Experiment set8IT080 for Klebsiella michiganensis M5al

Compare to:

RCH2_defined_glucose with MS_media 0.5x

200 most important genes:

  gene name fitness t score description  
BWI76_RS21475 -9.5 -6.6 bifunctional chorismate mutase/prephenate dehydrogenase compare
BWI76_RS04465 -7.1 -6.9 carbamoyl-phosphate synthase small subunit compare
BWI76_RS04160 -6.9 -4.8 phosphoserine phosphatase compare
BWI76_RS07070 -6.8 -6.7 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS02995 -6.8 -8.9 aspartate carbamoyltransferase compare
BWI76_RS04470 -6.8 -11.4 carbamoyl phosphate synthase large subunit compare
BWI76_RS20895 -6.7 -7.5 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS26085 -6.6 -4.5 3-dehydroquinate synthase compare
BWI76_RS27385 -6.4 -8.8 orotate phosphoribosyltransferase compare
BWI76_RS20965 -6.4 -4.8 phosphoribosylformylglycinamidine cyclo-ligase compare
BWI76_RS23920 -6.3 -5.3 D-3-phosphoglycerate dehydrogenase compare
BWI76_RS21265 -6.1 -14.8 phosphoribosylformylglycinamidine synthase compare
BWI76_RS01615 -6.1 -13.5 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS11965 -6.0 -5.1 orotidine-5'-phosphate decarboxylase compare
BWI76_RS01610 -6.0 -5.8 phosphoribosylamine--glycine ligase compare
BWI76_RS23360 -6.0 -5.8 diaminopimelate decarboxylase compare
BWI76_RS23365 -5.9 -8.1 LysR family transcriptional regulator compare
BWI76_RS09910 -5.9 -16.0 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS04645 -5.8 -8.5 3-dehydroquinase compare
BWI76_RS09755 -5.7 -9.6 phosphoserine transaminase compare
BWI76_RS00835 -5.4 -16.5 phosphoenolpyruvate carboxylase compare
BWI76_RS04250 -5.3 -11.4 homoserine kinase compare
BWI76_RS18950 -5.3 -5.6 imidazole glycerol phosphate synthase cyclase subunit compare
BWI76_RS05835 -5.1 -4.1 gamma-glutamyl-phosphate reductase compare
BWI76_RS18930 -5.1 -7.3 histidinol-phosphate transaminase compare
BWI76_RS02735 -5.0 -7.7 3'(2'),5'-bisphosphate nucleotidase CysQ compare
BWI76_RS00400 -4.9 -3.3 glutamine synthetase compare
BWI76_RS20350 -4.8 -9.7 amidophosphoribosyltransferase compare
BWI76_RS01200 -4.7 -4.1 diaminopimelate epimerase compare
BWI76_RS22760 -4.5 -11.4 sulfite reductase subunit beta compare
BWI76_RS10990 -4.5 -2.4 dihydroorotase compare
BWI76_RS18920 -4.4 -4.7 ATP phosphoribosyltransferase compare
BWI76_RS07065 -4.4 -9.4 5-(carboxyamino)imidazole ribonucleotide synthase compare
BWI76_RS04255 -4.3 -12.9 threonine synthase compare
BWI76_RS22755 -4.3 -8.7 phosphoadenosine phosphosulfate reductase compare
BWI76_RS00805 -4.1 -4.8 5,10-methylenetetrahydrofolate reductase compare
BWI76_RS25645 -4.1 -7.9 shikimate dehydrogenase compare
BWI76_RS03010 -4.0 -10.5 ornithine carbamoyltransferase compare
BWI76_RS05840 -4.0 -7.0 glutamate 5-kinase compare
BWI76_RS00850 -4.0 -9.6 acetylglutamate kinase compare
BWI76_RS00975 -4.0 -9.3 dihydroxy-acid dehydratase compare
BWI76_RS00855 -3.9 -10.3 argininosuccinate lyase compare
BWI76_RS25115 -3.8 -10.7 argininosuccinate synthase compare
BWI76_RS00990 -3.8 -10.2 ketol-acid reductoisomerase compare
BWI76_RS04245 -3.8 -14.1 bifunctional aspartate kinase/homoserine dehydrogenase I compare
BWI76_RS18925 -3.7 -7.9 histidinol dehydrogenase compare
BWI76_RS22765 -3.7 -11.8 sulfite reductase subunit alpha compare
BWI76_RS23230 -3.6 -2.5 exodeoxyribonuclease V subunit beta compare
