 NADH:ubiquinone oxidoreductase subunit J compare
BWI76_RS23970 +0.7 2.0 mechanosensitive ion channel protein MscS compare
BWI76_RS20735 +0.7 3.4 N-acetylmuramoyl-L-alanine amidase compare
BWI76_RS24070 +0.7 2.6 16S rRNA (uracil(1498)-N(3))-methyltransferase compare
BWI76_RS15115 +0.7 3.4 MFS transporter compare
BWI76_RS08500 +0.7 1.6 cytochrome d ubiquinol oxidase subunit 2 compare
BWI76_RS16795 +0.7 2.3 amino acid ABC transporter ATPase compare
BWI76_RS24575 +0.7 1.2 hypothetical protein compare
BWI76_RS19205 +0.6 3.6 putative proline iminopeptidase compare
BWI76_RS16210 +0.6 1.7 hypothetical protein compare
BWI76_RS15290 +0.6 1.2 transcriptional regulator compare
BWI76_RS25000 +0.6 0.7 malonate decarboxylase acyl carrier protein compare
BWI76_RS08585 +0.6 2.8 nicotinamide riboside transporter PnuC compare
BWI76_RS04270 +0.6 3.7 transaldolase compare
BWI76_RS09960 +0.6 2.5 Lon protease compare
BWI76_RS17330 +0.6 3.1 nitrate reductase subunit beta compare
BWI76_RS09625 +0.6 1.4 hypothetical protein compare
BWI76_RS09635 +0.6 1.8 amino acid ABC transporter ATP-binding protein compare
BWI76_RS09455 +0.6 1.6 YbjN domain-containing protein compare
BWI76_RS17955 +0.6 1.4 hypothetical protein compare
BWI76_RS13160 +0.6 1.7 azoreductase compare
BWI76_RS16920 +0.6 1.7 3-(2,3-dihydroxyphenyl)propionate dioxygenase compare
BWI76_RS14815 +0.6 2.1 MdaB protein compare
BWI76_RS00480 +0.6 1.9 hypothetical protein compare
BWI76_RS18385 +0.6 1.1 hypothetical protein compare
BWI76_RS16815 +0.6 1.9 periplasmic binding protein compare
BWI76_RS01585 +0.6 3.1 transcriptional regulator compare
BWI76_RS18175 +0.6 1.7 hydrolase compare
BWI76_RS18470 +0.6 1.6 hypothetical protein compare
BWI76_RS09530 +0.6 1.0 hypothetical protein compare
BWI76_RS11110 +0.6 1.6 cell division protein YceG compare
BWI76_RS14285 +0.6 3.1 IS3 family transposase compare
BWI76_RS16510 +0.6 1.7 transcriptional repressor PurR compare
BWI76_RS07955 +0.6 0.8 nucleoside diphosphate kinase regulator compare
BWI76_RS25700 +0.6 3.9 heavy metal-responsive transcriptional regulator compare
BWI76_RS13915 +0.6 2.9 magnesium transport protein MgtC compare
BWI76_RS12070 +0.6 0.9 hypothetical protein compare
BWI76_RS05950 +0.6 1.4 polar amino acid ABC transporter inner membrane subunit compare
BWI76_RS24915 +0.6 3.8 penicillin-binding protein activator compare
BWI76_RS05645 +0.5 2.5 fructuronate reductase compare
BWI76_RS13495 +0.5 1.1 hypothetical protein compare
BWI76_RS11460 +0.5 2.2 DUF441 family protein compare
BWI76_RS10505 +0.5 2.4 putative guanine/xanthin permease compare
BWI76_RS23325 +0.5 1.6 hypothetical protein compare
BWI76_RS00330 +0.5 3.1 molybdenum cofactor guanylyltransferase compare
BWI76_RS05235 +0.5 1.1 hypothetical protein compare
BWI76_RS20720 +0.5 1.2 hypothetical protein compare
BWI76_RS26245 +0.5 2.2 transcriptional regulator compare
BWI76_RS20180 +0.5 2.3 NADH-quinone oxidoreductase subunit C/D compare
BWI76_RS17380 +0.5 1.4 nitrate transporter component compare
BWI76_RS09490 +0.5 1.5 DNA-binding response regulator compare
BWI76_RS02690 +0.5 1.8 hypothetical protein compare
BWI76_RS19770 +0.5 1.5 bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase compare
BWI76_RS18575 +0.5 0.9 transcriptional regulator compare
BWI76_RS04050 +0.5 1.5 hydroxamate siderophore iron reductase FhuF compare
BWI76_RS01560 +0.5 2.1 Rsd/AlgQ family anti-sigma factor compare
BWI76_RS25205 +0.5 1.8 hypothetical protein compare
BWI76_RS26425 +0.5 4.0 zinc/cadmium/mercury/lead-transporting ATPase compare
BWI76_RS22020 +0.5 2.3 L-alanine exporter AlaE compare
BWI76_RS20190 +0.5 2.6 NADH-quinone oxidoreductase subunit A compare
BWI76_RS25215 +0.5 2.7 phospholipid-binding protein MlaC compare
BWI76_RS27875 +0.5 0.4 membrane protein compare