BWI76_RS23240 -3.6 -3.4 exonuclease V subunit gamma compare
BWI76_RS26000 -3.4 -7.4 aspartate aminotransferase family protein compare
BWI76_RS00845 -3.4 -11.2 N-acetyl-gamma-glutamyl-phosphate reductase compare
BWI76_RS27390 -3.3 -5.0 ribonuclease PH compare
BWI76_RS04240 -3.3 -4.5 thr operon leader peptide compare
BWI76_RS18935 -3.3 -9.3 bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase compare
BWI76_RS00785 -3.3 -8.2 cystathionine gamma-synthase compare
BWI76_RS08385 -3.2 -2.5 citrate (Si)-synthase compare
BWI76_RS04670 -3.2 -8.3 3-isopropylmalate dehydratase large subunit compare
BWI76_RS01800 -3.2 -5.5 glucose-6-phosphate isomerase compare
BWI76_RS09760 -3.1 -2.7 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS01655 -3.1 -11.1 homoserine O-succinyltransferase compare
BWI76_RS09645 -3.1 -2.7 thioredoxin-disulfide reductase compare
BWI76_RS18940 -3.1 -4.5 imidazole glycerol phosphate synthase subunit HisH compare
BWI76_RS00965 -3.1 -2.1 acetolactate synthase 2 small subunit compare
BWI76_RS18955 -3.0 -8.3 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase compare
BWI76_RS20435 -3.0 -2.2 chorismate synthase compare
BWI76_RS04665 -3.0 -17.3 3-isopropylmalate dehydratase small subunit compare
BWI76_RS23220 -2.8 -7.9 amino-acid N-acetyltransferase compare
BWI76_RS00980 -2.7 -10.0 PLP-dependent threonine dehydratase compare
BWI76_RS20355 -2.6 -5.0 colicin V production protein compare
BWI76_RS04675 -2.5 -6.0 3-isopropylmalate dehydrogenase compare
BWI76_RS11840 -2.5 -4.6 tryptophan synthase subunit alpha compare
BWI76_RS24285 -2.2 -8.4 cystathionine beta-lyase compare
BWI76_RS04680 -2.1 -8.5 2-isopropylmalate synthase compare
BWI76_RS04685 -2.1 -6.1 putative leucine operon leader peptide compare
BWI76_RS11850 -2.1 -8.2 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase compare
BWI76_RS11845 -2.0 -4.7 tryptophan synthase subunit beta compare
BWI76_RS21480 -2.0 -6.3 phospho-2-dehydro-3-deoxyheptonate aldolase compare
BWI76_RS11855 -2.0 -7.2 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase compare
BWI76_RS09660 -2.0 -1.8 DNA translocase FtsK compare
BWI76_RS05450 -1.8 -2.0 ribonuclease HI compare
BWI76_RS21465 -1.8 -2.5 bifunctional chorismate mutase/prephenate dehydratase compare
BWI76_RS05200 -1.7 -2.7 bifunctional uridylyltransferase/uridylyl-removing protein compare
BWI76_RS01210 -1.7 -3.2 tyrosine recombinase XerC compare
BWI76_RS00985 -1.7 -5.9 transcriptional regulator IlvY compare
BWI76_RS11860 -1.6 -6.0 anthranilate synthase component I compare
BWI76_RS22690 -1.6 -1.7 adenylyl-sulfate kinase compare
BWI76_RS26055 -1.6 -6.2 siroheme synthase compare
BWI76_RS20650 -1.5 -2.3 phosphoenolpyruvate--protein phosphotransferase compare
BWI76_RS22700 -1.5 -4.1 sulfate adenylyltransferase subunit 2 compare
BWI76_RS25060 -1.4 -2.7 lipoprotein NlpI compare
BWI76_RS18165 -1.4 -1.2 NUDIX pyrophosphatase compare
BWI76_RS20440 -1.3 -1.1 50S ribosomal protein L3 N(5)-glutamine methyltransferase compare
BWI76_RS22805 -1.3 -5.6 GTP diphosphokinase compare
BWI76_RS21140 -1.3 -1.8 molecular chaperone HscA compare
BWI76_RS15850 -1.3 -0.8 DUF1317 domain-containing protein compare
BWI76_RS15840 -1.3 -3.1 prophage protein compare
BWI76_RS00960 -1.3 -6.6 acetolactate synthase 2 catalytic subunit compare
BWI76_RS21370 -1.2 -1.7 ATP-dependent RNA helicase SrmB compare
BWI76_RS07740 -1.2 -1.3 Fe2+-enterobactin ABC transporter substrate-binding protein compare
BWI76_RS00390 -1.2 -3.8 two-component system sensor histidine kinase NtrB compare
BWI76_RS04510 -1.2 -2.0 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) compare
BWI76_RS04530 -1.2 -2.2 peptidylprolyl isomerase SurA compare
BWI76_RS15830 -1.2 -3.5 hypothetical protein compare
BWI76_RS16000 -1.2 -1.4 multidrug transporter subunit MdtI compare
BWI76_RS01630 -1.1 -1.6 16S ribosomal RNA compare
BWI76_RS18360 -1.1 -1.4 aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase family protein compare
BWI76_RS11235 -1.1 -1.2 hypothetical protein compare
BWI76_RS14065 -1.1 -2.0 hypothetical protein compare
BWI76_RS09655 -1.0 -2.4 leucine-responsive regulatory protein compare
BWI76_RS12790 -1.0 -1.3 lactate dehydrogenase compare
BWI76_RS06400 -1.0 -2.6 oxidative-stress-resistance chaperone compare
BWI76_RS13645 -1.0 -1.5 N-hydroxyarylamine O-acetyltransferase compare
BWI76_RS05235 -1.0 -1.4 hypothetical protein compare
BWI76_RS25335 -1.0 -3.2 stringent starvation protein A compare
BWI76_RS16275 -1.0 -2.5 fumarate hydratase FumA compare
BWI76_RS22695 -1.0 -3.2 sulfate adenylyltransferase compare
BWI76_RS02410 -1.0 -1.6 EF-P beta-lysylation protein EpmB compare
BWI76_RS14505 -1.0 -1.2 salicylate synthase Irp9 compare
BWI76_RS23265 -1.0 -2.3 hypothetical protein compare
BWI76_RS21450 -1.0 -2.6 23S rRNA pseudouridine(1911/1915/1917) synthase compare
BWI76_RS23480 -1.0 -6.0 EAL domain-containing protein compare
BWI76_RS07725 -0.9 -1.2 iron-enterobactin transporter permease compare
BWI76_RS19010 -0.9 -2.3 polysaccharide pyruvyl transferase yvff compare
BWI76_RS20995 -0.9 -2.2 RNA degradosome polyphosphate kinase compare
BWI76_RS15825 -0.9 -1.3 hypothetical protein compare
BWI76_RS10950 -0.9 -2.4 MFS transporter compare
BWI76_RS16355 -0.9 -1.7 electron transport complex subunit A compare
BWI76_RS22620 -0.9 -1.4 3-octaprenyl-4-hydroxybenzoate carboxy-lyase compare
BWI76_RS25065 -0.9 -2.7 polyribonucleotide nucleotidyltransferase compare
BWI76_RS11810 -0.9 -1.8 outer membrane protein OmpW compare
BWI76_RS13945 -0.9 -3.4 lysine exporter protein LysE/YggA compare
BWI76_RS23140 -0.8 -1.9 carboxysome shell protein compare
BWI76_RS21285 -0.8 -1.5 HAD family hydrolase compare
BWI76_RS00345 -0.8 -1.0 protein disulfide oxidoreductase DsbA compare
BWI76_RS23020 -0.8 -1.9 cobalamin biosynthesis protein CbiQ compare
BWI76_RS08885 -0.8 -2.4 transcriptional regulator compare
BWI76_RS20640 -0.8 -1.7 cysteine synthase A compare
BWI76_RS04100 -0.8 -2.4 peptide chain release factor 3 compare
BWI76_RS08375 -0.8 -1.8 pyroglutamyl-peptidase I compare
BWI76_RS00385 -0.8 -4.1 nitrogen assimilation regulatory protein compare
BWI76_RS20940 -0.8 -1.3 uracil/xanthine transporter compare
BWI76_RS19375 -0.8 -1.1 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase compare
BWI76_RS15435 -0.8 -1.0 hypothetical protein compare
BWI76_RS12235 -0.8 -1.7 hypothetical protein compare
BWI76_RS09650 -0.8 -3.1 hypothetical protein compare
BWI76_RS01195 -0.8 -0.8 membrane protein compare
BWI76_RS18135 -0.8 -2.5 zinc ABC transporter ATP-binding protein ZnuC compare
BWI76_RS01330 -0.7 -2.3 twin-arginine translocase subunit TatC compare
BWI76_RS26095 -0.7 -1.4 shikimate kinase compare