BWI76_RS10820 +0.5 1.3 iron uptake system protein EfeO compare
BWI76_RS15285 +0.5 2.1 stress protection protein MarC compare
BWI76_RS14865 +0.5 1.3 ribose ABC transporter permease compare
BWI76_RS15225 +0.5 3.1 DeoR family transcriptional regulator compare
BWI76_RS13490 +0.5 1.8 pyrimidine-specific ribonucleoside hydrolase RihA compare
BWI76_RS13920 +0.5 2.8 magnesium-translocating P-type ATPase compare
BWI76_RS04655 +0.5 1.6 shikimate dehydrogenase compare
BWI76_RS01535 +0.5 1.8 thiazole synthase compare
BWI76_RS16335 +0.5 1.2 division septum protein Blr compare
BWI76_RS13215 +0.5 1.0 type I glyceraldehyde-3-phosphate dehydrogenase compare
BWI76_RS08515 +0.5 1.4 acyl-CoA thioesterase YbgC compare
BWI76_RS01835 +0.5 1.7 chemotaxis protein CheW compare
BWI76_RS14170 +0.5 1.4 hypothetical protein compare
BWI76_RS15785 +0.5 1.8 replication protein compare
BWI76_RS21780 +0.5 1.9 S-(hydroxymethyl)glutathione synthase compare
BWI76_RS12335 +0.5 2.5 hypothetical protein compare
BWI76_RS23955 +0.5 3.3 LysR family transcriptional regulator compare
BWI76_RS06435 +0.5 1.4 MFS transporter compare
BWI76_RS09025 +0.5 1.5 GntR family transcriptional regulator compare
BWI76_RS13180 +0.5 1.9 multidrug transporter EmrA compare
BWI76_RS06045 +0.5 2.2 hypothetical protein compare
BWI76_RS17345 +0.5 2.7 nitrate/nitrite two-component system sensor histidine kinase NarX compare
BWI76_RS14090 +0.5 2.7 polyketide cyclase compare
BWI76_RS17470 +0.5 1.8 MerR family transcriptional regulator compare
BWI76_RS04995 +0.5 2.8 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
BWI76_RS19695 +0.5 1.4 membrane protein compare
BWI76_RS12155 +0.5 1.9 hypothetical protein compare
BWI76_RS11735 +0.5 1.3 PTS N,N'-diacetylchitobiose transporter subunit IIA compare
BWI76_RS13960 +0.5 1.5 urea ABC transporter periplasmic protein compare
BWI76_RS15865 +0.5 1.7 hypothetical protein compare
BWI76_RS11435 +0.5 1.2 hypothetical protein compare
BWI76_RS23670 +0.4 2.8 alkaline phosphatase compare
BWI76_RS14665 +0.4 1.3 minor fimbrial subunit YfcQ compare
BWI76_RS15860 +0.4 1.4 adenine-specific DNA methyltransferase compare
BWI76_RS17325 +0.4 1.5 nitrate reductase molybdenum cofactor assembly chaperone compare
BWI76_RS09475 +0.4 1.4 putrescine ABC transporter permease PotI compare
BWI76_RS16135 +0.4 2.0 acetyl-CoA acetyltransferase compare
BWI76_RS21895 +0.4 2.6 amino acid ABC transport system periplasmic amino acid-binding component compare
BWI76_RS04970 +0.4 1.4 ABC transporter permease compare
BWI76_RS15620 +0.4 1.0 hypothetical protein compare
BWI76_RS12545 +0.4 1.2 hypothetical protein compare
BWI76_RS10375 +0.4 1.6 polar amino acid ABC transporter inner membrane subunit compare
BWI76_RS18605 +0.4 0.9 oxidoreductase molybdopterin-binding protein compare
BWI76_RS08835 +0.4 2.3 molybdopterin guanine dinucleotide biosynthesis protein MoaE compare
BWI76_RS10500 +0.4 1.0 flavoprotein monooxygenase compare
BWI76_RS23125 +0.4 1.0 propanediol dehydratase small subunit compare
BWI76_RS16280 +0.4 2.5 mannose-6-phosphate isomerase compare
BWI76_RS25080 +0.4 1.7 tRNA pseudouridine(55) synthase compare
BWI76_RS01000 +0.4 1.2 peptidyl-prolyl cis-trans isomerase compare
BWI76_RS11030 +0.4 2.0 MFS transporter compare
BWI76_RS16120 +0.4 1.4 4-carboxymuconolactone decarboxylase compare
BWI76_RS05440 +0.4 3.0 hydroxyacylglutathione hydrolase compare
BWI76_RS01725 +0.4 1.7 PTS mannose/fructose/sorbose family transporter subunit IID compare
BWI76_RS03190 +0.4 0.8 hypothetical protein compare
BWI76_RS01225 +0.4 2.3 magnesium transporter CorA compare
BWI76_RS06880 +0.4 2.1 biopolymer transport protein ExbD/TolR compare
BWI76_RS07325 +0.4 2.3 aminoimidazole riboside kinase compare