BWI76_RS11900 -0.7 -0.9 cob(I)yrinic acid a,c-diamide adenosyltransferase compare
BWI76_RS06595 -0.7 -1.6 hypothetical protein compare
BWI76_RS12940 -0.7 -2.3 AraC family transcriptional regulator compare
BWI76_RS16920 -0.7 -1.3 3-(2,3-dihydroxyphenyl)propionate dioxygenase compare
BWI76_RS01795 -0.7 -3.1 hypothetical protein compare
BWI76_RS13495 -0.7 -1.0 hypothetical protein compare
BWI76_RS17110 -0.7 -1.3 vitamin B12 ABC transporter permease BtuC compare
BWI76_RS15775 -0.7 -1.6 replication protein compare
BWI76_RS26890 -0.7 -1.3 hypothetical protein compare
BWI76_RS19025 -0.7 -4.2 phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) compare
BWI76_RS17095 -0.7 -2.8 vitamin B12 ABC transporter ATP-binding protein BtuD compare
BWI76_RS19705 -0.7 -1.9 kinase compare
BWI76_RS06295 -0.7 -2.4 S-adenosylmethionine:tRNA ribosyltransferase-isomerase compare
BWI76_RS15680 -0.7 -1.6 hypothetical protein compare
BWI76_RS01890 -0.7 -2.4 transcriptional regulator Zur compare
BWI76_RS08360 -0.7 -1.1 LamB/YcsF family protein compare
BWI76_RS04605 -0.7 -1.1 thiamine ABC transporter ATP-binding protein compare
BWI76_RS26875 -0.7 -1.9 dipeptide ABC transporter permease DppC compare
BWI76_RS16090 -0.7 -0.6 two-component system response regulator DcuR compare
BWI76_RS16935 -0.7 -0.8 shikimate dehydrogenase compare
BWI76_RS19685 -0.7 -2.3 lysine transporter compare
BWI76_RS17945 -0.6 -1.1 hypothetical protein compare
BWI76_RS13380 -0.6 -1.5 hypothetical protein compare
BWI76_RS01275 -0.6 -3.4 LysR family transcriptional regulator compare
BWI76_RS01685 -0.6 -4.8 methionine synthase compare
BWI76_RS25505 -0.6 -3.2 RNase E specificity factor CsrD compare
BWI76_RS19215 -0.6 -1.2 proline-specific peptidase compare
BWI76_RS16840 -0.6 -2.0 ABC transporter compare
BWI76_RS10365 -0.6 -2.3 class IV aminotransferase compare
BWI76_RS09530 -0.6 -0.8 hypothetical protein compare
BWI76_RS15720 -0.6 -1.7 prophage protein NinE compare
BWI76_RS06745 -0.6 -1.3 N-acetyltransferase GCN5 compare
BWI76_RS14800 -0.6 -1.6 non-heme chloroperoxidase compare
BWI76_RS24720 -0.6 -1.9 hypothetical protein compare
BWI76_RS12200 -0.6 -1.2 hypothetical protein compare
BWI76_RS06525 -0.6 -2.6 ATP-dependent Clp protease proteolytic subunit compare
BWI76_RS14825 -0.6 -1.2 dienelactone hydrolase family protein compare
BWI76_RS22640 -0.6 -1.2 hypothetical protein compare
BWI76_RS16235 -0.6 -2.3 membrane protein compare
BWI76_RS16645 -0.6 -1.2 DeoR family transcriptional regulator compare
BWI76_RS17190 -0.6 -1.4 TonB system transport protein TonB compare
BWI76_RS03040 -0.6 -2.0 leucyl aminopeptidase compare
BWI76_RS14540 -0.6 -2.1 yersiniabactin biosynthetic protein YbtU compare
BWI76_RS15900 -0.6 -1.9 hypothetical protein compare
BWI76_RS20910 -0.6 -3.9 glycine cleavage system transcriptional repressor compare
BWI76_RS04060 -0.6 -1.6 hypothetical protein compare
BWI76_RS18270 -0.6 -1.4 hypothetical protein compare
BWI76_RS24810 -0.6 -1.6 hypothetical protein compare
BWI76_RS14670 -0.6 -0.9 hypothetical protein compare
BWI76_RS20720 -0.6 -1.0 hypothetical protein compare
BWI76_RS03105 -0.6 -0.8 myo-inosose-2 dehydratase compare


Specific Phenotypes

For 2 genes in this experiment

For carbon source MS_media in Klebsiella michiganensis M5al

For carbon source MS_media across organisms