BWI76_RS02680 +0.4 0.9 EamA family transporter compare
BWI76_RS24625 +0.4 1.8 hypothetical protein compare
BWI76_RS17390 +0.4 0.8 DsrE family protein compare
BWI76_RS06080 +0.4 1.7 taurine dioxygenase compare
BWI76_RS12825 +0.4 1.2 hypothetical protein compare
BWI76_RS11195 +0.4 1.6 multiple stress resistance protein BhsA compare
BWI76_RS08820 +0.4 1.3 molybdenum cofactor biosynthesis protein compare
BWI76_RS19090 +0.4 3.0 polysaccharide export protein Wza compare
BWI76_RS16030 +0.4 1.0 malonate decarboxylase acyl carrier protein compare
BWI76_RS11365 +0.4 1.5 iron ABC transporter compare
BWI76_RS15980 +0.4 1.1 lysine transporter LysE compare
BWI76_RS04975 +0.4 1.9 PTS fructose subfamily transporter subunit IIA compare
BWI76_RS26235 +0.4 1.6 gluconate transporter compare
BWI76_RS27745 +0.4 1.7 PTS sugar transporter subunit IIB compare
BWI76_RS06335 +0.4 1.0 nucleoside-specific channel-forming protein Tsx compare
BWI76_RS24065 +0.4 1.5 deoxyribonuclease I compare
BWI76_RS18335 +0.4 2.7 DNA-binding response regulator compare
BWI76_RS12605 +0.4 2.1 hypothetical protein compare
BWI76_RS17675 +0.4 1.2 hypothetical protein compare
BWI76_RS04565 +0.4 1.6 bifunctional tRNA pseudouridine(32) synthase/ribosomal large subunit pseudouridine synthase RluA compare
BWI76_RS21345 +0.4 1.6 sigma-E factor regulatory protein RseB compare
BWI76_RS18240 +0.4 0.7 L-arabinose ABC transporter permease AraH compare
BWI76_RS05800 +0.4 1.2 phage transcriptional activator, Ogr/delta compare
BWI76_RS07785 +0.4 1.1 transcriptional regulator compare
BWI76_RS02635 +0.4 1.1 3-keto-L-gulonate-6-phosphate decarboxylase compare
BWI76_RS26615 +0.4 2.5 gluconate:H+ symporter (from data) compare
BWI76_RS14700 +0.4 3.0 hypothetical protein compare
BWI76_RS10510 +0.4 1.4 OHCU decarboxylase compare
BWI76_RS25415 +0.4 1.7 GntR family transcriptional regulator compare
BWI76_RS27825 +0.4 1.7 hypothetical protein compare
BWI76_RS25690 +0.4 2.8 large-conductance mechanosensitive channel compare
BWI76_RS07645 +0.4 1.1 short-chain dehydrogenase/reductase compare
BWI76_RS16970 +0.4 2.5 murein L,D-transpeptidase compare
BWI76_RS18695 +0.4 1.4 GntR family transcriptional regulator compare
BWI76_RS17795 +0.4 1.6 ribonuclease D compare
BWI76_RS06410 +0.4 2.1 YajQ family cyclic di-GMP-binding protein compare
BWI76_RS22940 +0.4 1.7 DNA-binding transcriptional activator FucR compare
BWI76_RS17205 +0.4 2.3 cardiolipin synthase A compare
BWI76_RS12150 +0.4 1.4 DNA damage-inducible protein I compare
BWI76_RS05075 +0.4 0.6 type II secretion system protein GspG compare
BWI76_RS26580 +0.4 2.0 universal stress protein A compare
BWI76_RS21980 +0.4 1.7 hypothetical protein compare
BWI76_RS15955 +0.4 1.6 transcriptional regulator compare
BWI76_RS10975 +0.4 1.7 N-methyltryptophan oxidase compare
BWI76_RS11190 +0.4 1.3 putative TetR/AcrR family transcriptional regulatory protein compare
BWI76_RS27365 +0.4 1.0 hypothetical protein compare
BWI76_RS13755 +0.4 0.7 hypothetical protein compare
BWI76_RS10525 +0.4 1.6 cytosine/purines uracil thiamine allantoin permease compare
BWI76_RS13605 +0.4 1.6 porin compare
BWI76_RS10910 +0.4 1.6 hypothetical protein compare
BWI76_RS23895 +0.4 0.4 Xaa-Pro aminopeptidase compare
BWI76_RS17980 +0.4 0.9 RNA chaperone ProQ compare
BWI76_RS05430 +0.4 1.8 UbiE/COQ5 family methyltransferase compare
BWI76_RS20805 +0.4 2.0 phosphate acetyltransferase compare
BWI76_RS10345 +0.4 3.1 MFS transporter compare
BWI76_RS04370 +0.4 3.1 FldA family protein compare
BWI76_RS10580 +0.4 1.5 amino acid ABC transporter permease compare


Specific Phenotypes

For 1 genes in this experiment

For exudates Brachypodium distachyon 13-day exudates in Klebsiella michiganensis M5al

For exudates Brachypodium distachyon 13-day exudates across organisms